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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13459_c0_seq4
Scaffold_idBomo_Chr10
NCBI non-redundant
(nr)		PREDICTED:_UPF0505_protein_C16orf62_isoform_X3_[Bombyx_mori]
Ontology
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005829 C cytosol
GO:0006810 P transport
GO:0008565 F obsolete protein transporter activity
GO:0015031 P protein transport
GO:0030904 C retromer complex
GO:0042147 P retrograde transport, endosome to Golgi
Transcript
Level		FPKM:1.67 TPM:1.68
ORF EntryO_BomoSK14104_5prime_partial:A_BomoSK_comp13459_c0_seq4
Sequence
(Nucleotide)
TTTTTGCCTGGTGGTGAGAAAATTAGTACTTTTTCAGCCCTCATAAGACAGGTTTCAAAT
TTGAACGAAAAAGTTAAAAATAGACTGGAGCAATTGGATGATTTTGATGATGATTCAGTG
AGGAAAACAATGGGTTTGAGCCAACAAGAATTTGTTACCAAAATAAATATGTTGAATGAT
GAAATTAAGAAGGCATGGGAGTCTGAGCAAAGAGTTAAAGCTTTTAAAATAGGGATCCAA
TGTTCCAAGCTACTGTCAGATGTTAATGTCATGCACTTTTATCCGAGCAAGTTCATTCTC
ATCACCGATATCCTGGACACATTCGGTAACTTAGTCTTCGATAGGCTCTGTGAAAAAAGT
TTTGGGCAAAAGCTTGTGAAGCCTGTTCAGGATATCAACCCGAAGGAAGTGCCGGAAACG
GCGAGAGAAACCTGTCAGAACTGGTTGTATAAGATGGCATCGATTAGAGAGCTTCTGCCG
CGCCTTTACATGGAGATGGCTCTGTTGAAATGCTACTCGTTTACATCGAAAGAGGAAATA
AAACCGACAATCGTGAGACTGACTGCGATGATCAGAGGGATAGGAAATCCCTTAGTTGCG
ATCTATTTAAGGGCATACCTCTGTAAGGTGGCGTCTAAATTATTAGGAAACGAGTGCTCT
GATTATTTTTATGAAAATTTGAAGGAATTTATTGAGGAGTATCAACAGGTTTATCATGTG
GCCATGAAAAAGAAATACGAAGGACAATTACTTACCTTAGATAAATATTTAAACATTTAC
ATGCCGGCCGTTGATTGGCTGTTTTTTGGAACTTTGCATTCTACCAACTGCAAGGAAACA
CTTTTGGATCAAATGCTTCAACAATGTCAGAAAATGCAAAACAATGAATTGCTCCTGTGT
GGTATTCTGTCTGCATTTGATTCGAAAATTATAATTAAAAGGTCTACAAAAATACTAGAT
ATGATTGTGGAATCTGCCGATAAAATGGTACTGGTCCATGACGTGTTGACTTCGCTCGGC
GAACATTTATGTGCGTCGGAAAACTGCCGACAAGTCAATTCAGAGACACTGATTCAAACT
TGGTGGAAGATAGCCAGCAACATAAGGTCTACTGTGCACTTTTTGCAAGTTTTGGGACCG
TGGCTACAATTCGCTTGTACAAATTTATCGACCCAGCATGTGAATATAATTCTGCGTGGA
ACAATACGTTACCTGATCAAGTGCGGGAAATCGGCTGACGAATTTTCCGGCAACTTACAG
ATTGTCATCAAAAGGATGCTCGGATCAGTTCCGGACATCGAGGAATGTTTTCTGATGGAT
GCGTTTATGCCGCTCATAGAATTGGTACAGACGACGAACGCACGTACCTTAATGGCGAAA
ACGGTGTTGTCAACGTTCTTTACGCGGTATAACTCTCTTCACATCGACGACCATATTGTT
ATAACCTCACTGATGTGCCTCTGCTGCACCCTCCACGATTCCATAAATGCTATAACGGTA
GATGATGAAATAAAAGTGTGCAGCGAACTCATAAACAAGTTCGTCCACGCGGGCACGTTC
CACGACGACTTCGAGCAGCAGTTGAACTTCTACGTGGAATGTAGATCCTCCTTCATTAAA
CTCGACGCTGTACTCGTTGCTCTAGTGCAGAAGGTAAATGGTTTAGCGATACGTGCCGGC
GACGCACGGAACAAATGGCTGCAGAGGGCGTGTGCGGCTTATTGCTACATCACGGTCCCT
TCTCTGCACTGCACCATCACTAAGGCACAGCTGTACCTGCTCTCTGGACAAGTCGCCTTG
CTCAACAACTGCATTGGACAAGCGGAAGCAAATTTTAAATCCCTCATAGGCTTGATACCA
GATATTCCGGAGTACATTCTAGAAGACGGACAAAAAAAATCAACCAATGTCAAAGTTGAA
GGAATATTGCGCGATTTCTTATCCACACTTCTTGTTTTGCCGGACAACGTGGACAGTAAC
TGCAAAGCGTACATACTGAGCGGACTGATCAAGACAATGGAGAGGGTGCACTGGCGTAAA
ACGGACCCGCGCTACTACAACACGCTTTTGAACATTCTAGATCTGCTCAGCGAAATGGCG
CAGGAGGATTACGCACATCACATCGATTCCGTTCTATCAAACGACAAGCTGTATGGTTGC
GACGAGGAATTCGTTTCGGTCTTAGACGGGTATGCGACGGACATATGCCAGGAGTTGCTC
GTGGTACTGAAAGCGCTCGGCGACAACAAAGAGACAAAGAAACAGTACAATTTGACGTTG
GAATTATTCTGGCGCGTGATAAGACGCGCCGATTTAGAACAACATTCCATGCTCACTTTA
GCGGCCAACTTGTGGATGCTTTCAAAGAAAATACAAGATCCCAATAATAAACTCGCAAAA
AGCATTCTTTCCGCGCTACGCACCTCTGAAGATCTCGCAAGTCGACAGCTGCTCGAGAAG
TTAGAACAAGGTGTTCAAACCTGAAACAGATTATCCTAATGACTACATGAAGATATGATA
TACATCTAAACATTCCTACAATCTGTTTACTATTCAAAATACACGAAATCTGATTAGACT
ATTGTTATTATAAGTTTGATTAAATTTCAACATTTTATTTCCGAAGAATTTGTACCTTAT
ATGAAAATCATAAATAATAAAATAAAAAATAATGAGATATATATACATAGACATGTCTCA
TTAATGTAAACAACATGTTAATAAAGAATTTTTCTGATCAAAACATAATTTAAATAACAA
AACATAATTTCTACATAAAACAGTTTTGTTGCAATAGTTATTTATAATATATTGTGTTTG
TTTTAAACTGCCTTTAGAATAAGAGTCATGCCG
(2853 bp)

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