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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13367_c1_seq1
Scaffold_idBomo_Chr3
NCBI non-redundant
(nr)		PREDICTED:_integrin_alpha-PS1_isoform_X1_[Bombyx_mori]
Ontology
GO:0004872 F signaling receptor activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0005925 C focal adhesion
GO:0007015 P actin filament organization
GO:0007155 P cell adhesion
GO:0007157 P heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0007160 P cell-matrix adhesion
GO:0007229 P integrin-mediated signaling pathway
GO:0007411 P axon guidance
GO:0007414 P axonal defasciculation
GO:0007424 P open tracheal system development
GO:0007426 P tracheal outgrowth, open tracheal system
GO:0007427 P epithelial cell migration, open tracheal system
GO:0007431 P salivary gland development
GO:0007432 P salivary gland boundary specification
GO:0007435 P salivary gland morphogenesis
GO:0007475 P apposition of dorsal and ventral imaginal disc-derived wing surfaces
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007494 P midgut development
GO:0007608 P sensory perception of smell
GO:0008305 C integrin complex
GO:0009925 C basal plasma membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016203 P muscle attachment
GO:0016324 C apical plasma membrane
GO:0016328 C lateral plasma membrane
GO:0016337 P cell-cell adhesion
GO:0016477 P cell migration
GO:0030154 P cell differentiation
GO:0033627 P cell adhesion mediated by integrin
GO:0034446 P substrate adhesion-dependent cell spreading
GO:0035160 P maintenance of epithelial integrity, open tracheal system
GO:0046982 F protein heterodimerization activity
GO:0048567 P ectodermal digestive tract morphogenesis
GO:0050839 F cell adhesion molecule binding
GO:0050840 F extracellular matrix binding
Transcript
Level		FPKM:14.13 TPM:14.21
ORF EntryO_BomoSK13789_complete:A_BomoSK_comp13367_c1_seq1
Sequence
(Nucleotide)
GCAAAGTGCGGCGGGAACTAAATTTTACTGAATACTCGGCCGGTGTACGGCAACCGCGCT
GGGGGTCTGTGTTTTCGCGGCGATAATTTCGAAGCACGCGATGTTCTCAATAGTAACATA
ACAGTGAATGTGTTATTTAGTTATACGAAATCAACGAACAACGTACACGATGGCAGCGAG
ATATGCGTCCAGTAGTGTTTTATTTTTGTGTATATTGTACAGTGTCTCCTGTTTCAACTT
GGAACCGAGGATCCCCGTGATAAAGTACGGAGAGGCCGGCTCATACTTCGGATTTTCAGT
AGCTGAACACATAACTTTCAACCAAGACGGAAGTCAAACTAGTTGGTTACTTGTTGGAGC
TCCGTTAGATCAAAATCTACAACCGAACACAACAAAGTCTGGCGCTTTGTGGAAATGCAG
TCTCAGCCCAGACACGAACGACTGCGAGCAGATTATTACAGACGGGAAACGAACGGAGTA
CGGCACGATAAATACGACACTGGATTCTGATCATCTATCGGGTCCTTATTCAGACGAGAT
CAAGGAAGGCCAATGGCTCGGCGTGACTGTTCGAAGTCAGGGTCCTGGCAAAAAGGCTGT
AGTTTGTGCTCACAGGTACATTCGAAAGATTGGACAACTGCAATTCGGCCAAGGACTGTG
TTACACTTTCAAAAACACTCTACAACTACACGAAATCACTGAACCTTGTAGAGGAAGACC
TATTACTAGAGAACACGAAGAATATGGTTTCTGTCAAGTAGGAACAAGCAGTACTCTATT
GGATGATGAAACATTAATCCTCGGCAGTCCGGGACCGTATGCCTGGCGAGGAACAATATT
CGCACAAGATATGACCGACGAAATGTTTGCCCGAGATAATGTGGTCTATAGTGCACCTGT
CACTGATGGTGCTAGTCCTGTCGAGAAATACAGCTACCTGGGAATGTCAGTAGCAGGTGG
AATGTTTTTTGGAAACAAGTCCTCTTACGTAGCCGGTGCACCCCGGGCCCAAGGGACTGG
TCAAGTTGTAATTTTCAACAAAAAAGACACCGCTGATTGGGGCAGAACGGACTTAGATAT
TCTTCGTTTTACACTCATTCTGAAAGGGGAACAGTTTGGGTCCAGCTTTGGATATGAAGT
GGCCGTGGCTGATGTTAATGGAGATGGATTGCCGGATCTTCTAGTCGGTGCACCATTTTA
TTTTTCACGAGATGCCGGTGGTGCAGTGTACTTATATCTTAATAAAAATCAAAACTTAAC
AAAAAAGTTCGATTTAAAGTTGACTGGAAAACAAGAATCACAGTTTGGTATTTCCATTGC
TAATGCATCAGACTTAAACAAAGATGGTTGTCAAGATATAGCAATCGGTAGTCCTTACGA
AGGGAATGGAGTTGTGTATATTTATATGGGTAACCGTAGAACTGGTTTGAATTCAATACC
AGATCAGGTTATTTCAGCTGAAAGCTTACCAATCGTATTGAAGACATTTGGCTACTCGCT
TTCAGGGGGTATTGATTTAGATGCTAATGGATATCCTGATTTGTTAGTTGGCGCGTATGA
GAATAGCAGCGTCGCTTTAATACGAACGAGACCGATCATTGACATAAAGACGTCAATACG
ACCATCGAATACTATAATTAATATCGACCCGACGAAGCAGGGCTGTGAAAGAGATCCATC
CTCAAAGTATACATGTTTCCACTTTCAAGCCTGCTGTACAATCGAATCTTTGGTGAAATC
CACAAAAACGAATGCTCTAAAGTTGAATTATGTAATTGAAGCAGAAACTTTCCTTGGCGG
GAAAAGATATTCTAGGGTGTTCTTGGATACAGAAAAGACGAACATAGTTAAAAAGTCAAT
TGTTCTGGACAAAGAAATCGAAGATTGCAGAGAACACATTGTTTACATAAAAAACAATAC
AAGAGATATTCAAACCCCAATAAAGTTCCAAGTGACATATAAATTGGAGAATGTCGAGCC
GCAATATTCTCCCTCTGGCACTTTGCCCAACATCGATGATTACCCTGTTCTCAATGCGAC
AGCGATGACAACCTTCAGCGCTCACTTCTTGAACGACTGCGGGACTGATGCGATTTGTGT
TAGTAATCTAATCGTCAATCCTGTTTTACAATTACCAAAAACGTCAGATGGCAAGTCGTA
CGCGCTCACATTAGGCCAAGAGGAAGAAATTAAGCTGTCAATAACTGTAGACAATTATGG
GGAGTCAGCATACGAGAGCCAACTTTTCGTACAACACCATTCAAGTTTACATTACATCGC
TGCAAATATAAGTGACAAGAACGTGATATGTACGAGTGTCAATAAAACGATAGTATCTTG
TATGCTGGAGAATCCTTTCAAGAAGCAGCCGGAAAGTGCGGCTCCCATCACAATGAGGTT
CGACGCAAGAGCACTTGAAGACAATGAGCCTTCAGTAGTGTTCACAGTTTGGGCTAATTC
TACCTCCAAAGAATTGCACTCTGGGAAGAAGCCGGTTCAAGTCGAAGCCCTTGTAATTAA
GAATGCTGAATTACTAATTAAAGGAGCTGCCCGACCAGAACAAGTTTTCTACGGAGGAGA
TATAAAAGGAGAATCTGCCATGACTTACTTCGATGACGTCGGTACAAGAGTGGTGCATAC
TTACCAGGTATTCAATGAAGGCCCTTGGCGCGTGTCTTCCGTGCAAGTTGTTATATTGTG
GCCACATCAGGTAGCTTCTGAAAACGCACAGGGCAAATGGCTACTGTATCCCGAAGATGT
TCCTACCGTCGACGGCGAAGCTGACCAGAGTAATGGTGAGTGCTTTATCACAGAAAAAGA
GATTAACCCCTTAAACCTGACGTCCAGACCTGGAACATTTGAGCCTTATTTAGAAAACTT
GGAGATAAATCCATTCATGAGTACTGGAAAGATCAGCGTGAACTCTTATGAAAAACAACA
AAATCAAAGTAAAGTTGTAGAATTATCTACTGCCAAGGAAAATAAAGTGAGAAGAAAAAG
AGATAGTGACGTAGTTAAAGCCGAAGCATATACGGACAAAGATGGGCAGAGAAAACATGT
GGTTAATATGAGCTGCCAAAAGAAGACAGCGAAGTGCATACAATTTCAATGCGTGATCTA
TCGACTATCTCGGGCTCAGGCCACAACCATTACTGTGAAGGCTCGACTTTGGAACGCTAC
ACTAGTAGAAGATTATCCCCGAATCAGCCATGTCAACATCGCTTCTACTGCGTTCATACA
TATACCAGATCACTACAACATCCATCAAAGCAAACAACACGATGATACCGCCACGGTTGA
AACAGTCGCATATCCGGATTTGAAGATCAGCGAGCCCACAGAAGTTCCTCTTTGGGTCAT
CATTATATCAGTAATTATTGGACTAATCGTTCTGATACTCCTCATCTTAGCCCTTTGGAA
ACTGGGCTTCTTCAAGAGAAGTCGTCCTGACCCTACTCTCTCAGGAAACTTGGAGAAAAA
CCACCACGAATCCAGTCCGTTCATAGGAAGAGATAGAAATAGCATTCGATAGCTAATACC
GTGTGTGTTGAACACAATTTTCTGTGACAGACAGTGACAGAAGTGTAAATAGTTAAATCT
TGGACTAGGAATATTTATATCCCCGACTGTGATGTTATCTCTGCGACTATGTTATATCTT
CTTTGAGGAGAATTGTGTGAATGTGATTGTTCTAAAATTATTTTACGTATGTTGACAAAA
GTACATGTTTTATTTTTAAATGCATTTTTAGTTTTACGCATTTTTATGTTTATAATTATA
TATTATTATATATATTTGCAATTTATGTATGTATATATAAATTTGGTAGAACTAACAAGC
CACGGGGCAGTTAATATTTCTGGATTTACAACCGGGCCAATTTACCGTTCTATGAAAGAA
ATTGACGCGTTTCAGATCAATAAAATTATTGTCAATGACTAATTTCTAATGTATTGTGTC
TTTTGGTCATATCTATAAACAAATTTAGAACGAAATATATTTCTTAGTGAATTGTTTTTT
GAACGATTACCCATTTCGACTTTTCTCAGTTGTGAATGTCATTTAAATAAAGGTTAGTTT
ATTTATTGCTTAGTGTCATGAAGGATTTCACGGTCGATGTGTAAAGTGATTACCGGCCCC
CTTCACAACTTGAACGAAACCGATTTTGAGATATGAGGTCGAAGTTACAATTATTATACA
ACTGTCTTCAAGCCAGAAAACTGGGTGTGTCGCAGCCGAAATAGACACGAAATGCCCCAC
AACCGATGTAAAGAAATATGTATTTAATTACTTCATGTGAGAGTAACAGACTGAGTAGTG
TTGGTTCTTTAAATCTATATTTTTCTGTAATGAACCGAATCTAAAATATATTAGAGACAT
TGAAAAATTCAACAATATCTAAAGTGCCAATTTTATTATACATGCGAAGATCAGTTTTCT
TGCTTTGCATGCAAATGTTACATTTCTTTCTGAACTCAATCAAATAATCAAAATATAGCT
GATTAAAATCAATATTTTAGGAATACTATTACGTCTTACGTAAAAACGTGTCCAGTCCCG
TGGTTTCTTAGTTCAAGGTAAATAATTATTGCCATATTATTTATGAATAGTTTAAGCGTA
TTATTATGACTAGATTATTTTGCTAGTCAAGAACCTTAATAATATTTACCGACGTCCGGC
TGTACGTAGCGGAGACTCGTAAATTGTTGATTTCACATTTGTTTTTCTATTTACGTAAGT
ACTTAAAGAATTGAAGCACTATATTGACATTACCAAACTATGTTATAAGTAGTATAATTT
TATACACGACTTTGCTTGTTAACTTCGTAGGTGCCTACTATTATTTAAATGTAAATTATT
GTAAATATACATGTACTTAAGAATAAATTATCTTTCGTTTGAGGTATTCAAAATTTATAC
TAAGCGCACTGCCAAGAAGACTTACTACATATTTGTACATGATAATAATAATAATAAAAA
TGATCACGTATTTAAATTAAAACACTGGTTGTGATTACTTTACAATTTTCAACAGTTTAA
TGTCTACTTAAATAGTTCAGTAGAATTTGAATAAATTGTGCCATTTTGATACAAAGCAAA
GGAGTAGCCATTGTTTCACTAAAGAAATTCAGAGAACGA
(5139 bp)

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