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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13352_c1_seq2
Scaffold_idBomo_Chr15
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_transcription_initiation_factor_TFIID_subunit_6-like_[Bombyx_mori]
Ontology
GO:0001075 F RNA polymerase II general transcription initiation factor activity
GO:0005634 C nucleus
GO:0005669 C transcription factor TFIID complex
GO:0006351 P transcription, DNA-templated
GO:0006352 P DNA-templated transcription, initiation
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0007221 P positive regulation of transcription of Notch receptor target
GO:0022008 P neurogenesis
GO:0046982 F protein heterodimerization activity
GO:0051090 P regulation of DNA-binding transcription factor activity
GO:0051123 P RNA polymerase II preinitiation complex assembly
Transcript
Level		FPKM:7.51 TPM:7.55
ORF EntryO_BomoSK13756_complete:A_BomoSK_comp13352_c1_seq2
Sequence
(Nucleotide)
AAAAACTAAGAAGAAGAATATGTTGTACCAAAAAAATCTATGGTAGAATGTCTACTTGTA
TCCAAATAGTAAATAAATTAGGGTACACAGGTACATACCTACCTACTTATCTACATTAAT
TAACTTTACCTTATCACAACAGGAAAATATCAGAAAAAAGCAGGAATAAAAAATTAAAGA
TTAACCCAAAGAATACAGTGATACAAGGGGTCTATCGTAATCGTAACCAATTTGGTGATA
AATCATTGTTTAATGCTGTAGTCAACGTATCTTAAAGATTTAATTTCTATCATGGGCGAC
TCAGAATTGGCTTATGGATCTTCGTTAACGTTGGATTCCATGAAAGTGATAGCAGAGAGT
GTTGGTATCGCCACTCTTGGCGATGACGCTGCTAAGGAACTCGCTGATGATGTTACATAT
CGCTTGAAAGTGATTGTTCAAGATGCCATGAAGTTCATGCATCACTCAAAGAGACAAAAA
CTTTCCATTACAGATATAGATCATGCCCTGAAGATAAAAAACAATGAGTGTCAATATGGA
TTTATTCAGCCTGATTCGCTGCCATTTAGGTTCGCATCTGGAGGAGGTAGAGAACTCCAT
TTCATTGAAGAAAAAGAGATAGATCTTTCGGAGATCCTATCAGCACCACCCCCAAAGGTT
CCATTGGATGTATCTGTTCGTGCACATTGGCTAAGTGTGGATGGGGTTCAACCAACAGTA
CCTGAAAATCCACCACCGCTTTCAAAAGAAGCTCAGAAACTTGAATCTGTTGATCCAATA
AGTAAACTGAGTAAACCAAGCAATAAAGATTCTGCAGGTAAACCTATATGTGGCAAAGCA
GCAAGATTGAAAGCATCAGAATCTGTGCATGTTAAACAGCTTGCTACCCATGAATTGAGT
GTTGAACAGCAGCTCTATTATAAAGAAATCACAGAAGCCTGTGTTGGCAGTGATGAAACA
AGACGTGCTGAAGCGCTCCAGTCCTTAGCTTGTGACCCAGGACTACACGAGATGTTGCCC
AGAATGTGTACTTTTATATCTGAAGGTGTGAAGGTTAATGTCGTACAAAACAATCTGGCT
CTTCTCATTTACCTGATGCGAATGGTTAAGGCACTACTTGATAACCAGTCACTATATTTG
GAAAAATATTTACACGAGTTGATTCCGTCCGTGTCGACATGCATAGTATCACGACAGCTG
TGCCTTCGTCCCGAGATGGATAACCACTGGGCCCTGCGAGATTTCGCCGCGCGACTCATG
GCTCAGATATGCAAAACATTCAATACTTCAACCAATAATCTACAAACGAGAGTCACCAGG
TTGTTCGCGAAAGCCCTCCAGTGCCCTTCACAAACAAACAACGAAACGGGTCCTTCTATG
GCGAGCATGAAGGAATCGGAGAAGACTCCTCTCGCGTCGCTGTATGGAGCCGTGCAAGGA
TTGGCAGAGCTGGGCCCCGAAGTCGTTAAAGTGTTCATTCTGCCGCGCGTGCGTTGGTTG
GGAGAGCGCGTGGAGGGCGCGCTGAGCGGTATCGGTGGCGCGGACCGACTGGCGGCCGGC
AACCTCAAGCACCAGCTGCTGAAAGTCCTGGCCCCTGTCGTCCGACAACTGCGGCAACCG
CCCGACCAACCCGAAGACTACAAGCGCGACTTCGGGTACCTGGGTCCTAGTCTCCAACAA
GCCGTCAGCAAGATACGCTCGTCTCCCTCGTGCAGTACCGCAGGAGGCGCCGTGGCGGTA
GTCACCTGCACGCCGCCCCTATTGCCTACCGCGCCCTCGCCTTCGCCTTCCAATATATCG
CATACTACAAAGACTGAAACAGTGACCACTCGTAACCTGGTGATAGCGTCATCGACGCCA
CAATCACCGGCCCCGTCTACACCGCCGCCACAGAAATTTGTCATTGTCGCATCTCAGCAA
AAACCTACACAGATTCAATCTTCGAGCGGTACGGGGCACATCGTAGTACACAGTTCGCAG
CCAACCATAGTGAGGAGTCAAAACGTTCAGTCGGTGGTGGTGACGAGCGGACCGGCGCCG
GGCGGCGCAGCGCAGAAGTTGATGGTCGTCGGAGTGCAGCCGCAGCACAACCAAGGACAG
GCGCCAGTGTCGGTGGTGGCGAAGCCCGTGTTCGCTCGTGGGGGCGGCGGACCACAACCT
CCGCCTGAACTAGACGACCTCTCTCATCTCGCCTGACAGCCACAGAAGCTCAACTTCACC
TATATCAAACAATCTAAGAAGAATTAATTATGAGAAAATACTTATTGCCAATCGTTTGTT
AAAAAATGACAATATGTTGATTATGGTGGTACGTTAAACAAATAAATTTGATGATTT
(2337 bp)

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