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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13389_c0_seq1
Scaffold_idBomo_Chr21
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC101735428_isoform_X2_[Bombyx_mori]
Ontology
GO:0000976 F transcription cis-regulatory region binding
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0001228 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006986 P response to unfolded protein
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030968 P endoplasmic reticulum unfolded protein response
GO:0035497 F cAMP response element binding
GO:0042803 F protein homodimerization activity
GO:0043565 F sequence-specific DNA binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046982 F protein heterodimerization activity
GO:1990440 P positive regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress
Transcript
Level		FPKM:22.92 TPM:23.05
ORF EntryO_BomoSK13866_complete:A_BomoSK_comp13389_c0_seq1
Sequence
(Nucleotide)
TTTTTTTTTTTCCACGTTGGAAGTTGTAGGGAAATGTCATGTTTCCTTTTATTTGTAAAC
TAGTTGTACATAAATAGTAATAAATAAATATTGATACAATAAAATATTTACCTCATTGAA
GTGCAATTATAAAATATGTTATATAAGTGAAGAAGTTTTATACTGTTTACAGTACTATGA
CCTCTACTGAGTTTTTATCGGAACAAAATGAATTCTAAAAATTTTCCGAAAATACAGGAT
TTTTTACTAAAGTATGTCTAGTAATAAGCATTACTAAATCAAAAGTGTAAAAAAAATGGA
ATTCGAAGAAGGCCTCATGTCAGACACGTGGACGGCGCCAAATGAACTCATGGAGATCTT
CTCCATGGACCAGGACTATTTGGATTTTCTCGAGGAGTCAATTCCAGATTTCAACATATG
CTCTGAAAATGTATCAGAAACCTCTAAAGCTATAAGTAGCACCTGTTCAGACAGTGGAAT
TTCCAGTGATCATGCTGAATTCGATTTTGAACAGCAACTGTCCCCGTTTCTCATACAAAA
CTCGTGCGAGGAGGAACTGCCGGCTCCGATAGCCGACGGACCCACGAGCCCCAGCACCCA
GGATGTCGTCATCCGGGATTCGAATGATACGTCCAATAGCTCCACGGACCTCGCGGACGA
CGTCTTCGATATGCAGGACTTCGAGCAGAACGTCGTCCCCGGATTCATTAATGCGAATAC
ATTCCACAGCCCGGGTAAGAACGGGCGAAAACGTCGCCCTTCAACGTCGTCGCTAAATGC
CGTCCAAACCAAACACCACAAGCCGACGATAAAGTTGCCCGGGACCACGCAAAAACCGCA
GCTAATCGTGACGGCCCAACCGCAGAAACCGGTCAAAGTGGCCAACATACAAGTACTGAA
CCCGCAGACTAAAGTCTATTCGAAACCGGTCGAATCAGTCGCGCCCCAGCGGCGAGTTAT
CCGGGTGGCCCCGATGGCGGGAAATCCGCGCTCGATATTGTTGCCCGTCACGATTAAAGA
CATGAAAGATTTGAAATCGATAAAGATTATAAACGCGGCAGACTTGAAGAACGCGTCGAA
TATAAAGTTGGCGGCGGCGAATTTGTTATCGCAAAGCAAACTCAACGACTTGAAAGAATC
CAGAAATGAATACGAGTACGAACACAACAATAATTGCGATGACTCAGGAAGCGAACGCAG
CGACGACGACGACGACCACAAGGAGACTCAGGTCAGCGACGGTCGCAACGGGTACCCGCG
CCTCGTGCTAACCGCCGAGGAGCGCCGCCTCTTGGCGAAGGAGGGCATCACGCTACCCAC
CAGCTATCCGCTCACGAAACACGAGGAACGGGAGCTGAAGAGGATCAGACGCAAAATCAG
GAACAAGATCTCAGCTCAGGACTCGAGGAAACGCAAGAAGGAATATGTCGATGGACTCGA
AGACAGGGTAAAACAGTGTACCGCAGAGAACCAGACGTTAATTAGGAGGATAAAAATACT
GCAGTCACAGAACCAGTCGCTGAGTGCTCAGTTGAAACGTTTACAGAACGTATTAAAGGG
TGCGAGTGGTAGCAGTACGAACAAGTCTGCCCAGCCGGCCACGTGTCTGCTAGTGCTGCT
GTTGTCCGTGGCGCTAGTGGCGCTGCCCTCCCTCCGCGACGAGGCCCCGCCCCGCGCCTC
GCCCGCCTCCCCCGCCGCGCCCGCCTCCCCCGCAGTCACGCGGGCTCTACTCTCCGCCAC
CAACAAAATGACGTTGGATGAGACGGTGATCGACGATGGAGAGTTCAACATGGACGAGCT
GATCACCTTCAACCGCCCGCACTCGGACCACGACTACCAGGTCGTCAAGAGCCTAGACAC
TCACAAGGTTCTGCCAAACGGCTACGTCGACCTCCCCATAGACGAGGACTGGCCGCCTAA
TCTCAAGAAACGTATGAAAAAACTCGAATTCGACTACGAAGACGGCCGGGATTACCTAAC
GCCCGTAGTCAAAGAGGAGAATTACGGCAGTTACAAGATCGAAGCGAAAATCAAACCGGA
TCTCACTGAGGATTTCTTGACGAACACACTGCTGTCCACGGGACGGAAATTAGGAGAATT
GTTCGACATTATGCCGCCGATACCCGTCAAAAACGAAGACATCGTCATTGAGGAGGTATC
CGACCACGAGACCAGAAACACGACCGAAGTCAGGAGTTTTGTTGTCAACGGCACCGCTAA
TAACTTTTAAATATACAATTATTTAATTCCTTTAAAAATTCCGTTTACTTTTTTTTTGTT
ACCTTTTAATAATAATTTTACTATTAGATTTGTTTCCTGAATATTTGTGTTTTTTTTATT
TGTGAAGACGATGTATGTGACTCATGATTCCATATTTTAAGATCAATTTTTATTTTAATA
ATTTTAGTCTTTTAGATTTTATGTGTTAGTGAGATTGTGAAGAATGATTATTACGTAAAT
TAAGATTATAATTTTATATTAAATTACTATATGCGGAGAGTTTATAATTTATTTTTAAAA
GTCAAAATTAATATATATACAATCAATTTTTATATTTTTTACAGAGAAATTACACTTTCA
CTGTGCATGTCTATCTATAATTTTAAGCATTTTATTTTGGGTGCAATTACATTTTAGTTA
CAGATTTAATTGTTCTAGTAAAAGTATAGTTCTATCTCAATATTAGTTTTAGATTATTTT
ATATTATCTACTTACAGAGCGGACAAGATTCACTGTTGTGTTATCCTATACTGATTATTT
TGGTTCGAAA
(2770 bp)

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