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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13480_c0_seq6
Scaffold_idBomo_Chr1
NCBI non-redundant
(nr)		PREDICTED:_basement_membrane-specific_heparan_sulfate_proteoglycan_core_protein_isoform_X9_[Papilio_machaon]
Ontology
GO:0001523 P retinoid metabolic process
GO:0001525 P angiogenesis
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005604 C basement membrane
GO:0005615 C extracellular space
GO:0005796 C Golgi lumen
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0006024 P glycosaminoglycan biosynthetic process
GO:0006027 P glycosaminoglycan catabolic process
GO:0008022 F protein C-terminus binding
GO:0022617 P extracellular matrix disassembly
GO:0030198 P extracellular matrix organization
GO:0030203 P glycosaminoglycan metabolic process
GO:0031012 C extracellular matrix
GO:0042157 P lipoprotein metabolic process
GO:0043202 C lysosomal lumen
GO:0044267 P cellular protein metabolic process
GO:0046872 F metal ion binding
GO:0070062 C extracellular exosome
Transcript
Level		FPKM:57.47 TPM:57.81
ORF EntryO_BomoSK14205_complete:A_BomoSK_comp13480_c0_seq6
Sequence
(Nucleotide)
AGTCAACCTGGAAATCAAGACATCAGTCCTGGAGGTGGAAGCCCATACAATCCTGAACCA
GAAAACCAACCGGATAATAGAGAAGATCCCTCTGGCGGCCAACCTGGCGGTGAGTATAAT
CCTTATGGCCAGGGTGCTGGTGGACCAGACGATAGACGTCCACCGTATACTCAACCTGGA
AGTCAAGATGTAAGTCCAGGAGGTGGAAGCCCATACAATCCCGAATCAGGAAGTCAACCA
AATAACAGAGAAGATCCTTATGGTGGCCAGTCTGGTGGTGAATATGATCCTTATGGCCGG
GGTGCTGGTAGTCCAGATGATAGACGTCCTCCATACGGTCAATCTGGAAGCCAAGACATC
AGTCTTGGAGGTGGAATACCATACAACCCCGAATCAGTAAGGCAACCAGACAACAGAGAT
CCCTATGGCGGCCAATCCGGTGGTGAATATGATCCCTATGGGCGGGGCGTAAGTGGAACA
GACGACAGACGTCAACCTGGAAGCCAAGATGTTGGTCCAGGAGCTTCGGGTCAAGGCAAT
TCAAATCAACCAGAAAACCGGCCCTATCGTCCTGAAAGTGGCAATAGCGTTTATGAGACG
GGTGAGGGGCAATATGGATCTGGTAGTCAAAGAGGAGACAGAGGTCCCATTCCGTTAAAT
ATCAAAACATATCCGCAAGACCAGGAATCTGTCAGATACGGTGGTGATGTAGTGCTTCAG
TGCCGTGATGAAGGCCCTCGTCGTGCACCCGTGAGATGGATCCGAGAAGGTGGTAGGCCG
ATGAGGCCAAACTACCAGGAAAGAAAAGGACGACTGGAACTGTTTGGTGTTACCCCATCC
GATAGTGGTGTATACATATGTCAGGCACCATCTTATCTGAGACAGCCTGGTGCGGAAGTT
CGAGTTACTTTGGAAGTGGAGACGAGCCCTGTGACCGTGCGGCCAGTGTTCGGTGTTTGT
AAGCCACATGAAGCCACTTGCGGTAACGGGCAGTGCATACCAAAATCGGCTATTTGCAAC
TCTGTTTTCGACTGCGCTGATCATTCAGACGAAGATGGCTGCGGAGCCAGTGGCCAGTGC
GAACCGAACGAGTTTGTTTGCGCGAACCACAAGTGCATTCTTAAGACCTGGCGTTGTGAC
TCCGAGGACGACTGCGGCGATGGTTCTGATGAACTTAACTGTGGAACCCCAACTCCTGGA
AGCCCTTGCTTGGCGGTAGAATTCTCATGTGCTTCTAACAACCAATGTATTCCGAAGAGC
TTCCACTGTGACGGACAATCTGACTGCGTTGATGGCTCTGATGAAATCGGATGCGCTCAA
GTATATATCACGAAACCCCCGCAACCTTCATACGTGAGATTGAATCCGGGCGACTCGTTG
ACTCTAAGATGTGAGGCCGTTGGTGTACCTGTTCCACTAGTCTCGTGGCGTCTCAACTGG
GGACATGTTCCACCTCAATGCACCTTTACCAGTGACAACGGTATCGGAGTTTTGACATGT
CCAAACATGCAGCCCCAACATAGCGGTGCGTATTCGTGCGAGGCCATCAATAATAAGGCT
ACGACATTCGCGACACCGGACGCAATCGTACACGTGAATAGAACCGATCCTTGCCCCGTT
GGATATTTCAATAGCGATGCGCGTTCACAAAGCGAATGCATCCAGTGCTTCTGCTTCGGC
GAGTCCACGCAGTGTCGCAGCGCGGATCTGTTTACGTACAACATGCCGACTCCTCTTGGA
GAAGGCGGCACCAGATTCGTCACTGTCACTCATCAGGCCAGAGGCGACATCAGTATCGGC
GCCCCGATGAACAACGAATACTTCTATCAACCTTTGAGGAACGGAGCTACTGTGACCAGA
ATAGTCCCCGGAGACATGGGCTGGTTCAAAGATGCTCATCCATACGTGACCTTACCAGAA
ACCTACAACGGTAACCAGTTAACTTCATACGGTGGTCACATCAAATACACCATCTCGCCT
CACGGATCCGGATATGGCTCAGATGACACTGCACCAACCATAATCATCAAGGGGAAATAC
TTCACTCTGTTCCATTACTACCGCGGCGAGACGACTAAAACTATCAACATCGAAGCTCGT
TTGACTCCCGAGAACTGGCTGATTCTGGACGAAAACGGCGTTCAAGCGCCAGCGCAGAGA
TCGACCATCATGATGACATTGGATAACGTTGAAATGATACTCCTACGCGCTGATCTGCAC
AATGCGGGCGTGAACATCACAAACTTCGCAATGGAATCCGCGCAGCACATCAATGTTGGA
CTCGGTGCTGCGAGTCTGGTTGAAGAGTGTACTTGCCCGCCTGGATACGAAGGACTTTCA
TGCGAGAAATGCGCTGTTGGCTATACCCGTGATCAATCTGGGGAATGGTTGGGTACTTGC
GTCCGCGAGACCTGCCCGCCAGGTACTTACGGAGACCCAAGTAGCGGATATGCCTGCAAG
CCTTGCCCTTGCCCATTGACCAACAGGGAAAACAACTTCGCCTCCACTTGCGCACTGGGA
CCTGACGGCACTGTTCTCTGCAATTGCCGACCGGGCTACGAAGGCAGCAACTGTAATATC
TGTTCGTCTAACTACGAAGGAAATCCTCTCATGCCCGGAGACTCGTGTAAGCCTAAAGCT
ACCAAGAAATGCAACCCCGCCGGTACAAAGCAGGTTCGATTCCCTGACGAGTGTGCGTGC
AAGGTCAACGTACAAGGACGTCATTGTGACCAGTGCAAGAACGATTCATTCTATTTGTCT
GAAGACTTCAGTCACGGATGCGCTCTCTGCTTCTGCATGGGCGTGACCCAGCAATGTACA
AGCAGCAACCTAAGACGTACAACCACTGCCGTTCAATTCAACGTGCCCAACATTGTGAAC
CAAGTCAGGATTTACAACAGTTCAGCTGGTAGAGCACTCCAGGCTGTACGGTACAGTGTG
CCGGTTGAAACTGAAATGAGACCTCGGATCTACAGCGGCAGTATAGATGTACCGATACCG
GCAGTCCGGGACAACGTTTACTACTGGAGCTTACCAAACGGTTTCACCGGTGACTTGGTG
ACGGCCTACGGTGGTTACTTGAGGTACACTTTGGATAACGTTCCGATATCACTAAACAGC
GCTCCGGACGTACAGCTCATCAGTAACACGAACCCTACATTCCATTACACTGGCAACTTC
GTTCCATCATACGACGGAACCCTAAACGTTTCGATACACCTTCTAGAAACCGGTTGGAAA
AGGTTTGACGGCATAGAAATACCTCGAGAGCACTTCTTAGTGGCTTTAGTTGATGTTAAA
GCCATTCTTATAAAGGCTACGTATTCCCAAGACTCACCAATGGCCATTCCGATTAGTGCT
AGTATCGATAAGGCTGATCCTAATGGGGAGGGACCGGCCGCTCTACACGTCGAACAATGT
GTTTGTCCACCAGCTTATACTGGGACATCTTGTGAAACCTGCGCTCCTGGTTACACTAGG
GGTGATCGAACTATATACTTGAAAGAATGCATACCTTGCAACTGTAACGGTCATTCGAAT
ATGTGTAATCCAAAGACAGGGGTCTGTTACGACTGCAAGGATAACACGGATGGTCCCCAG
TGCGAACTCTGCAAGCCTGGATACGACAGAGACGGCTACGGCAACTGCGTTGAATCCGAT
AACTTCATCAGCACCCAGCAACCTTGCAGATGCAATCCTGACGGCGTCGAAGTACCATGT
GACGAGACTGGTACCTGTTCTTGCAAGCAGAACGTCGAAGGCGATTACTGTGACACCTGC
AGACCTGGAACCTACGGGCTGGATCGAAACAACCCTCAGGGATGTCTCTCGTGTTATTGT
TCCGGCGTCACCAGCGAATGTCACGAGGGCGTCCACTACAGTAGAATACCGATGGCCGCA
CCAGTTTTCGGCGAAAACAACGGCGGCTACAGCCTCACCGACTTAAACGCAGAAAAAATA
TACAACGAACATTTCGTACCAGTTCCCGATAAAAGCGAGCTCATGTACATATTCTCGTAC
CCACCCGAAAACGAACTGTATTGGTCGTTGCCCATCTTCCCTGGTAACAGAGTACTGTCA
TACGGTGGTTCGCTGTCGATAAGACAAGAGTTCCGAAGCAACAACGACGATGCGGTCTCA
CAGAGTGGCGTCGACGTTGTTCTTGTCGGCAAAGACGCTTCGGTGTACTGGTCCAACCCG
ACTCCGATCCGATCCGGCGTGCCTCTTAATTACCAGGTGATTTTGAGCGAAGACAACTGG
TTCCTATTGAACACGGCCACGCCGGTCACTCGAAACACCTTCATGAATGTCCTGAAGGAC
CTGAAGCGAGTGCTTGTTCGTGCTACTCTCGATCCCAACGTACTGTCGACATCTATCGCT
GACGTGTCCATGGACACTGCCACTATCATGTACGAACAAGATTTGCCTGTTGCAAAGGGA
GTCGAAATCTGCATGTGTCCAGCCGGATACACTGGCACCAGCTGCGAGAGTTGCTCGTCT
GGTTACTACAAGGACGTGTCTGGTCGGTGCCAACAGTGCTCATGTAACGGCCACGACTGT
CAACTCGACGCTTACGGACAGACTATATGTAACTGCCGCCCCCCTTACACCGGCTCTGAT
TGTTCTACCATCGCCGGTGAGCCCTCGGTGACTACACCGCCTAATCAACCGCCGCCCGAA
GTAACGGTGTTCGTGAGAATCATTGAGCCCTCGAACATAAGGGACCTGCACGTCGGTAGC
AGTGTCAACTACACTTGCCAGGCTCAGAGTCGCATTACGAACAGACTCCGCATCGCGTGG
TCCAAGGCTGATGGCTACTTGCCTCAAGGAAGGTCGCAGGTCGACGAAAACAGTGGTGTC
TTGCTCCTCACTAACCTTCAGACATCCGATAGCGGCCAGTACATCTGTCAGACAAGCGAC
GGATACTCAACGGCTCAAGATGTCGTCACTCTTATAGTGCCCGGTAATGATATGACCCCG
CCCACGGTATCGATTCGTCCCATCACAACTGACTACTATGAAGGTGATAGGATCGAACTA
GAATGCACGGCAACAGGAAACCCAGCTCCTTCTATCTCATGGCAGAGGAACTCTAGAAGA
CCTTTGCCGGCGTCCGCTGAATCGTTCGATGACCTCTTGATAATTGAAAGTGCACGCCAA
GAGGACTCTGGAGAATACAGGTGTATCGCTTCGAACGCAGTCAGTACAGAAGTTACTAAA
GTCACGATCAATGTACGTGCAAAACCATCTTGGCCATCTCAGGAGAAGCTAACAGTGTCT
CCGACATCTCTCTCAATTGACGAGGGCCAAAGTTCTAGGGCTGTCTGTACTGGCACACAA
GGCGTTCCGGCCGGCTCCATTGAGTGGATCAGGCAAGACAATGCTCCGTTCGTGGCAAAC
GTGCGGTCCGATAACGGGGTATTGTACATCGAATACGCTCGACCCGAGAACGATGGCATC
TATGTCTGCCAGAGCTCATCGTCGAATGTCTCGCCGCAATCGATTATCATAACAATCATA
CCGACATACAGTCCTGACCCCGCCAAAGAGTCGAACATCAGCATTTCGGTCGACAGCTTG
AAGGTACCGGCTGGTGGAAGCGGAAAGATCGACTGTAATCCTGACGGAACAATTCTACCT
ACCATCAAATGGAGCAAGCACGGCGGAGAATTCGGAAGCGAAACAAGCCAACGCGGCAAC
ACTCTCATAATCAACAACGCCAAAGAGGACGATCAAGGATACTATCTGTGCGAGGGAATC
GTTAACGGCGCCACCATAGCCAGCTCATACGTCTACGTCGAGATCGAAAGACGTGACCCT
CCGCAAGTGGACATCTGGCCCCAAGGCGAGAGAGCAGTCACTCTGGGCACAGAATACGAA
CTCATCTGCAGAGTTCTTGGTGGAGTCCCTGAGCCTGACGTCATGTGGAGTCGAGGTGGA
AGTAGACCGCTGTCCTCGTACGTCCACATCCGTCCGCAAAATACGCTCAAGTTTGACCAC
GTCGACGTGAACGACGAAGGCGAATACTTCTGCACGGCTACGAACGTGGCCGGTACAGCC
ACGGCTCGTTCCGTCATCAAAGTGAGATCGCCGCCGGTCATCACCATCACGCCGGCGAGC
TTCCTAGAGGCACCTCTCGGTAGTTCCGTGACAGTCGAATGCAGAGCCGACGGGTATCCC
CTACCAATGGTGTCCATAAAGACAAGCGCTGATCTCCGCGAGCTGGTGCGGCCCACACCC
AGCTTAGCAGCATTGAAGATACCGTCGATAGCTGAGCGCGACGACGGCGACTACATTTGC
ACGGCCACTTCTGCGGCCGGCACCATCGAGGAGCCGTTCGCGATACGCGTCAGCCGCGGA
GACATTGGAGTCGAATACGAATTTGGTGGAAGCGGCGATGACGAGTTCCCCGTTGACTAC
AACCCGAACAACCCGACCGGGAGATCAGACACGTTGATCGCTTATGAAAACGAACCAGAA
ATAACCATCTTCTGCAACAGCTCCGAGGGCTTCAACGCACGCTGGGACCGAGGAGACAGA
CAGTCACTGCAAAGAAATGCGTACCAAGTTGATTCACGTTTGATCATCCGTGGTGTATCC
AAGAGCGACTCCGGCTTGTACGTTTGTAGTTTGTACAACCGCTACACCGGAGAGGTGGTG
AAGGCGAACTACACTAATCTCCAAGTCGTGACCCGACCTAAGATAACGTTGAGGCCGGCC
AACCAAACGGTCCGACCTGGTCAGTCGCTCACGGTCGAGTGTCTCGTCGAAGGAGATGAA
ATTCTAGACGTCACTTGGAGATACGACAGGGAGCCTTCTAGACGTGTCGAAATCCGTGGC
CCAGTTCTGGTCTTTAACAACATCGAAGTGGAAGATGCCGGCATATACTATTGCATAGCT
CGCAGCCGTTACGGAAACGACACCGCCACCGCCAATGTCATCGTAACCGGAGCACGCGAC
GCAAATTCTGCTTCGCTGGTGTACATCGATCAGCCACGCAGAAAGTTCAGGGTTTCGGAG
AACGTCGAAGTTATCTGTAAGGGAAGATCTCGAGATGTCACCTTTAAGTGGGAGCGTCCC
GACACCAACTTGTACCTGGTTACTAATCCGTTCGGAGGCGGTTCTCGGCTGCTGATAAAC
AGCGTCCAAGAGTCCGACGCCGGCGTATATCGCTGCATCGGTACAGATCCATTCGGCATC
TCCTCGTACGACGATTTCGTTTTGGAGATCGAACCAGGTTCTGGCAACGCCGTCTATCCC
GGCAACAGAGACCTGCCCGTCACCCATTACTCAGCTCGGCTTCGCGAGGCCGTCGACATG
CCCTGCAACCACGACCTAAACGAGCCAGTCATTATCGAATGGAAACGAGAATATTCGCCG
CTTCCCGCTGAAGTTCGAAGCAATCAGCCAATCCTACACTTGGAAAGCGTGACAGAAGCG
GATGCCGGCATCTACGTCTGCCGCGTCAGCAACCAAGAAGTAACAGTTACAGCGAAGGCG
ATCCTTAGGGTGATCGGTGTGGTTCCACTCTTCAAAGGCAAGAGTTGGTTATCACTTCCA
CCTCTGAAAGACGCCTACAGACAATTCGACATTGAAGTCTACTTCAAACCCACCGATCTG
AACGGCCTGATCCTGTACAACAGCCAAAATCAGGGTAGAACCGGTGACTACATCGGTCTA
AGGTTATTGGATGGAGTACCAGAGTTCATATTCGACGCTGGTGCCGAACCTGTCATCGTC
AAAGGCGATAGACCATTGCAATTGAACGTCTGGCATTCAATAAGAGTCAGCAGGACCGAT
TCGAAGGTGACAATGGACGTCGACGATACAGGACCGTTCATAACTGATTCGGAAGAGCCT
TGGTCGGCCGTGCTGGAACTCAACCAGCCAATGTACATTGGAGGAGTTCCTGATATTGAC
CAACTACCAGCTGGACTTGCAGGATCCGATGGGTTCATCGGATGCGTGAGCACTCTGATC
CTCGGCCACGATGAGAAGAATATCATGCTCGACAGCTTGGAACAATACGGCGTCGACGAA
TGTCGGTCTTGCACTCCCAACCTTTGCGTCAATGACGGAATCTGTCAGGAGGCGCGTAAT
GAACGCGGCTACATGTGCATCTGCGCTCCTGGCTTCGCCGGCTGGAATTGCGAGAGAACC
GGGGAAGCTTGCAGAGCCGGCCTATGTGGACCTGGGAAATGCACCGAAACAGTGGACGGT
TACAGGTGTGCTTGTCCCATGTCTCACACAGGCAAGAACTGCGAGACGAAGCAACTGATC
GCGTACCCAGCTTTCACGGGGAGCGCATTCCTAGCTATCAACGCCCCGCCGCCGTCCCGT
TCCATGAAGATGTCGCTAAAGATCAGGGCAGCCACTCCAGTGACAGACGGCATCATCATG
TACTGCGCCGAGTCGTCGCGAGGATACGGCGGCTTCACCTCACTGACCGTTCGAAATGGA
AGACTTGAGTTCCGTTACGACCTTGGATCCGGAAGCACTCCCGTGGTGCTTACAAGTGAC
AGGCCATTGCCCGCGAACCAATGGATCGACATTCAGATCGCCCGCCTCGCGGATTCCGTC
TCCATGAAGATCAACTTAGTACGCAGCTTCGAGAGACGTTTGGATAGACCGGCTGAAAGC
CTCCGGTTCGAGACTCCGATGTTCGTGGGCGGAGTCGACGATTCCACCGTGGTAGTGAAC
CCTAACGCCGGCGTCAGCGGCGGCTTCAGCGGATGCATTAAGGATGTCGTGTTGAATAGC
AACGCCGTCGACATAAACTCATCGATTAAGTCGTCGAACATTCAAGAGTGCAACACGTAC
GACCGCGGCGATATTCAGGCGTCGGAGTCCTGCCAATGCGAAAACGGAGGTTCCTGTTCG
ACTGAATCCACCAATTGCATATGCCCACCCGGCTATACGGGATCGTACTGCGAGACGCGC
ATCGCATCCTACCTGATGTCGCCACCTCCGCCGGTAAACCCTTGCTCTCTGCACCCGTGT
CGCAACGGAGGAACCTGCAAACCAGATCGCAACTCTTGGATGAACCACACCTGCGACTGC
CCCTTGGGTTATGCCGGAGCCTCGTGTCAGATGCCTCTCGAATTAGGCCAGAGCGTGGGC
TTCAACGGCAACGGGTATGTAGAGTTGCCGGCCAGTTTGCTTCGCTATGATGAACTGGCC
TCGAACCCCGCTGTCATCGCCCTCGCTGTGCACACCACAAACGACGGAGTACTGGCCTAC
CAGAGGGAAGGACAAGCTCCGCCTAACGAAGGCGATTACTTCTTATTGAGAATTGAAAGA
GGTTTCGTCGTACTCGAATGGGACTTGGGCGGTGGTCTTTCTTCCATAGTTGTCGATGTT
CCTATTAACGACGGCGAGAGGCACCAGGTCGCCGCTCGTCTGCACGAGGACGGACACGCC
TGGCTCTCCGTCGACGGAGTTGACAAGAGCGCGCCGGCCACCGGTATCTCCAACGTCATG
AACGCTGACTCCAACATATACATCGGTGGAATACCAAGCTGGTTGAACATCCACGGATAT
CCAGGCTTCATCGGTTGCATTGAGAATGTTGAGACAACGGACAGCCACCGAGGATTGAAT
TTGCGAGACACCGCTGTGGCTGGTCGAAACACGCAGCTATGCAGAGACTCCTGATTTGAG
TTCATCGAAACGAAAACTACGAAATAATTAAGTAAAAAATCTCTACGCTTTCATAAAACT
GGAATGCATCGTATATTTTAAATATTATAATCTCATGATTACGCAATTAGAGGATCTATT
ATCTTAATTTACGATTGGTCGATCGTCAGATCACTATCAACTTACTACGATAGCAATAGT
TGAGTTATCTTCAAAGTTTAGTATACAAGTTCGATAATAGGTCCTCGGTTGTCATTTAAA
AATAAATATTCGTTGTGGTTTAGTATATAGAGAAATAATTGACATTATATATTACCGTTG
TATTTAGTATTAAGATTGATTCGATCACGACAATACGTCTATTATGTAGTCTATTAATTT
TTTATTAAATTAAGTGTTACTTATAATCAATTTAACGTGGTTGGACCTTCGTAATGGCTG
CGTCGAGTTGCGGGGTGCTCGGATGAGGAGCGGATTTGGTGCCATAAGAATTGAAAAGGA
AATTTAAAAACTAAATAATATAATAATGTAGCTAGGAGCTTGAATAATTGAAAATATTCT
ATTTTTTATTTTGTTTAAAGAAGTACTTTATCATTGTTTTCATTTCGGCTTGTTTATTAA
GTTGTTTCTGTTTGTTCAGTTTAATTCCAAATTATGAATTTACGTATAATTTCAATGCAC
CCAGTGATAAGATTTGTAATGTGCCAAACGTGTTTGAAAGGAATTTGTTTTTTACCTATT
TTTTCTTTTTTAGAGCACTGCCATTTTGTTTCGCTTTTATTCTTTAGGTAGTTGCATTTC
GCTTTTATTTAGAGCTATGTAATGTTTTTTTTTTTAACAAACATGTTACGTTGCTTACGA
TTAATTAACACGACTAGTTATCGCGATGGCATTTAATGTTTTCAATTTCGTTTTGTTTTT
TTCCTTCACGTGTTCTACTCGTATATAAAAACCGTTTTAATAATTTTTTAATACTAAAAT
AATCGTGAATGTACTGAATAATGTCGTTTATCAAGAATCTTGTATTCGTAATCTATGAAA
TTTCAAAATGAACGTTTTAAACGAACCTGTCTATATTGAATTTTATCTTTATGTATCCGC
TAAGTGAACAAATGCAAATTAACCATTAAGAAATGAAA
(10778 bp)

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