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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13389_c0_seq2
Scaffold_idBomo_Chr21
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC101735428_isoform_X2_[Bombyx_mori]
Ontology
GO:0000976 F transcription cis-regulatory region binding
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0001228 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006986 P response to unfolded protein
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030968 P endoplasmic reticulum unfolded protein response
GO:0035497 F cAMP response element binding
GO:0042803 F protein homodimerization activity
GO:0043565 F sequence-specific DNA binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046982 F protein heterodimerization activity
GO:1990440 P positive regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress
Transcript
Level		FPKM:7.47 TPM:7.52
ORF EntryO_BomoSK13868_complete:A_BomoSK_comp13389_c0_seq2
Sequence
(Nucleotide)
CTTGTTCAGGCACCGGTATCTGCACCTCACGTTTCACAGATCCTCTCACTGTTGTATCAT
CCTCACATTGTTATGTTTGTGTATTTATAAGAACAGTGGTTTTCCCTTAACGGCGTATTA
TTGCGAAGTGAGAAGTGATAATCTGGCTTGAAACAAACACGTCATAAATTAACTCGCGCT
TAGACATTCCGGTTCGCGTAAACAAGATATTGCCAGCTAGGCACCATGCGGTCGCTACCT
TTACCATATGCCGCACAGTAAATAGTTGAAAAAAGCCGACAATACTGTATCAAGATCCCA
GTACTTTTTGATACTACATAAAAACATTTCCAGTTTTTTTTTTCATTGAAAAAATTTAGT
TGTGATTCATAAATGTTGATGTAACATTGAAAAGTGAAGTGTATTCCAATATGGATAAAA
AAGTGGACTTGTTGTCTCTGATAGAGTCAGACACGTGGACGGCGCCAAATGAACTCATGG
AGATCTTCTCCATGGACCAGGACTATTTGGATTTTCTCGAGGAGTCAATTCCAGATTTCA
ACATATGCTCTGAAAATGTATCAGAAACCTCTAAAGCTATAAGTAGCACCTGTTCAGACA
GTGGAATTTCCAGTGATCATGCTGAATTCGATTTTGAACAGCAACTGTCCCCGTTTCTCA
TACAAAACTCGTGCGAGGAGGAACTGCCGGCTCCGATAGCCGACGGACCCACGAGCCCCA
GCACCCAGGATGTCGTCATCCGGGATTCGAATGATACGTCCAATAGCTCCACGGACCTCG
CGGACGACGTCTTCGATATGCAGGACTTCGAGCAGAACGTCGTCCCCGGATTCATTAATG
CGAATACATTCCACAGCCCGGGTAAGAACGGGCGAAAACGTCGCCCTTCAACGTCGTCGC
TAAATGCCGTCCAAACCAAACACCACAAGCCGACGATAAAGTTGCCCGGGACCACGCAAA
AACCGCAGCTAATCGTGACGGCCCAACCGCAGAAACCGGTCAAAGTGGCCAACATACAAG
TACTGAACCCGCAGACTAAAGTCTATTCGAAACCGGTCGAATCAGTCGCGCCCCAGCGGC
GAGTTATCCGGGTGGCCCCGATGGCGGGAAATCCGCGCTCGATATTGTTGCCCGTCACGA
TTAAAGACATGAAAGATTTGAAATCGATAAAGATTATAAACGCGGCAGACTTGAAGAACG
CGTCGAATATAAAGTTGGCGGCGGCGAATTTGTTATCGCAAAGCAAACTCAACGACTTGA
AAGAATCCAGAAATGAATACGAGTACGAACACAACAATAATTGCGATGACTCAGGAAGCG
AACGCAGCGACGACGACGACGACCACAAGGAGACTCAGGTCAGCGACGGTCGCAACGGGT
ACCCGCGCCTCGTGCTAACCGCCGAGGAGCGCCGCCTCTTGGCGAAGGAGGGCATCACGC
TACCCACCAGCTATCCGCTCACGAAACACGAGGAACGGGAGCTGAAGAGGATCAGACGCA
AAATCAGGAACAAGATCTCAGCTCAGGACTCGAGGAAACGCAAGAAGGAATATGTCGATG
GACTCGAAGACAGGGTAAAACAGTGTACCGCAGAGAACCAGACGTTAATTAGGAGGATAA
AAATACTGCAGTCACAGAACCAGTCGCTGAGTGCTCAGTTGAAACGTTTACAGAACGTAT
TAAAGGGTGCGAGTGGTAGCAGTACGAACAAGTCTGCCCAGCCGGCCACGTGTCTGCTAG
TGCTGCTGTTGTCCGTGGCGCTAGTGGCGCTGCCCTCCCTCCGCGACGAGGCCCCGCCCC
GCGCCTCGCCCGCCTCCCCCGCCGCGCCCGCCTCCCCCGCAGTCACGCGGGCTCTACTCT
CCGCCACCAACAAAATGACGTTGGATGAGACGGTGATCGACGATGGAGAGTTCAACATGG
ACGAGCTGATCACCTTCAACCGCCCGCACTCGGACCACGACTACCAGGTCGTCAAGAGCC
TAGACACTCACAAGGTTCTGCCAAACGGCTACGTCGACCTCCCCATAGACGAGGACTGGC
CGCCTAATCTCAAGAAACGTATGAAAAAACTCGAATTCGACTACGAAGACGGCCGGGATT
ACCTAACGCCCGTAGTCAAAGAGGAGAATTACGGCAGTTACAAGATCGAAGCGAAAATCA
AACCGGATCTCACTGAGGATTTCTTGACGAACACACTGCTGTCCACGGGACGGAAATTAG
GAGAATTGTTCGACATTATGCCGCCGATACCCGTCAAAAACGAAGACATCGTCATTGAGG
AGGTATCCGACCACGAGACCAGAAACACGACCGAAGTCAGGAGTTTTGTTGTCAACGGCA
CCGCTAATAACTTTTAAATATACAATTATTTAATTCCTTTAAAAATTCCGTTTACTTTTT
TTTTGTTACCTTTTAATAATAATTTTACTATTAGATTTGTTTCCTGAATATTTGTGTTTT
TTTTATTTGTGAAGACGATGTATGTGACTCATGATTCCATATTTTAAGATCAATTTTTAT
TTTAATAATTTTAGTCTTTTAGATTTTATGTGTTAGTGAGATTGTGAAGAATGATTATTA
CGTAAATTAAGATTATAATTTTATATTAAATTACTATATGCGGAGAGTTTATAATTTATT
TTTAAAAGTCAAAATTAATATATATACAATCAATTTTTATATTTTTTACAGAGAAATTAC
ACTTTCACTGTGCATGTCTATCTATAATTTTAAGCATTTTATTTTGGGTGCAATTACATT
TTAGTTACAGATTTAATTGTTCTAGTAAAAGTATAGTTCTATCTCAATATTAGTTTTAGA
TTATTTTATATTATCTACTTACAGAGCGGACAAGATTCACTGTTGTGTTATCCTATACTG
ATTATTTTGGTTCGAAA
(2897 bp)

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