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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13481_c0_seq1
Scaffold_idBomo_Chr14
NCBI non-redundant
(nr)		Transposon_Ty3-G_Gag-Pol_polyprotein_[Papilio_machaon]
Ontology
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:10.54 TPM:10.60
ORF EntryO_BomoSK14227_complete:A_BomoSK_comp13481_c0_seq1
Sequence
(Nucleotide)
GGTGTATGGCTCTAATAAAGAATAAAAAAAAAAAAAAAAAAAACGATGTTCACATCCCTA
GATTTAGCATCCGGCTACTACCAGATACCAATAGAAGAAGGTTCGCGTCACAAAACCGCA
TTCGTGACTCCAGACGGTCAATTTGAATATAATCGGATGCCATTTGGATTGGTGAATGCA
CCAGCGGTATTTCAAAGAACTATAAATACTATCCTGGCGGAAGCCAAAATTAAGTATGCC
CTTGTTTATATGGATGACATATTAATTCCCTCAAAGAATTTTGAAGAAGGAATGACCAGA
TTAACGGAAGTACTGGAACTTTTGCGAAGTGGAGGGCTCACTTTGAAAATGAGCAAATGT
AGCTTCTTCCTCGACGAGATTGACTTTCTTGGATTTGAGGTTAGCGCAAAAGGTATTCGA
CCAGGGTGCAGAAAGACCGAAGCGGTGTCTAATTTTCCTAAGCCCAAAAACCAACATGAA
CTACGTCAATTTTTAGGATTATCGGGGTTTTTTAGAAGATTTATCAAAAACTACGCATTG
GTAGCTGCGCCTCTAACTGAACTTCTTAAGAAGGATCAAGAGTGGATATGGAACGAACAA
AGAGAAAAATCCTTCACACACATCAAGGAGCTCTTGCATAAACGACCCTTGCTCGCTCTG
TATGATCCACTGGCAGAGACTGAACTCCATACCGACGCTAGTAAACAAGGCTTAGCTGGT
ATCTTACTTCAACGTAACGAGAAAGGCGCCCGGCAGCCAGTGTCTTATTTTAGTCGAAAA
ACCACCCCAGATGAACAGCGATACCATTCCTATGAACTAGAAACCTTAGCTATTATAGCG
TCATTAAATCGGTTTAGAATCTACCTTCTCGGCATACCTTTTACTATAATTACCGACTGT
AGCGCGATCCGCGCTACGCTTATAAAAAGGGACTTGGTGCCTCGTATAGCGAGGTGGTGG
ATCCAACTCCAAGAATATGATTGCACTATTGAATATAGACCCGGATCGAGGATGTCCCAC
GTCGACGCGCTCAGTCGTAATCCGATAGACACCCTAACAAATGAGGATCACGTCCTTGAC
GTACTAACCACTGAAACGGACGAACAAGATTGGATCACCACCGTACAATCTGCAGACGAT
GAAATTGCACAAATAAGGAATATTTTATGTAATCATGATACCGAGAATATAGCGAACGTA
TTTAAACATTTCAAATTAAAAAATGGGCGTATCTACCGTATTGTGGGCGATGAGATAAAG
TGGGTCGTTCCAAAAGGGGCCCGGTGGCAGATCTTGAAGAGAAACCACGATGATGTCGGC
CATTACGGCTTTGAAAAGACTCTTGAACGTATAAGGAAACATTACTGGTTTGGACGCATG
AGGCGTTTCGTAAAGAAATACGTATCGGCTTGTCTAGAATGTGCTCATCACAAGGTACCA
GGGGGTAAACGTGAAGGAGAACTGCATCCCATTGAAAAGATCGGCGTGTCCTTCCACACA
ATCCACGCAGACCACCTAGGACCTTTTGTCAGGAGCAAAGCGGGGAACTGCTATATACTA
TCATTAATAGATAGTTTCACTAAATTTATAAATATCACTCCAGTCAAAAACACGAAATCA
GCGACTACAATCAAAGTCCTGAAAGACCACGTCAGTTTCTTCGGAGTCCCAACGCGCCTC
ATTACTGATAGGGGGTCTAGTTTCACCAGTAAAATGTTTAAAGACTTTACAAAAGATTGT
GGAATAAAACATATATTAAACGCTGTCGCGACCCCGAGGGCAAATGGTCAGATAGAAAGA
TTTAACCGAACCATAACAGAAGCATTAGCTACTTCGAATCATGGCCGTGATGAACGATGT
TGGGACGAACGGATTCACGATATACAAATAGGTCTGAACACGACAATCCACAAGACAACG
CAAAAGTCGCCATCCGAACTACTGTTCGGATTTAATATAAACCATAGAGCGGAAGGAATT
TTGAGCACAATAATAAATGACACGCTTAATATAATACCACTAGATGAGTTAGACTCCGTG
AGAGATAATGTTTTGAAACGCATGGAAATTCAACAAGAAAAAGATTCTGAGCGATTCAAT
AAAAATAGAAAACAGTGTAAAAAGTATGAAGTAGGAGATCTAATCCGAATAGAAAGGCAT
GTGTCCAACGATGGTCACCCAAAGAAACTTTTAATGAAATATCAGGGTCCTTACCGCATC
TTGAAAGTCTTGGAACACGATAGGTTTTTAGTCGAAGACACTCCGTTGTCTCGTAAGGGC
GGTCGTCGTTACGAAGGTGTTGTCGCCATAGACAAAATTCAACCCTGGACAAGCTTTAAT
CGAAACTTCGATGATGACTCAAGCGAAGACGATGACGAGGATGACAAAGACAATGATGAT
GAAGACAGGAAGGATCAAGCGGGTAATTGACGTAGATGTAGGCAGCAGTGATTAGAAGTG
ATTAGAATTAGGCAGAAGTGATTAGAATAGCAATGTAACCAGTAACGTTAATGCTAATGA
GATTCGCCTCGATTAAAAGTTGAGTCCGTCATAATAATGTAATACTTTAACTATGTTGTA
AGGCATTGCAAGTAGACAGGAAGAGAGTGGTTGTTCCTGTATAACATACAAGCATCACGA
AGGGACTTGTGATATTGCAGGAAGGCCGAGCTGTTAGGATCATTTTATTCAAATTACCTA
ATTAGAAACATAGTAAAATATTAATAGCAAACTCTGTTGAAGTATGTTTAAAATATATTT
ATTTAGAATCAATCCTCGTGCCCATTATTTATGTAAATATTAAAAGTAGGAAATAATAAC
AGACTAAGACTTATGATTATTTTATAACTTAAATTCTAATTTCATAACTATCCTAAATTT
TGTTGACTTCCGGCCTGGCACAAAGAGGCGGGGCGTGATGCACGCAAAATGGCGAACGAC
ACACTGATTTAGCGAGGACGGAAGCAAGACGTACTTTACAAAAGCGTATCGATTAAGACA
ATTAGTGTACTTTAAAACCTATTCAAAGTTGTGGAAATAAAGGAAGTGTAATCAAACAGC
ATTTGGATTGTTTTTTTTTGGTGAAAGCCAAAAGTTCAGAAGCGGGATCACCAAGAATAC
ATAAAATTTTCTAAAGCGTCCACAAAATGTCCAGAAATATGGAAGGAGACACCCGAGGTC
AAGGGTCGGAATTCAGAGCTGCCCGAGGTCAAGGGTCGGAGTTCGAAGTCGCCCGAGGTC
AAGGGCTGGAATTAGAAGCCGCCCGAGGTCGAGGGTCGGAATTAGAAGTTGCCCG
(3295 bp)

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