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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13405_c0_seq4
Scaffold_idBomo_Chr13
NCBI non-redundant
(nr)		troponin_I_transcript_variant_A_[Bombyx_mandarina]
Ontology
GO:0000280 P nuclear division
GO:0003779 F actin binding
GO:0005523 F tropomyosin binding
GO:0005634 C nucleus
GO:0005861 C troponin complex
GO:0007399 P nervous system development
GO:0007507 P heart development
GO:0007517 P muscle organ development
GO:0007519 P skeletal muscle tissue development
GO:0007629 P flight behavior
GO:0030239 P myofibril assembly
GO:0045214 P sarcomere organization
GO:0046716 P muscle cell cellular homeostasis
GO:0046872 F metal ion binding
GO:0048738 P cardiac muscle tissue development
GO:0060047 P heart contraction
Transcript
Level		FPKM:18.18 TPM:18.29
ORF EntryO_BomoSK13938_complete:A_BomoSK_comp13405_c0_seq4
Sequence
(Nucleotide)
TTGGGAGTTCAGGTCGGAGATCTGACAAAATATAATAATTAGTGAGAACTAGGCCGAGAT
ATGCGATAGCACAAAGGAATTTTTAAGTTAGAAGATGGTGAAAATTAATATAAATTGAGT
AAATTTAATGTAAGTAACTTTAGTCTTAATAGAGAGAAGATTATACAAAAATTAAAGAAA
TATAATATTAATATAGAATTGTCTTCAAACTTAACGTTAATAGTATAGTAATCATACTAA
AATGCATTTCAAAAGTTTATGCGTTCACCAAAAAACACGTATATGAGCCAGATAAATTTT
GCTTAAACTTGTGCAATACATTGTTTCGGGATAATGAAAACACATGCAATGCACTTTAAG
CGAAACCCCACATAAAAAGCTAACTCGAAAATAAAAGACAACAATTAAAAAGCGAATAGA
TATATCTGCTTCAAGTATTTATTATTAAGTCGGTAAGCAGATCCAGATATAGAGCTGAGC
TGATATTAGGCGTGTTATTTGCAGCTGTATTTGATATTTGTAGTTTGTGAGTAAATTTGG
ATAAAATAAAAACAAAAGATCTGTCCCCATCCTATGATACTGTGGTCCCGTTCTACTAGC
CCGTGCTCTTTGCCTAAATACTAACTAGTTCAACGCTATTGCTTACTCCGTTTCGTGCAC
AACACCTACTTAACGTGCCTTCGACTGGTAGCTGGCCGTCAGCAGCTCCTGTGTCTCCAA
CATTACAATATAAATATTCACAAAAAAATAATTATACATAAAATGTGCAGGATTTTTTAC
ATGTGCAACAACATAGTAGCGCATACAATTCATATTTGTCGACGTACACAAAGATGACGG
TCGTATCGATAGTCGAACTGATTATATTGTTGCGAGCGTTGAGTAGTTCTGCTCTGGTAT
TTTCGCATGTTGGACGCAGTACATTGCGGTGTGTATAATACATGGAGTGGCGGTGCAAAA
TCGATCGAAATTTGCAAATGTAAATCGGTCGGCAGTATGTAGCAGATAGACGTGTAGTGT
TTGGACTCGCAAGTGAGCATAGTTTGCAGCCGAAGGTCCGGATGAGTAATGTGTAAAGAG
CGACCACAGCGTGGCGCCCACGGCGGGCACTTCAGGGTAGGAACGGGTACAACGACCAGA
GCATGGCACTTTCTAAAAACACACGGTGTCCATACGGGTTTCTCAAAAGGTTTAAACAGG
GTATCTCAGCAACCGAACACGCAAACAAATCGCGCGGTATAATCACGGCACATACATGAA
AAGTTGGAGATTTGGAACAAGAAGTTTCATTTGCACTATGCACTTGCGTGTGCCAATGGG
GGAACCAGTCCAGTGTTCCGGTCATAATTTGACTTCAACCATTGTTGTTAACGTAAAAAG
AGAAAATTCAGTAAGGCCATTAAGATCGACACCACACACGAAGCGTCACTGTTGTACGAG
CAGCGATGATTCTCGACTATTCAATTTACCACAGTTTAAAAATATTAAAGTGCCATACTA
TGCAATGATTAGTGGGAAGCGGAAAGCGAAAATTATAACTATACATGAACATGCAACAGA
CAAGAAGCGTTTACAGTACAGACAATAGAGATGAAGCGATCCACGTTTTTATATTTGAAG
TTGGACACTGAATAGTTTCCAAGGCCGTCGGTATGATGGATACGATACGAACGGAAGTAA
TGGAAGGTCTGACGGGAGCATGCTGTCCGCGCTGGTGAGTGCAGTGTGGTTGACTTGTTA
CGGTTACAGTAGTTAGTGTAGTTAATGATGTGAGCTCCATGTCGGTGACGCGAACCGGCG
AGATCGATTTTGCACCGCGCGGCTGCTCGACGCGAGCGCCCGCTGCCCGAACTACGCACC
CACACACGGATACTACAGTACAACACTAACGAACCGATAATCGACCGTTATTTACATTTC
AACAACAAACATACCGAAAACTTACAAAGCGTTATCAATGTATCAACACGAATCGTCACA
CGCGCACGTTTGTTACATTATCGATGATTGTGGTATTCACAATGGTCATAAAGTATTTGG
TCAATACCTCATAATCTCTTTTCCTGACTTCATGTTCCAAATCCCACTTCTGGCCCTCAC
ACACATACATGCGGTCATAATACTCCTGTATTATTCTCTTGAGCATTGCTATAGAAAAAG
GAAAGACATATTATTGAGCCGGCGTAATGAGCATGGGCATATCGATGCGAGTGACCTGCG
TCTGTCGTCGGAGCGACGTGTGCATGTGTGCGGTGAGCCGTACAACTATCATGTCATGTC
GTAAACAACTAAATCAGATTCAAATCATAATGCATTCCCATTCCTATTATGCGGTTTACC
TCCATTTTCCTAATTTCGATCGCTCGTTCTAGTTCATATTTATCCCCCTCAAGGTTGTAT
ATTCTGTGCCAGTACATTTGACATATCGTCTGCAGTTCCGCTAAAGAAAAACACAATCAC
AATATAATGTATGAGAAGATGATCGAAGGCTCGTAGGCGCGACTACGGCTTGGTTGTCTC
CCGGATCTGTGTGTGTAGTAGTGTTGTACGCGAGGGACTCTTGATTTGTGGATCAAAGCG
AAGCGAAGCTATATGATCATTATTCGGGTGGGACATTGCTGTAACGTAGTTTGAGTATGT
TGTTATTGACTTGACCACTCGATGACAATATCTACAAGTAGTATCTATAGCTGCTCCGAG
GTCGCCGCAACGGGTCCTTGTTATTTTAGCAGTTACCTAACTTGTTATCCACACGGTTAG
GGCTGTACGTGTAATATTTATATAGCTCCGTTTTAAATTATATAATTTCGCTGCAAAATC
AAAACAAAATTTTTAACTAGTCACATTATCGGCTAAAACTACTCAAACGTGAGCGTAATA
ATGTTTGCGTAGAGCTCAAACCAAGTCAGACCTCGAGCCCTTTGCGCGCCACTTCCATCT
CGCGATCGTACTTCTCCTCTTCTAGCTTGGTGATACGCTGATGGTAGCCCGTAATGATGC
TCGTCAGAGCGGCTACAAATTCAAGTGACGATTACTCGCGCGAACCAAAAACCGGAGAGT
TATATCCGAGCTCCCTAACCGGCGCCGCAGCGGAACACCCACGCATCATGGACGGACAGA
AAGCGAGGTGTCAGTCTCGGAAGTGAATTTTAGGATATTAGAAAAAAAATAGAAGGTAGT
AAGTAGTTCGCATTAAGGTTTAACGACGTCACATGGAGCTTAGAAGAAGTAGAAAACGCA
TTAGAAAGACAAATTAAATCAGACAGAGACACAGCGGTCCCTACAACTCGTCACACCAAC
GCTAGAGTTTAATCATTTGTTAACCAGACGAAGTAGAGACAGCACTGCCTTTAGACGTCA
CAAAATAAAATTCGTTAAGTTTGAGAGTGAGTTATAGAGTAGCAAGTTCACGAGAGCAGC
TGTGTCGCGGCTCATCTCACTACCTCCATATCTTTCCTTTTAACGCTGTATTCCAGATCG
AATTTTTCAT
(3490 bp)

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