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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13377_c1_seq1
Scaffold_idBomo_Chr21
NCBI non-redundant
(nr)		PREDICTED:_protein_SMG5_[Bombyx_mori]
Ontology
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006406 P mRNA export from nucleus
GO:0031625 F ubiquitin protein ligase binding
GO:0032204 P regulation of telomere maintenance
GO:0032210 P regulation of telomere maintenance via telomerase
GO:0035303 P regulation of dephosphorylation
GO:0042162 F telomeric DNA binding
GO:0042826 F histone deacetylase binding
GO:0051721 F protein phosphatase 2A binding
GO:0070182 F DNA polymerase binding
Transcript
Level		FPKM:14.24 TPM:14.32
ORF EntryO_BomoSK13842_complete:A_BomoSK_comp13377_c1_seq1
Sequence
(Nucleotide)
ATGAAAATGACGGATATGTCCATGCAAGGAAAATGCATAGACCTATATAGTTCATTGGGA
AAATGATAATAACGAAATGTTTTTCGTTGGCATATTTAATAAAGTAACACATTGAAGTTA
AAGGAACTTTCTTTTTTAAATCAACATTTTGGTCAGACGATAAAATGACTTGAAAATGAA
GAACGGATGTCTCGATTTATCAGAGGCCAAAATTGCGGAGCGCAATGAACGTGCCAAGAA
ACTTTATCGCTATTTAAGTGATGTAGCAAGACGTATCAATGACATGTCGACTACAAGTAA
ATTTGTGGCAGACCTCTTTACTACTAACATTGAAGTCCAGAGACAAAAGCTGAGGGACAA
TTGTGAGAAGTTACTGTTTCTAGATCCAATTAATTACGGCAAGAAAGCACTTGAACTACT
ATGGAGAAAAGTATATTATGACACTATATCTACTGCCAAAAAGTTGAGAACTGATAGTGA
GCATGACCATTTCCTGTTCACCCTCATCCAATGTGGAATTGGTAATTTTCACCATTTCTT
AGATAGAATTCATTATGAAATGAAAGTAGATTTCAAGGAGTTAGATTATATGCCCAATAC
TGAAGAAGATGAGTTGCAACTATCTTCTGGTAATGTTGAACTATCAAATTTTGGAAAATC
TGCTTTGCACTCATGTTTGATATATTTAGGGGATTTAAGTCGTTATGCAGTGGAAATATC
AAATCACTTTGAACCAACAATTGCTGCTCGATACTACTTACAAGCTGCTCATACTGACTT
TACATTGGGAATGCCTTATAATCAATTAGGAAACCTTTATCTTGAAAAAAATTACAACTT
GGATTCTGTATGTTTTTATATTCACTGTCTTAATTCTAAAAATCCATTTGAAGGGGCCAT
GGGTAATCTTACAAAAATATTTGAGAAAAATGATCAGTTTTACCATACAATAAATGAATC
AGATACTTTAACTCAGGTTGAACATATACAAAATACAATTGTGAATTTTCTTTCATTAAT
TGAGATATGGTACTTGAACAAATCTGATTCTGATATTCCTCAGCGCTGCAGCAAAATCGC
ACAGCAGCTAAAGATTTGTATGGAGTTTAATGAAGCCACACTTCCTGATATTGATAAAAA
TTATGATGATTATCTATCAATTTTGGAACATGAAACCAATTTTCCATCTTATTTAAATCC
AAATCTAATACATCGTATGGTTCTGATTTGTTTATTCACAGTCTCAAAAATGACAGAAAT
TGATGAAACAAAAGCCTTTGCATGCAAAGCTTTCACTCTTGCTCTTTTGTCTCAACTTTT
GTTGAAATTGCTTAAGCAATTGGATTCAATTGGTTTTGTAAATCCTAGGCAGATTCATAA
TTATGGATCTTCAAAACCACACAATGAACAAACAGAAAAATATGAGAACAATAATGATGA
AAATAAAGAAATTATAGAAAGCACAGTGAACAATGGCCAGAATGCAGAACAAGAATTGGA
GGAGCAGAAACAAAATAATGTAAAAGAAAACAATCTAAATGGTCATGCTAAGCATGCAAA
GAAAGCACTTATGAAACGTCGTCGCCGTCGACGCATTGCCTCTTCAGAAAGTTCTGACGT
GAGTGATGCTAATACTGAAAGCAGTGATTTAGATGAAATTGAACATTCATACAGCGACTT
GTCAGATTCCTCTGATCAATCTGTATCACTTAGTGAAGCTAGCGATTGTGATGAAGTTAA
CGATGAAACTAAAGATGAAAGTAGTGAACAAATTAATGAAAAAGTAGAACCAAATAAAAT
ATTGAATGATGATATCACCTCAAAGATTACAGAAACAAATTCACTTAATTCATCAAATTT
ATTGAATTGTAATACAACAAAATCTCAGGAAAACAGCAAAGTAAACACTATAGAATTGAA
AACTTTTTTACAAGGAAACAATTTCATGGCCAGTATCAAGCTGTTGTTGGATTGGATTTT
GATTGAAAAAGATTTAATTCTTTCATGTGGAGACAGCGGAGAGTCCTTGTTTCAATGCGT
TGTAGATTTGTTAAATATTTTTACATTTTATTTCAATACAAAATCTGATGAGGGGACTAA
AGAAGATTGTGAATTAATAAAGTACATTAGAAATTTAGTCATGAAAATGAAACTTGAATA
CAAGACAATACCCTTACCTGAAGATATAAATTTACGGGGAACAAACATTTGTAAATTTGA
TAAAGATGCTGCTGAATGGCACATCTTAGAAAAGTATAAATTATCTGTTTATGAAGAAAA
CGTAATAAGGATTCTTAACTTCATAGATTTTGGGAACCAGATAGCTAAAATTATACCCAG
AATAAGATTTAACAGGACCATGAAATTGTTTTATCTAAAAAACATTCACCCTCCTAAATT
GAATACCAAAATTAACCATAAAAGAAGTAGAGAATGGCATTCAAAGAAAAATACTGAATC
GAATGAAAGTGGATTACTACGGCGCCTTGGTCGACTATGGTTGACATCACAAGTACGCGA
GTTGGAACGCAGCGGACAGTCGGCGGCACCTGCATTACTCGTACTTGACACCGCAGCTCT
TAACAAACACCTCCGTCGTGTCAAACAGCTCCTACTCACAACCAACTTTGTGCTCATGGT
GCCTACAGTTGTGCTACAAGAACTGGACAATTTGAAGCGAGAGCAGAGCACAGCACGTAA
AGCTATCCGTTGGTTGGAACTTCAATTAAAAAATGGCTCAAGATTTCTACGAGCACAACG
TCCGAACCAGTCAAAGCCCCTGCCGCTCTTGAAATATCCCCGTAAAGCTCCAGCCCATAT
TAATAACTTTATTCAGATTTTAGAGTTCTGCAATCATTTCGTAGCGGAAGATAAAAAGAC
GCAAGGATCCGGTGATGCTGAAAACGTTTTACAAGGGAAGTCTTCGTCCGTCCTTATACT
ACTCGTTGGCAATGCTGATGAAGATGAAGAACAGTATAAAGAATTTAGTGTTATGGGCGC
AGCGCAATCGGCCGGCATTTCCGTAGAAAACATCGTAGATTTCTACAGCAAATGGCGACA
GACATCGCATAAAAACGGTAAAAAGAGGTGAACGCGTGTCGATCACGAGACCGGTTTTGA
TCACTATGGAAAGAATGGACTTCGAGGATATCGATAAAACGTCAAAAAGCTCTTGCGAGG
TTTTGATAGGACACGTCCAAAACGCTCACTATACACTATAC
(3221 bp)

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