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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13367_c1_seq3
Scaffold_idBomo_Chr3
NCBI non-redundant
(nr)		PREDICTED:_integrin_alpha-PS1_isoform_X1_[Bombyx_mori]
Ontology
GO:0004872 F signaling receptor activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0005925 C focal adhesion
GO:0007015 P actin filament organization
GO:0007155 P cell adhesion
GO:0007157 P heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0007160 P cell-matrix adhesion
GO:0007229 P integrin-mediated signaling pathway
GO:0007411 P axon guidance
GO:0007414 P axonal defasciculation
GO:0007424 P open tracheal system development
GO:0007426 P tracheal outgrowth, open tracheal system
GO:0007427 P epithelial cell migration, open tracheal system
GO:0007431 P salivary gland development
GO:0007432 P salivary gland boundary specification
GO:0007435 P salivary gland morphogenesis
GO:0007475 P apposition of dorsal and ventral imaginal disc-derived wing surfaces
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007494 P midgut development
GO:0007608 P sensory perception of smell
GO:0008305 C integrin complex
GO:0009925 C basal plasma membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016203 P muscle attachment
GO:0016324 C apical plasma membrane
GO:0016328 C lateral plasma membrane
GO:0016337 P cell-cell adhesion
GO:0016477 P cell migration
GO:0030154 P cell differentiation
GO:0033627 P cell adhesion mediated by integrin
GO:0034446 P substrate adhesion-dependent cell spreading
GO:0035160 P maintenance of epithelial integrity, open tracheal system
GO:0046982 F protein heterodimerization activity
GO:0048567 P ectodermal digestive tract morphogenesis
GO:0050839 F cell adhesion molecule binding
GO:0050840 F extracellular matrix binding
Transcript
Level		FPKM:1.18 TPM:1.19
ORF EntryO_BomoSK13791_complete:A_BomoSK_comp13367_c1_seq3
Sequence
(Nucleotide)
GCTAGTTCTCCACGTGTTTAAATAATGCGAACGTAGTTTTAGTATTTAGCGACACATTTT
TAATTCAACAGATGATCGAACACGGATTGTATTATACATACTTAGAAATTTAGAGTCATT
AGAGAATGTAGAAATGTGCACTTTGATAATTTACTACCTGGATTTACGTTAGGAACTGTC
ATATATGTTTAAGCAAATTTATAGATATTAACTAAAATGTTGTCTTTTGTCGATGGTGTC
CCAAACAGCGGAGTACGGCACGATAAATACGACACTGGATTCTGATCATCTATCGGGTCC
TTATTCAGACGAGATCAAGGAAGGCCAATGGCTCGGCGTGACTGTTCGAAGTCAGGGTCC
TGGCAAAAAGGCTGTAGTTTGTGCTCACAGGTACATTCGAAAGATTGGACAACTGCAATT
CGGCCAAGGACTGTGTTACACTTTCAAAAACACTCTACAACTACACGAAATCACTGAACC
TTGTAGAGGAAGACCTATTACTAGAGAACACGAAGAATATGGTTTCTGTCAAGTAGGAAC
AAGCAGTACTCTATTGGATGATGAAACATTAATCCTCGGCAGTCCGGGACCGTATGCCTG
GCGAGGAACAATATTCGCACAAGATATGACCGACGAAATGTTTGCCCGAGATAATGTGGT
CTATAGTGCACCTGTCACTGATGGTGCTAGTCCTGTCGAGAAATACAGCTACCTGGGAAT
GTCAGTAGCAGGTGGAATGTTTTTTGGAAACAAGTCCTCTTACGTAGCCGGTGCACCCCG
GGCCCAAGGGACTGGTCAAGTTGTAATTTTCAACAAAAAAGACACCGCTGATTGGGGCAG
AACGGACTTAGATATTCTTCGTTTTACACTCATTCTGAAAGGGGAACAGTTTGGGTCCAG
CTTTGGATATGAAGTGGCCGTGGCTGATGTTAATGGAGATGGATTGCCGGATCTTCTAGT
CGGTGCACCATTTTATTTTTCACGAGATGCCGGTGGTGCAGTGTACTTATATCTTAATAA
AAATCAAAACTTAACAAAAAAGTTCGATTTAAAGTTGACTGGAAAACAAGAATCACAGTT
TGGTATTTCCATTGCTAATGCATCAGACTTAAACAAAGATGGTTGTCAAGATATAGCAAT
CGGTAGTCCTTACGAAGGGAATGGAGTTGTGTATATTTATATGGGTAACCGTAGAACTGG
TTTGAATTCAATACCAGATCAGGTTATTTCAGCTGAAAGCTTACCAATCGTATTGAAGAC
ATTTGGCTACTCGCTTTCAGGGGGTATTGATTTAGATGCTAATGGATATCCTGATTTGTT
AGTTGGCGCGTATGAGAATAGCAGCGTCGCTTTAATACGAACGAGACCGATCATTGACAT
AAAGACGTCAATACGACCATCGAATACTATAATTAATATCGACCCGACGAAGCAGGGCTG
TGAAAGAGATCCATCCTCAAAGTATACATGTTTCCACTTTCAAGCCTGCTGTACAATCGA
ATCTTTGGTGAAATCCACAAAAACGAATGCTCTAAAGTTGAATTATGTAATTGAAGCAGA
AACTTTCCTTGGCGGGAAAAGATATTCTAGGGTGTTCTTGGATACAGAAAAGACGAACAT
AGTTAAAAAGTCAATTGTTCTGGACAAAGAAATCGAAGATTGCAGAGAACACATTGTTTA
CATAAAAAACAATACAAGAGATATTCAAACCCCAATAAAGTTCCAAGTGACATATAAATT
GGAGAATGTCGAGCCGCAATATTCTCCCTCTGGCACTTTGCCCAACATCGATGATTACCC
TGTTCTCAATGCGACAGCGATGACAACCTTCAGCGCTCACTTCTTGAACGACTGCGGGAC
TGATGCGATTTGTGTTAGTAATCTAATCGTCAATCCTGTTTTACAATTACCAAAAACGTC
AGATGGCAAGTCGTACGCGCTCACATTAGGCCAAGAGGAAGAAATTAAGCTGTCAATAAC
TGTAGACAATTATGGGGAGTCAGCATACGAGAGCCAACTTTTCGTACAACACCATTCAAG
TTTACATTACATCGCTGCAAATATAAGTGACAAGAACGTGATATGTACGAGTGTCAATAA
AACGATAGTATCTTGTATGCTGGAGAATCCTTTCAAGAAGCAGCCGGAAAGTGCGGCTCC
CATCACAATGAGGTTCGACGCAAGAGCACTTGAAGACAATGAGCCTTCAGTAGTGTTCAC
AGTTTGGGCTAATTCTACCTCCAAAGAATTGCACTCTGGGAAGAAGCCGGTTCAAGTCGA
AGCCCTTGTAATTAAGAATGCTGAATTACTAATTAAAGGAGCTGCCCGACCAGAACAAGT
TTTCTACGGAGGAGATATAAAAGGAGAATCTGCCATGACTTACTTCGATGACGTCGGTAC
AAGAGTGGTGCATACTTACCAGGTATTCAATGAAGGCCCTTGGCGCGTGTCTTCCGTGCA
AGTTGTTATATTGTGGCCACATCAGGTAGCTTCTGAAAACGCACAGGGCAAATGGCTACT
GTATCCCGAAGATGTTCCTACCGTCGACGGCGAAGCTGACCAGAGTAATGGTGAGTGCTT
TATCACAGAAAAAGAGATTAACCCCTTAAACCTGACGTCCAGACCTGGAACATTTGAGCC
TTATTTAGAAAACTTGGAGATAAATCCATTCATGAGTACTGGAAAGATCAGCGTGAACTC
TTATGAAAAACAACAAAATCAAAGTAAAGTTGTAGAATTATCTACTGCCAAGGAAAATAA
AGTGAGAAGAAAAAGAGATAGTGACGTAGTTAAAGCCGAAGCATATACGGACAAAGATGG
GCAGAGAAAACATGTGGTTAATATGAGCTGCCAAAAGAAGACAGCGAAGTGCATACAATT
TCAATGCGTGATCTATCGACTATCTCGGGCTCAGGCCACAACCATTACTGTGAAGGCTCG
ACTTTGGAACGCTACACTAGTAGAAGATTATCCCCGAATCAGCCATGTCAACATCGCTTC
TACTGCGTTCATACATATACCAGATCACTACAACATCCATCAAAGCAAACAACACGATGA
TACCGCCACGGTTGAAACAGTCGCATATCCGGATTTGAAGATCAGCGAGCCCACAGAAGT
TCCTCTTTGGGTCATCATTATATCAGTAATTATTGGACTAATCGTTCTGATACTCCTCAT
CTTAGCCCTTTGGAAACTGGGCTTCTTCAAGAGAAGTCGTCCTGACCCTACTCTCTCAGG
AAACTTGGAGAAAAACCACCACGAATCCAGTCCGTTCATAGGAAGAGATAGAAATAGCAT
TCGATAGCTAATACCGTGTGTGTTGAACACAATTTTCTGTGACAGACAGTGACAGAAGTG
TAAATAGTTAAATCTTGGACTAGGAATATTTATATCCCCGACTGTGATGTTATCTCTGCG
ACTATGTTATATCTTCTTTGAGGAGAATTGTGTGAATGTGATTGTTCTAAAATTATTTTA
CGTATGTTGACAAAAGTACATGTTTTATTTTTAAATGCATTTTTAGTTTTACGCATTTTT
ATGTTTATAATTATATATTATTATATATATTTGCAATTTATGTATGTATATATAAATTTG
GTAGAACTAACAAGCCACGGGGCAGTTAATATTTCTGGATTTACAACCGGGCCAATTTAC
CGTTCTATGAAAGAAATTGACGCGTTTCAGATCAATAAAATTATTGTCAATGACTAATTT
CTAATGTATTGTGTCTTTTGGTCATATCTATAAACAAATTTAGAACGAAATATATTTCTT
AGTGAATTGTTTTTTGAACGATTACCCATTTCGACTTTTCTCAGTTGTGAATGTCATTTA
AATAAAGGTTAGTTTATTTATTGCTTAGTGTCATGAAGGATTTCACGGTCGATGTGTAAA
GTGATTACCGGCCCCCTTCACAACTTGAACGAAACCGATTTTGAGATATGAGGTCGAAGT
TACAATTATTATACAACTGTCTTCAAGCCAGAAAACTGGGTGTGTCGCAGCCGAAATAGA
CACGAAATGCCCCACAACCGATGTAAAGAAATATGTATTTAATTACTTCATGTGAGAGTA
ACAGACTGAGTAGTGTTGGTTCTTTAAATCTATATTTTTCTGTAATGAACCGAATCTAAA
ATATATTAGAGACATTGAAAAATTCAACAATATCTAAAGTGCCAATTTTATTATACATGC
GAAGATCAGTTTTCTTGCTTTGCATGCAAATGTTACATTTCTTTCTGAACTCAATCAAAT
AATCAAAATATAGCTGATTAAAATCAATATTTTAGGAATACTATTACGTCTTACGTAAAA
ACGTGTCCAGTCCCGTGGTTTCTTAGTTCAAGGTAAATAATTATTGCCATATTATTTATG
AATAGTTTAAGCGTATTATTATGACTAGATTATTTTGCTAGTCAAGAACCTTAATAATAT
TTACCGACGTCCGGCTGTACGTAGCGGAGACTCGTAAATTGTTGATTTCACATTTGTTTT
TCTATTTACGTAAGTACTTAAAGAATTGAAGCACTATATTGACATTACCAAACTATGTTA
TAAGTAGTATAATTTTATACACGACTTTGCTTGTTAACTTCGTAGGTGCCTACTATTATT
TAAATGTAAATTATTGTAAATATACATGTACTTAAGAATAAATTATCTTTCGTTTGAGGT
ATTCAAAATTTATACTAAGCGCACTGCCAAGAAGACTTACTACATATTTGTACATGATAA
TAATAATAATAAAAATGATCACGTATTTAAATTAAAACACTGGTTGTGATTACTTTACAA
TTTTCAACAGTTTAATGTCTACTTAAATAGTTCAGTAGAATTTGAATAAATTGTGCCATT
TTGATACAAAGCAAAGGAGTAGCCATTGTTTCACTAAAGAAATTCAGAGAACGA
(4914 bp)

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