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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13396_c1_seq3
Scaffold_idBomo_Chr22
NCBI non-redundant
(nr)		PREDICTED:_polypyrimidine_tract-binding_protein_1_isoform_X2_[Amyelois_transitella]
Ontology
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006376 P mRNA splice site selection
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0021510 P spinal cord development
GO:0021549 P cerebellum development
GO:0030426 C growth cone
GO:0033119 P negative regulation of RNA splicing
GO:0036002 F pre-mRNA binding
GO:0043025 C neuronal cell body
GO:0044822 F RNA binding
GO:2000177 P regulation of neural precursor cell proliferation
Transcript
Level		FPKM:4.87 TPM:4.90
ORF EntryO_BomoSK13898_complete:A_BomoSK_comp13396_c1_seq3
Sequence
(Nucleotide)
AATAATAATAATAATTAAAAAAAATGTGTATGCGCACAAAACTACATTTATAAAGAAAAC
GCTATTAAAATATAATAATAATATAGTAAATTGTGCATTTTTAATAAGAGCGAATAAAAT
ATATTTTATAAAATACAATTCAAGAGTTGTAACTGCAAATCATATTGTAAATATTGTAAC
CGATGAATATAATAACAATGTAATGTAATAATAATTAGGGAAATTTCCGTATCCTGAATT
GAAAACAACAAGCGTGGCAATGTCATACATTGCTATCAAAATACGTTCCATTTCACATAA
TATTGCCAAACGAATCTAGCGCAATCTAATTGCAAAATAAAACTGTTATTTTAATTCGTA
TAAATTCAAATTATGTTGATACAATATAGAAATCAACGCACGAATTGTCTATAAGAATAA
AAACGTACGTAAACAAATAATTAGAACGAATATCACACAAAATAGAAATCCTCTCCTGTG
TAACAACGGTTATGGAAGTTAGATACTATTCTGATAAAACAAGCATGATTCGGCTTAATG
TTCATGTGACGATTCATCTTAGATTTAATTATATTGTAACAGTTAAATGTTATTCATATA
AGAAAATAGAATAGCACTTAATCTATAGACTGATCCGAGTAAGCGTAATACATACATATA
TAAAATTTTCAGTCGAGCGAAAATTCTCGATTTTTATGAGAGGTGAGATGTAATTGACAG
TCGCATCGAATTGATATGCGTTACTGGAACACGAGTCTCCGTCGACACAATCTAAAATAA
TTATGACAAACAGTACCGTAAGAATCTTCAATTATAGTTTAGATCCAATAGAACGGACGC
GACTGCCAAGTATTGTGTGATATTCAGTGTGATAGTCCGGTCGAATCCGTTTAGATGCTT
GATTTGGAGAAAGACACCCTGAGGTGATTGGATTCCGAGAGCTGGTAGTTGTGCATCTTG
ATGAGCGCGGTCACTGCGTCGTCGATGGACGACAGTTGGACCAGAGCCATTTTGCGGTCC
TTCGGGAAAAATTTAAAAGCCTTAATTGTGAATCCCCGTTTGGAGAATGCATCTTTGATA
TCCTCTTCAGTCACGGTGGCTGGAATGTTCGACAGATGCAGAGTGGCGCTTGGCGGGTAG
ATGTTCTGGTAATTTTTGCTACCAGGTTTCTTGAATCTGTGGAGTGGGCTCTGCGAGTAG
TCCCTGGTAAGACCAGCGTCAGGTTGTCCTTCTTTAGGGAGCTGAACAGTCTGGTGCTTA
CTTAGCATAACGCGCATCGCCTTGCCGAACACGCGTAACTTGTCCATGTGGGTCAGGGCT
AGATGGGCCTGGTGCGGTTCTGCCATCTGAATCAAAGCCGAATCCTTCTTGTTGTAAAGT
ATCTTCACCCGTTGCACGTCACCATACACGCCGAAAAGGGTAAAGAGAGCGTCAGGCGTG
ACCATCTCTTCGTTCAGGTTAGACACCAGTAGGACTGTGGCTAATGGTAAAGGTGGCGCA
GCAAGGGCTCGCAGAGCGGGCGAGGCCGGTGTGAGAGTGAGAGCTCCGAAGGCTGGGAGC
CCCACTCCACCGACACCCACACCATACGGCGAAGCCAATCCCGAACCCAAGCCCAGGAAC
TGAGGCGCCAATACACCTCCGCTGGTCAACAGCTGATGAGCGTCGCCGTCTCCGGAGGGA
AGCGTCGGATTCGTGTAGTCCCGCGACTTGTCATTGTTGTATTTCACGTTCAGGCAAGTC
ATCTTCGAATAGTCGATGCGGAGTGTGCAGCACCCGTTGTAGATATTCTGCCCGTCGAGC
GCCGTTTTTGCTGTTTGCGCCGACACCGTGTCTGGATACTGAATGAGAGCTTGGAATGAA
TTGTTTTTAGTGAAAGTTACAATCTTGAGCACCTTGCCGTAGCGTTGGAAGATCGAGTAG
AGGACGTCCAGAACGATGGGATATAACATATGCTCTATGATGACACGCAGTACTGTATTG
GGACCGCCCTGTATTTCTGTACCGCCATTAGCTGGTTGCAAAGCGTTACCGCCGCCCGCA
ACAATGGCCGCACCAGCGCTATTCGATATGACTTGTGCCGCCTGTAAAGCCGCTTGCGCC
GATGCTGAGGCATTGCTGTGCGTCTGATCGGTTTTTAGCTCCTTGTGGTTGGAGAACTGA
ACGTAAACCGCTCGGCCACGCAACTGCGCTACACATCCTCCGAAGTATGCGACCATAGCC
ACCGCAGATATCTCCTCTGCCATTTCAAGGAACGCCTGATTTTTGCCTTTGAGCACTAGA
ACGTTGGTGACTCTTCCGAAGGGCAATCCGAGTTGTATGATCTCCGCTTCCGTCGTCTCG
TTCGGTATGTTCCGTATGTGAATGACTCGAGACGGCTTGCCGACATTTTGTTCCAGTTTC
ACCTTCTTGGCAGCAGAGTCCTGATTGTTATTGTCGGCATGGTGCGGAGCGGCGGGCGCC
ATGACGGTGACGCCACTCTGCGAAAGAAGCTCGTCGGAGCCTCTCTTTATTCCAATGTGG
ATCGGGAAGTCTGAAGCTAATGCTGGTTGCGGATGTAACGCCGGCAACAGCGGCAGTGGC
AAAGGACAGGACATCATAGTTGCGCCAACCTTTATAGAGAAATCAGTGCGCGCGCAGGTA
AAACACAGGAATCCCACAGGTGAACGGTACCAGCCGTTTGAAAACTTAAATTAAAAGCTC
GAAAATCGGACGACTGTAACACTCGTGCACTCCTTGTTAGCAGCGCAGCACTACACTTAC
AACAACACTGTCACGGTTTGTTTATCAAATTACGGGCTGCTTATTAATAATTTCAATGAC
CCCAAGTGCGCATGCCCGTCCAACACGCGCCCACTTTGAAAATAGGTTATGTTTAAGTTT
TGAGCACTTCCACTGAAACACCGGTACACGCAGAAGCACAAACTTCCCAGAAGAATCCAG
TTGGAACAACTCGAGAAAACTTTTCAAAAGCCCGCCTTTTCCTCAACTTTTAAACTTTGA
GACAAACAGGTTCCCACGGGTCTCGTTTCCGTTTAATCACTTAGGAAGCACAATTTGACG
ATCAACCGGCTCTCCTAACGTAAATGAAGGCCGTATGCGTTTTTTAAACACTTAAAAACT
CCGAAAACCGGTACGATTTGATTCCACACGTGACACAGTCAAAACGTAAACACAGTAACA
CACGAATTCACTCTGTTTCGATGAAGGATAACATGTTTAAAGTGGCACGAAGTTCGAGTG
ACAAATTAAACGAATAGAAAAAGAAAAGAAACGAAGAATACTAAAGTCGGCGACTGCGAA
GCCGAGCGTCCGACACTCCTGCTGA
(3325 bp)

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