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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13449_c0_seq2
Scaffold_idBomo_Chr11
NCBI non-redundant
(nr)		PREDICTED:_collagen_alpha-1(XVIII)_chain-like_[Bombyx_mori]
Ontology
GO:0001525 P angiogenesis
GO:0005198 F structural molecule activity
GO:0005201 F extracellular matrix structural constituent
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005581 C collagen trimer
GO:0005582 C collagen type XV trimer
GO:0005604 C basement membrane
GO:0005615 C extracellular space
GO:0005788 C endoplasmic reticulum lumen
GO:0007155 P cell adhesion
GO:0007165 P signal transduction
GO:0007275 P multicellular organism development
GO:0016021 C integral component of membrane
GO:0030154 P cell differentiation
GO:0030574 P collagen catabolic process
GO:0031012 C extracellular matrix
GO:0070062 C extracellular exosome
Transcript
Level		FPKM:5.45 TPM:5.48
ORF EntryO_BomoSK14080_complete:A_BomoSK_comp13449_c0_seq2
Sequence
(Nucleotide)
AGAATCTACCACCGGATCGGAAAACCGACCCACTGAGAAGATCTGGCGAAAAACTCAGTG
GGCCGTGTCTATGGGTTAATTTATTCGTCGAGCCCGTCGTTGAAAGCGACGGCTTCGGCG
AGGACGGTGATCAGTGCTTGAAGTATTTAAAAGCACCGTTAACGGATCAGGAAGATCCGT
AATGAAGTGTTTAGAGTAATTACACAAGATACACAAATACCTATATTAAAACACATTCAC
GACGCTTGAGCTCATCTTAGTATTGAAGGAATCGATCCTAGACCCATTATTTCTTTGCGT
CAAGTCAAACACGAATTAAATGAGCCATGAATAAAAGCCATTAAATTTATTAGAGATCGA
CTTTTTTAAGGTGGCATTTGGATAAATCTATCTACGTGGCGACAATAGATAGTACAGAAG
GAATACTAGAAATGTCCACTGCTTATGCAACGGGGAATGAAGAAATGGCTAGTAAATTTG
ATTCTGCGTTAATGAAAATTATAGTTAGATTCAGTCAAACATCGCTTTAGGTCATTCTAG
CTAAGAGAAGATCAACAATCGATTCCAAGGCTTTGAAGTTTTTGATAGCAACGAGTGATT
CGAAAAACCGTGAAAAACACTGTCAAAATATTCACCAAACCAACAGGTTGATACAATTAG
TTTGTTTTCATAGCGGTTTTTACCAAACGCGTATGAATAGGCATGAATAAAATCAATACA
ATCAAATTTAAAAACTTTGTATTGAAAACGAATTTTAATGTACCTACCAAAAATTTTAAA
TTGTCTACTAGCTTTGGGACTGCTATCTGCTTAGTTAGACCCTGATTACGGAACAAATTT
TTGTGTTAATGACCAGAATCCATAATATGTTTGGGATTCCATAATTGACAAACTACAACT
CTAAAATTCACATTTTTTTTTCTTTCTAATTCTTTTAATATTTTACAGGATTTCAAATTA
CCGAGTATAGTTAGTATGATTGCATTATTAAAAGCACATTATGCTTCAGCAACACCTCTC
TGTGTCATTGTTCTAACATTTGGTCATGCAAATTACAATTTTATTTTTAATCTACAACAA
AAAGTATTAAAAAAATGGTCTTTGGTCATAATTATCATGTGATTTATAACGCTTTTGTTT
CTCAACCCCAGAAGTAAATTCGTCATAATCTCAATAATATTAACTCGTATCAAATACACA
ATTCTGACTCTCTCAAAAATAGTTTTTGGAAACAACGTTTAATAATTTACTATTTGGATA
CTGTGTTTTATCTTCTATTCCATAAAATACCAGTGTATCGTCTTGTTCGTCAACTAATTG
ATTTTATAAATGAAATCAGTTTTAGACATTTAGATAAAACAAAAACAAAGTTAAATCCCG
AATTATCTAAACAACAATAATTAAAGTAAAATAATGTAACTTTCTAATATTATAATGGAA
GTTATTGTTTTCCTTGGAACTGAATGAGTTATTCTCGTATAAAATGGCAGCTAAGGTATT
TAAAGATTAAATAAAGTTTGCTTTAACATCCCAAGTCCATTGTGTACAAAGACTATTTTT
GTCATGCAACATATTACTTAAACAGTATTCACACAGTGAATTGTTTAGTGATAATTGAAA
GAGATACATGTGCTAAGCTTGTAAAATTGTGATACTCACTTATGTTTTTTAAAAGGCAAT
TTTTAGTGGATTATGAAATATCGTGAACTGTATTGACACTGTAATAGGAAGGAACAATTT
CACCTTCCAAATATGCAAAAAAGACAATTTAAAATTATTTACGTTCAACGGATGGGAAAT
ATTTAACAAAAATTTCGAATAAATTTTTGATTGACGCATGGAATATTCTTTTTATTTTAC
TGACGAAAGAATACCAGTCTCGCTGCGTTGTATATCGGCAAAATTAATGAAAAAGAATGG
GCCGTTTATTAATATTTCGTGTGCCACCATGGAGCGCTGTTTAGTAAGTCGTTCCTGAAG
TGCTGATTTTAGATGAGAAGATGCTACAATATACTCCGATTCCAAACTAGCATTTACTGA
CGGTAGAGCATATTGTAATCCCACAAACAATAACCAAAATACTCCGATTACAAACCAGCA
TTTACTGACGGTAGCACATATTGTAATCCCGCACGGATAGGTCCCAACATCTTGTCTATT
TTTGCCACAAAACAGTCATACATACCATAGCCCATCTGGTTGTAAATACCGACTTTCAAA
CATCAGTGTGGGGTTCCGAGATGTTTTGCCGGTACTTATGCAATGTAAATATTAAACAGC
TTTCAATTGACCTTTCCAAAACTGCGCTTTACTTACGACATACCAAGCTTTTTACTTTGT
TAACACGGGTCCATAATCTGAAAGCATACCTAAAAATATTCAACATCACATTATAATATG
AATAATATATAAATAGATTTAGAAATAGAATCTATTTGTATATTTTCAATATTATAATCT
ACAAGTCGTATTGAATTTGACAATTGTCTACTTCTTTCTTTACAAACTATTATTAATATT
TGTAAGTTTTTCAAATTATTCAGTGCTATTCTAGAAGTTTGTCTTCGACCCTTCCAAAGA
AGTATGACAACTGAGCAAATGTCAATTAATTTTAACTCGAACATCATTAACTCGAATAAC
ACGAGTAACTAAATCTGTTTGAAATCTGTATAAATAAAACGTTCAAAGACATAAAATTCT
ATAAAATGTTTTTTTATAAATTTAATAACAACTTTCACGTAATTTCCGCTGCCATGCAAA
TATGTGACTTCAGCTGATTCTAAGTTACTTAGCAAGCAAAAGGAGAGTCATGTAGTATAA
CTTTTCAACATAGATATTCTTAACAAAGATAACTAGTCTAACGATTATAACCCGAACATA
CAGATTTCCAACAGTTTCGATTTTATCTTAACAGATTTATTTTATTAAAAAAAATATTTT
TGTAGTTTAATGAAGAAAACGAAGAGTCAACGGACAATGTAGAAGAACCTCAATATATTA
AAAACCCGGAGAAAGGTGAGAAAGGTGACAAAGGTGAGAAGGGTGAAAAAGGACAAAAAG
GACACCAATGTCTCAAAGGAGAGCCTGGAAATTCCGTCATCGGTCCAGAAGGATCACAAG
GACCTGTTGGGCCGCTAGGACCCCCTGGCCCCGTAGGAAAGCGAGGACCGAAAGGGGAGT
GTGAGTGCTCGCCTAATTTGGTATCGACTCTTTTGGAAACAATGCCTGAAATGAGAGGAC
CTCCCGGTGAAGCTGGTCCCAGGGGCGAGCCTGGACTTCCTGGTCTTCATGGGGAGAAAG
GCCCTGAAGGTCCTGCGGGGAAACCTGGCCTAGACGGTAGAGTAGGGGAGCCAGGTCACG
ATGGTGTACCTGGACGAAACGGAAAGCCTGGGGAGCCAGGACCACCAGGAAAAGACGGAG
CACCCGGTCGTGATGGAGAACCTGGACTAAGAGGCCCACCTGGCCCACCCGGTCCTGGTT
TCATGGAAACAGAGGAAGAAAAGAAGGCTCGACAGATTCGGATACCTGGGCCTAAAGGTG
AGCAAGGCTCACCTGGCTTACCAGGGTATCCCGGGCCAAAAGGTGAAACCGGATCAAAAG
GTGACAAAGGAGAAATTGGACAACAAGGTGCAAAAGGAGAAGAAGGTATCATGGGTCAAA
TGGGTGAGAAAGGAAAAAAGGGTGATAAAGGTGACGCAGGAGTAGATGGTAGACCTGGTA
TGCATGGAAACCACGGAGTAGACGGGAGAACAGGTGATAAAGGTGATAAAGGAGCACCAG
GGCTGGCGGGACTTCCAGCAAGCTTGGCTTCAATTTTGGACGAAGAAATGGACGAATTGA
CAAAAGCGGCAATCATTGAGAAATTCAGAGGGTTCAAAGGGGAACACGGCGACAAGGGTG
ATAAGGGCAGCAAAGGTGATCAAGGGAATACTGGTCTAGCAGGGGAACCCGGTAAAGATG
GTAGAACTGGAAGCACGGGGCCTCGAGGACCTACAGGTCCCCGAGGAAAACAAGGTCCTA
TGGGCCCTAGAGGATACAAAGGCGCAAGAGGTGCACCAGGACCAGTTGGAAAAGTACCAG
CTTCAGAAATAGCTTTACTAAAGGGTGCTACAGGACCTCCAGGACCAAAAGGAAGTACTG
GAGAAAAAGGTCAAAAAGGCGATAAAGCCCCGGAAATAGACGTATCAAAGCTGAAAGGTG
AAAAGGGGGATCGAGGGCTAGAAGGTAGTCCCGGTAAGCCTGGCCCCATAGGACCAGTTG
GCCCTCCAGGAATTTGTGAGAAGTCGAGTCCTCAACCACCCATCCCTGGACCTCCTGGAC
CCCCAGGGCCTCCAGGATCACCTGGGAGAGACGGTGAAGCGGGTCAACCAGGAGCGTCCA
TAATCGGTCCGAAAGGTGAACCAGGATTTACGATGACATCGAATAATATTGATGAAACAG
TTGATTTCGATAGCAACGACGATGAAGCCTTCTTTAAATCATACACGATTATTTTCAAGA
CCTACAAGGGTCTGTTGAAGAGAACATCGAAAACGCCTGTAGGAACTCTCGCTTACGTTC
TGGATGAACAAATTTTGTTGTTGAGAGTGGAATATGGATGGCAGAATGTTAATATTGGAT
CGATGTACCAACCTTCGAGAAGCGCACCTAGACTTGTACCATACAATCAACCGTCAAAGT
CACCTAACGACAAAAGATATATACGCTTGGCAGCCCTGAACGAACCTTACTCTGGTAGAA
TGGAGACCCACTTAAATAGGGTTGGCTACAGCGCGATCAACTACGAGTGCCACAGACAGT
CCATGCGCGACTATAACGGAACATTCGTTGCTGTGCTCTCAAACAGGGTAACAGACCTAA
TTTCATTAGTAAAACCGTCAGAACGTAACATTCCTGTTACAAATTTAAAGGGGGAAATTC
TTTACCCTTCGTGGAGTAGCATATTTGATGGAGCCAGATCAATGCACGGGCAATCTAAGG
CTAATATCTACAGTTTCGACAACAGAAACGTCTATGTGGATCAACAATGGCCTAAGAAAA
TGGTGTGGATAGGTGCTGATACTCTAGGCAATCGATCAACAAAAGCATACTGTGACGAGT
GGAGCTCAGATAGCCAACAAATGTTTGGCACCGCATCTCCTCTAGACAAACTTTTAGAAC
AAAGACTATTGAGCTGTGATAATAAACTTATAGTCCTTTGCGTCGAGTTATCGTCGCAAG
CATCGAGACACAATCATAAGAAGCGCTGGCCCAAGAAACGTGTTACGTACGATAAACGAA
TCCGAAAACCGTTTGCTGGTACATAGTAAAAAGTTTTTAGTGTACAGACTTCAACTTCTT
GAGTAATACTCGTAATGTAACATGTGAGATTGATGTGCGCCATAGTATAATATAACTTGA
AATATGTGTGGTGTTGAAAATTTTGTGTATATGAAAGTTCAACATTTATTTCTGTGAATT
GTTTGTGTCATCTTATCACGTAACGCGGGACTGTCGTATCCGCCTTTCCTGTATTTGAAA
CAAAATGGACGGCTGTCAATCTGACAGATGGATGTGTCAAACGAATGTCATTGTGTCAGT
GTGATAATGAGCATCCATTACAGTTATTACCTAATTATAATACGGGTTTTATCAATTGAT
TTAGCACCTTTAGAATTGAAGCTAAACGACCGACCGACCTAAAAACATAGATTCTATCAT
CTTATAAAAAATATTCAATCTGTTTTAGTCTAGAAAAGGACAAATGTACTCTTTCCGTCT
CTTTTAAATCAAGCGCTTACTCTATAGTAACGTAATCGAAAAACTAAAAAGTGACAATTC
TTCGATTACATTTTTGGCGTTTATAAAAAAATAAGAACTTTAAATTAAGCCATTTCAATT
CTAAAGGTGCGAATTATGTATTAAAGTTAAATAAATCTATGTCTGTATTATACACTGCAT
TTCTAGTAAATTTTCAATTGTACTCTTTTTGGATAATAACGAATAATGTATTTTTAAATT
ATTATAATTAAGAACAGTTAGTTACGATTCTTATCTTTTAAATAAATTAAGTTTTTATTG
TACCTATTCAAATTTCCACACTTTTGGTATTATATAAATTATTATTTTATTATTAAAATT
AATTAGGTTATAGTATGGCATATATTATAGTATGGTATCGTAAATTGTTTTTAGTTTTCG
TAAGTTTATATTTCAATTTCAATTATGTCCTATCAAATTAGTAAAGTGAATCAACAGTTT
TGACAGACCTATACAAAAATAAACATGATTTTGATTATTATAGAGGAGGATAATAGTGTT
ATTGTAAGATATTTCAAAAATATGTTCCAAGCTTTTGTTTGTATTTCTGGCGACTCACGG
TAAAAGCGAGTACTTTCACGGGACGATCACACTATCAAACTGAAATAAAGCGGGAAACTT
AGCCTAATTTTATACATTTCATTGACGTGTATAAAATTAGGCTAAGTGGCTTATCTTGTA
TTAAGTGATTACCAGAGAACACGTGATAAATGGCCGTATCCACGTTTAGATATGATGCCC
CATTACTGAATGACTTGATGGTGCGGTAGTTAGCGACTCTGACTGTCACACCGAGGGTCG
TGGGATCGATTCCCACATCGAGCAAACATTTTGCGATAAACAGATTTATTTATGGATATG
TTTAAGCATATCTAAGTATGTTTAGCAGTCTCTCGTAGGCATAACCCAGGGAATCCTAAA
TTGGAGCAGGATGACCGGAGCGTGATTTGTTCCCAGTTATTATTATTATTATTAATTACT
TAAATAACCTATGTGCCTATTATTCTTTTTATTTATTGCAT
(6821 bp)

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