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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13409_c0_seq1
Scaffold_idBomo_Chr10
NCBI non-redundant
(nr)		PREDICTED:_pre-rRNA_processing_protein_FTSJ3_[Papilio_polytes]
Ontology
GO:0000453 P enzyme-directed rRNA 2'-O-methylation
GO:0000463 P maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000466 P maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0001510 P RNA methylation
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0008168 F methyltransferase activity
GO:0008649 F rRNA methyltransferase activity
GO:0008650 F rRNA (uridine-2'-O-)-methyltransferase activity
GO:0016435 F rRNA (guanine) methyltransferase activity
GO:0016740 F transferase activity
GO:0030687 C preribosome, large subunit precursor
GO:0030688 C preribosome, small subunit precursor
GO:0031167 P rRNA methylation
GO:0032259 P methylation
GO:0042254 P ribosome biogenesis
Transcript
Level		FPKM:8.65 TPM:8.70
ORF EntryO_BomoSK13952_complete:A_BomoSK_comp13409_c0_seq1
Sequence
(Nucleotide)
CTCACTTTGCTTTTCCTTTCTTTTTGGGGACTTTTTTAGGCTTGTTTTGTTTCTTGGGTT
GTTTTTTACCTCGACCTTTTGTTTTCTCCTTTGCCTTTTGGGCACGTAAGTCCTTTTTCA
TGCGCGGATCTACCACTTTGTACTGGCCCTTAACGCCCTGTGGTCTCTTCATACGCTTAG
CAGTTGTATGTTTCTTGGCCACCACATAAGTGATTTTCTTTTTACCATCAGATTGTGCCT
TCTTGTAAAGTTGTCTCACTTGTTGTGCTTTCTCTCGCTCGGACATATCAGCGTTCTCCA
TTACCGCCTCGACTTTTTTCTTTGCACGTTCCATCTTTTTGATCAAGCGCTTCTTCTTCC
GCGCTTTGGCTTCAATCACCTTCTTGATAGGCCTCACATTGATGTCTTGTAATCTATTCT
TGTATTCATCAGTATACTTCTCCGGTATCACAATGTCTTTCTTCATATGTTTCTTTTCAT
CTTCCATAAACCAATCTGGTAAGTTTTTATCGTTAAACGCGTATCTATTCCACGCGTCAT
CAATTAAATCCCTCTTGAATTTTTTTGATGTAGCTATCATGGTTCCTAAAGCAAGTGTCT
CTGCGTCCATTTTCAAAGTTTTCTTTAGTTTTTTCAGTTCTGGATCTTGGGAGACAACTT
CAAAACCTTCTTTGCCGGCTTTTGGCCCAGCACTAGAAGCACTGGGAGTAACGTTTTCTT
CAACATCATAATCACTGTCAGAGGAATCATCATCTGAACTCTCGTTGTCTGACAATTTTC
TTTTTAGTGCACTGGTTTGTTTACTTGACTCCACATCTTCAATGACTTTCTTCCCTTTTT
CCTTGAATGTTTCTGTTAACTTGTCCAAATCTATACCTTCATCAGCTTCTTCATCAATAT
TTTTAAAAGAATCTTTCTCGAACCATAGCTGAGCTTTCATAGTCCTTTTCGAAACTGGGT
CAGTGTTGTCCAGATCAGTGAGCAACGGGTTATTCTTTGGAATAGACTGTAATCTATTCA
ATTTGTTTGCTGGACTCACTTTACTGTTTTTTAGAGTATTCAATTTAGTTAATTTTTTGA
TCTTTTTCGATTCAGTGTCTGAGTCTGAGAAGGCTAATGACTCTTTTTCCTGTTCAGATT
CTGAATCAGATTCCATTTCAATTTCACTGTCTGAATCTTTGTAATAAAGTCCTGATGAAT
CGAGCTTGGTTTCCTCAACATCGTATTTCAAGTACTTTGGCTTAAGTTGAATCTCATCAT
CAAAAGCATCATCTCCATCAACCACGGTGTCAGGCTGCTGATCTATAAGCGTGTTCAGTT
CCTCTGCATTCTTGATATCAGAGAGTTGAAACATATCATTACTTTCCAAAATAGGACCAT
CATCTCCTTTCAATACCATCTTAAGATTCATTTTTTCAGCTAGTTTTTGTCTCTGTTTAT
TCAACTGCTTCCTTTTACGTTTCAATTGTCGCTTCTCTTCATCCTGCAGTTCTGCAATTT
GTGTGTCCACATCACCTTCTTCAGTATCAGCATCCTCATTTGTTTCATGTTCTTCGTTTT
CATCATTGGTTTGGGGCTCATCATCTTTTTTCTCCTTAGACGATTTATATTCTTTCATTT
GCTTGAACCATGACAGCAGTGATTTTAAGTCTTTTCGTCCAAGCACCTTAATATCCTTAC
AACATTCCTTTATTTCTGGTGTTGTCTTTGGATGAGTTTCTATTTCCTTATCATCGAAAA
CAATCTCAGAGCAACCATGAAGTAGATCTACTGGATCATCTTTTCCCAAAAAATCAGACA
GTTTTACTTTATGATGTGTGGTATAATCATTTTCTTTATATCCTTCTGCTTTTGCTTTTT
TTTGTTTCTCAGGATGTAATATATTTATATGCTGTTTTTTAACTATATCAAGATCTTCAA
AGACATGTTTGGGGTCGAGAAATTTAGGATCAATTGTATCTGGTGCAATATAGCCCTGAC
ATACAACGAAAATTTCAGAAGACTCATTACGAGAAGCTTGGGGCTTTGTAGCATGTACTT
TTTTGAAGAATTGTTTCAGAACCCATAAAAGTGCATGATAGTCTTTCGATCTGAATACTT
TAGTCACAAACCAACCACCTTCTCTGAGGAAGTTCGTTGCAAGTTTTAAAGCACTCAACG
TTAGACAAGCTTGTTGATAGGCATCATGGATCCAATTAAGACCGACATTGGGTGCACCGT
CATTAAGTACCACATCAGCTTTCCATGTTTTTATTTCTTTTTTGATTGCTGCCTTACATT
TTTCTGTAGTGATATCTTCAGTCAGACCTATACAACCTGGAACTGGTTTTATTGGAAACA
AATCGACTCCTATTACTATGCTCGAGACTGGCATATTTTGGTGGGCCACCTGCATCCACC
CACCAGGTGCAGCACATAAATCGATACATACTCGTGATTTCTGCAAAAATCCAAATTTCC
TGTTCAATTGTATTAATTTGAATGCAGCTCTTGATCTATATCCTGTTTCTTTAGCTAGTT
GGTAGTATTTATCTTTCCGTTGTTTTCCTACTTTTGTTTTCTTTCCCATTGTAGTATGTT
ACTTTTTTAAGCATATGACTTCTGGGGTTATTTCTAAAAACAATTGATTATAATCAATTA
CATGACAAAATTGAATGCAATATGCACATTACGAG
(2675 bp)

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