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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13396_c1_seq1
Scaffold_idBomo_Chr22
NCBI non-redundant
(nr)		PREDICTED:_polypyrimidine_tract-binding_protein_2_isoform_X2_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006376 P mRNA splice site selection
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0021510 P spinal cord development
GO:0021549 P cerebellum development
GO:0030426 C growth cone
GO:0033119 P negative regulation of RNA splicing
GO:0036002 F pre-mRNA binding
GO:0043025 C neuronal cell body
GO:0044822 F RNA binding
GO:2000177 P regulation of neural precursor cell proliferation
Transcript
Level		FPKM:4.21 TPM:4.23
ORF EntryO_BomoSK13897_complete:A_BomoSK_comp13396_c1_seq1
Sequence
(Nucleotide)
AATAATAATAATAATTAAAAAAAATGTGTATGCGCACAAAACTACATTTATAAAGAAAAC
GCTATTAAAATATAATAATAATATAGTAAATTGTGCATTTTTAATAAGAGCGAATAAAAT
ATATTTTATAAAATACAATTCAAGAGTTGTAACTGCAAATCATATTGTAAATATTGTAAC
CGATGAATATAATAACAATGTAATGTAATAATAATTAGGGAAATTTCCGTATCCTGAATT
GAAAACAACAAGCGTGGCAATGTCATACATTGCTATCAAAATACGTTCCATTTCACATAA
TATTGCCAAACGAATCTAGCGCAATCTAATTGCAAAATAAAACTGTTATTTTAATTCGTA
TAAATTCAAATTATGTTGATACAATATAGAAATCAACGCACGAATTGTCTATAAGAATAA
AAACGTACGTAAACAAATAATTAGAACGAATATCACACAAAATAGAAATCCTCTCCTGTG
TAACAACGGTTATGGAAGTTAGATACTATTCTGATAAAACAAGCATGATTCGGCTTAATG
TTCATGTGACGATTCATCTTAGATTTAATTATATTGTAACAGTTAAATGTTATTCATATA
AGAAAATAGAATAGCACTTAATCTATAGACTGATCCGAGTAAGCGTAATACATACATATA
TAAAATTTTCAGTCGAGCGAAAATTCTCGATTTTTATGAGAGGTGAGATGTAATTGACAG
TCGCATCGAATTGATATGCGTTACTGGAACACGAGTCTCCGTCGACACAATCTAAAATAA
TTATGACAAACAGTACCGTAAGAATCTTCAATTATAGTTTAGATCCAATAGAACGGACGC
GACTGCCAAGTATTGTGTGATATTCAGTGTGATAGTCCGGTCGAATCCGTTTAGATGCTT
GATTTGGAGAAAGACACCCTGAGGTGATTGGATTCCGAGAGCTGGTAGTTGTGCATCTTG
ATGAGCGCGGTCACTGCGTCGTCGATGGACGACAGTTGGACCAGAGCCATTTTGCGGTCC
TTCGGGAAAAATTTAAAAGCCTTAATTGTGAATCCCCGTTTGGAGAATGCATCTTTGATA
TCCTCTTCAGTCACGGTGGCTGGAATGTTCGACAGATGCAGAGTGGCGCTTGGCGGGTAG
ATGTTCTGGTAATTTTTGCTACCAGGTTTCTTGAATCTGTGGAGTGGGCTCTGCGAGTAG
TCCCTGGTAAGACCAGCGTCAGGTTGTCCTTCTTTAGGGAGCTGAACAGTCTGGTGCTTA
CTTAGCATAACGCGCATCGCCTTGCCGAACACGCGTAACTTGTCCATGTGGGTCAGGGCT
AGATGGGCCTGGTGCGGTTCTGCCATCTGAATCAAAGCCGAATCCTTCTTGTTGTAAAGT
ATCTTCACCCGTTGCACGTCACCATACACGCCGAAAAGGGTAAAGAGAGCGTCAGGCGTG
ACCATCTCTTCGTTCAGGTTAGACACCAGTAGGACTGTGGCTAATGGTAAAGGTGGCGCA
GCAAGGGCTCGCAGAGCGGGCGAGGCCGGTGTGAGAGTGAGAGCTCCGAAGGCTGGGAGC
CCCACTCCACCGACACCCACACCATACGGCGAAGCCAATCCCGAACCCAAGCCCAGGAAC
TGAGGCGCCAATACACCTCCGCTGGTCAACAGCTGATGAGCGTCGCCGTCTCCGGAGGGA
AGCGTCGGATTCGTGTAGTCCCGCGACTTGTCATTGTTGTATTTCACGTTCAGGCAAGTC
ATCTTCGAATAGTCGATGCGGAGTGTGCAGCACCCGTTGTAGATATTCTGCCCGTCGAGC
GCCGTTTTTGCTGTTTGCGCCGACACCGTGTCTGGATACTGAATGAGAGCTTGGAATGAA
TTGTTTTTAGTGAAAGTTACAATCTTGAGCACCTTGCCGTAGCGTTGGAAGATCGAGTAG
AGGACGTCCAGAACGATGGGATATAACATATGCTCTATGATGACACGCAGTACTGTATTG
GGACCGCCCTGTATTTCTGTACCGCCATTAGCTGGTTGCAAAGCGTTACCGCCGCCCGCA
ACAATGGCCGCACCAGCGCTATTCGATATGACTTGTGCCGCCTGTAAAGCCGCTTGCGCC
GATGCTGAGGCATTGCTGTGCGTCTGATCGGTTTTTAGCTCCTTGTGGTTGGAGAACTGA
ACGTAAACCGCTCGGCCACGCAACTGCGCTACACATCCTCCGAAGTATGCGACCATAGCC
ACCGCAGATATCTCCTCTGCCATTTCAAGGAACGCCTGATTTTTGCCTTTGAGCACTAGA
ACGTTGGTGACTCTTCCGAAGGGCAATCCGAGTTGTATGATCTCCGCTTCCGTCGTCTCG
TTCGGTATGTTCCGTATGTGAATGACTCGAGACGGCTTGCCGACATTTTGTTCCAGTTTC
ACCTTCTTGGCAGCAGAGTCCTGATTGTTATTGTCGGCATGGTGCGGAGCGGCGGGCGCC
ATGACGGTGACGCCACTCTGCGAAAGAAGCTCGTCGGAGCCTCTCTTAACCATTTCACGT
AATGCGTCAGTCCGGTCGCCAGTCGGAGACGTCGGGGCTCAACTAAGTTCAACTTTACTT
TAATTTTATATACACTACTTGTTCTACTTAAAGTTTTCTTTTACTGTCTTCAGTTGGAGT
TCAGGATAATAGCGGGTCCTTTATTCCAATGTGGATCGGGAAGTCTGAAGCTAATGCTGG
TTGCGGATGTAACGCCGGCAACAGCGGCAGTGGCAAAGGACAGGACATCATAGTTGCGCC
AACCTTTATAGAGAAATCAGTGCGCGCGCAGGTAAAACACAGGAATCCCACAGGTGAACG
GTACCAGCCGTTTGAAAACTTAAATTAAAAGCTCGAAAATCGGACGACTGTAACACTCGT
GCACTCCTTGTTAGCAGCGCAGCACTACACTTACAACAACACTGTCACGGTTTGTTTATC
AAATTACGGGCTGCTTATTAATAATTTCAATGACCCCAAGTGCGCATGCCCGTCCAACAC
GCGCCCACTTTGAAAATAGGTTATGTTTAAGTTTTGAGCACTTCCACTGAAACACCGGTA
CACGCAGAAGCACAAACTTCCCAGAAGAATCCAGTTGGAACAACTCGAGAAAACTTTTCA
AAAGCCCGCCTTTTCCTCAACTTTTAAACTTTGAGACAAACAGGTTCCCACGGGTCTCGT
TTCCGTTTAATCACTTAGGAAGCACAATTTGACGATCAACCGGCTCTCCTAACGTAAATG
AAGGCCGTATGCGTTTTTTAAACACTTAAAAACTCCGAAAACCGGTACGATTTGATTCCA
CACGTGACACAGTCAAAACGTAAACACAGTAACACACGAATTCACTCTGTTTCGATGAAG
GATAACATGTTTAAAGTGGCACGAAGTTCGAGTGACAAATTAAACGAATAGAAAAAGAAA
AGAAACGAAGAATACTAAAGTCGGCGACTGCGAAGCCGAGCGTCCGACACTCCTGCTGA
(3479 bp)

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