SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13365_c0_seq1
Scaffold_idBomo_Chr25
NCBI non-redundant
(nr)		PREDICTED:_AT-rich_interactive_domain-containing_protein_4B_[Bombyx_mori]
Ontology
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0004407 F histone deacetylase activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006349 P regulation of gene expression by genomic imprinting
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0007283 P spermatogenesis
GO:0016575 P histone deacetylation
GO:0017053 C transcription repressor complex
GO:0034773 P histone H4-K20 trimethylation
GO:0036124 P histone H3-K9 trimethylation
GO:0044212 F transcription cis-regulatory region binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048821 P erythrocyte development
GO:0080182 P histone H3-K4 trimethylation
GO:0097368 P establishment of Sertoli cell barrier
Transcript
Level		FPKM:7.34 TPM:7.39
ORF EntryO_BomoSK13784_5prime_partial:A_BomoSK_comp13365_c0_seq1
Sequence
(Nucleotide)
AGATAAAGAGAAAGAGAAAGAAAAGGAAAAGGAAAAAGATAAAGAACGTGAAAAATCAAC
GTCGACTACCACGAGCGAAGAGAAAGTGCTAGTGAAACCACGTTCGCAGTCTAAAGGACG
TTCCTCGATGCCGCCTTCTAAACCAGACTCTCACGACAAGCGGACACCGAAGAGACGCCC
ACTATCCTCGAAAAGCGAGAGCGCAGGCTCAAGCACTTCGAGAGCCTCACGCCGACCTCA
CGTCTCAACGGACAGTGATAGCTCCGGCCGTGCTTCTAGGTGCGGTATAACTAAGAAAAT
GCAAAGCCGCCGTAGTCAAAGCGCGAACTCGGCCAGCAGCGGAAACACCATTGCCTCCAA
CAGCAGCAAAAGACCACGCAAAAGAAAAACGACGGAGCCATCCACTAATGAGCCGATGCA
TACGCGCGTGTCGAACGTGAAAGCTCAAGTCGGTGACAAACTGAAAGTTTATTATGGACC
CACACAGTCTGAATCTAAGGTCACGTACGAGGCTAAGGTAATAGAAATTTCGTCTGAGGG
TATGTTGAGAGTACACTATACCGGCTGGAACACTCGCTACGACGAGTGGATCAAACCGCA
GAGGATTGCACTCAACGTTACACAGCACGAACAGCGCAACAAAAAGGGTACCGGGATGAG
TAGACGTGTCCGTGCTAAGATGAATGAAGAGTCATCAGCTCGGTCTGATTCCGACAGTGA
CTCGGATAGCGACGTCGATCTGAAGAGACCACCAAAAAAACTGGATGAAAAAGGCCCGCC
TTCTAAAATTTTACCACGACCGAAAGAAGCAAAGACGGGTGAGAGCAGTGGCTCAAATAA
ACCACGCAAGAGACCCGTACGTACAGTCTCTACGCCGACTAATCTTTCTCCAAGCAAGAA
ACCACGACCGATGCCCACCACTTGCCATCAGGGACGAGACTTCGATCTGAACGAAATCAG
ATCGGAGCTAAAAGGACTACATTCAGTCAAACAGGACCACGATGAATCATCATTGAAACA
AGATCCACATGACAAAACATCTAGGCTCATGCTTCCGGCAGCTACGATGTCGGCCGCCCC
CGCGGAACCCCCGCAACCCGATAAACAAGCCGAGGACGTGTACGAGTTCAAAGAACCAGA
ACCATTCGAACTGGAGCTGCACGACGAAAAGAAAAAAAGGACTCATCGAATATTCGACGA
TATTTCCCCCAGTAAATACACATCAACGTTATCGAAATCGTTGAGTGAAGAAATCTCCGA
AGATCCCTTAAGACCGCGTCCTTCGACTTTAAGATCACCCTCGCTGTCGCCGTTCAGAGA
TTTCGGAGGGACTCGTGCTCTCGAGCCAGGTAGACAAAGTCCCGAAGAAGACCCTAAAGT
ATGTCTATTCGGTTTGGACGACGACTCATTCCAAGGCGATGGCAGTTCGGGCCCCACTTT
CGAAGGGTTCACTCCTGCTAAAAATCAAGAGACTTACTCTAAGAAGAGTAAAGTGTCTAA
GTTAAGAGAACTCATCGACGATTCGCCGGAAAGTCCGGCTGATGACGAACATTCTTCAGA
GGATGAGCAAGACTTGATGGTAAAAGGCGAAAAAGCGGTAAGTGAACCAAGCCCTGCTGC
TCCCCAAGTGGAAACTGAGAAAATAACGGAAAACGTTAAAGAATGTGTCGCTTCAAAGGA
ATTAGTGACACAAATAATACTGGAACCAATAATTGAAACGAATACAGAAACTAAATACGT
TACAGAAGAAGCCGTAAAGCAAAAAGAAGTACCGATGGAGATAATCATAGCGCCCGAACG
CCCAAAAACACCGCCACAGCAAAGAAAAGAAATACATAAAGTTAACCTACTCTCCGTCCC
CGTATCCATTTCTAATGTCCAAATGAATGTGACGCTTACTGTTGCTAATCCTGTTCTGAA
ACAAGAACCGGTCAAAGAATCGTCACTTAAATTGCTTACGGTTCCAAAAATAGTAACGGA
ACCTAAAGAAAACATTCCGCAAATGAAGATTGAACAAAACATGGACCCAGAACCTGTAGT
TTCGAAGTTTGAACCTCCCTCGAGCCCTCTGATTGACACAGAAGAAGATAAGTCGGAACC
CGACAGTCCGGCGAGAATTGATGTCATCCCCGAACCGCCCCCTGGATTCTTATTACAGTC
CGAGGGACCGAAGATAGCGGAGAAATTGCTTAAAGCCATCAACAGTGCCAAGAGGCTCTC
GATGTCCCCGCCACCCACGGACGATAGATCGGATGCGTCCAAAACGGAACCCAATAAATT
TAACAAACCCGAGATAAAAGTTTCTTCCCAATCACCAGAACTGAAAACGATCTCATCAAA
ATCTGACACGGTCAAGCCGTTAGTTAAGTCGGAACTCAAGAAAGTCCGAACTCCAGAAAT
CAGCGAGTGTATATTCGGCGAGCCGTCGAACTTAACGGATGCGAAGCGAGACGCGACCGA
CGTTAAGAAAGTTAGACCCAAAGACGAAATCAGGAAAGAGGTTTTATCTCCACGCTTACA
GAGCCCATTAAACATACTTGAGCGGCGGCGTAGTGTTGCCGACTTACCATTAGCAGTGCC
CGCTCAGAAGAACAATAAAGTTCTCAGCGACACGATACAAAAGTTGTCGAGCCAGATCAA
CCAGTCGGCGGCCGCTGCCGTCCCCTTGCCGCTGCCACCGTTCCCGCAAGCCGACAGGAG
CGAATCCAGCGATTCCGACGATTCCGATCGGAGGTTAATAATCGACAAAGTGGAAGAGTG
GGGCGGCAACAGTTGCGAGACGTCGCGGGCGAGCGGTGCGGCCGCCCTGGCGAGCCTACA
CGCCGGGAAGTCGGCCGGCGAGTGGAGCGCCGGAGAGTCCCTGCTCATGCTCGAAGACGC
TTGCAAGAACGAAAGGAAGCATAGTGCAAGCGTAGTGGTGGCTGGCAGCGGCAGCGGCAG
GGCAGCGGGGGTTGTCGGCGGGGGGGAGGAGGACAGCAACATTTCGCTGCTGCTGTGCGA
GGAGACCATCCCCGGCTCCCCCGCGCCCGACGCCGAGCCGCAGCCGCCCCGCCACCGCCT
GCACATGCCCTTCGCTTCGGCGCCACAACACCATCACTCGCTTTCTAAAGAGGATCGTCG
CGGCGAAGGTCCGTCCCGTCCGATGGTGGCAGCGG
(3155 bp)

- SilkBase 1999-2023 -