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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13348_c0_seq1
Scaffold_idBomo_Chr11
NCBI non-redundant
(nr)		PREDICTED:_probable_ATP-dependent_RNA_helicase_DDX20_[Plutella_xylostella]
Ontology
GO:0000166 F nucleotide binding
GO:0000387 P spliceosomal snRNP assembly
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0010501 P RNA secondary structure unwinding
GO:0016787 F hydrolase activity
GO:0032797 C SMN complex
GO:0034719 C SMN-Sm protein complex
Transcript
Level		FPKM:7.52 TPM:7.56
ORF EntryO_BomoSK13745_5prime_partial:A_BomoSK_comp13348_c0_seq1
Sequence
(Nucleotide)
ATTAATTGGTATTTTATTTTTATTGTTATATTAGTACATCCTTGAAAGCTCATCAATGTA
TACGGAAAATTCAATGTGCCTCATGTAATTTTTTAATGTATTATACCAAACAGTGTAGCC
ATATTCAACTTTCGTGTTAATAGTTTCTTCTAGATCACAGACGGATTTCGTTTTTAAAGA
ATGGTTAGATGATTTCTTATTTCTAATATCATTCTTATTCAGAATTTTTGTTTCATTTTG
CATCATATCTTGAACTACTGCTTTAATTTCTTCATTTTTATCTGATAAATTTCCTGTTGT
ATTTTTGGTTAAAGATGAATCTTTGTCATGATCACAGACCCTATATTTATGTTTGTATTG
TTTTGCACCAGATCTTTTTAGTTTTGTTTTACCAAAACATATAGGAAGCCCTGATTCAAG
CATGGCTTTGTTTATTAAATTTTGATTGTTTTCCTCTTTGAAGAATTTATCTTTTGTTTT
AAGGATTTCTATAATTTCTTCTTTCTGCGCGCCATTATGTTGAATAATTTCATTGTCTTT
ATCTATTTGTCCTTTAATTTGTTTGTCTATGACACCATTAGTAGATGTAGAAGGTATGTT
GAATAATTCAAGATCATTTTCAACTTTCAAAGGCAATTCATTCATAAAGCTATAGGGAAC
TTCTTGAATGGTTTCTTTTTCTTCTTGAAATGAATTAACTAAGTTGGTAAATGATTCTAT
CCCATATTTATTTGATTTATCAACTGGGTCATTATTATTTTTTAAATAACACGCTTGTAG
TTGTAAATCTTTTTCAGTCAGTAATCCCCACAACTCCCCGTGTCTTTCATTTTTCTCTGT
TTTCAAATGTGATTCTAATTTTTCACAATTTTCCATCGAATTATTTTCTCGATTTTCTGT
ATTAAAAATTTCGTCTGTCCATAAATTAGTAAGATTGAATGTAGGAGTTAATAAAGTTAA
CATGTTCTTAAAGTTTTGACTTTCTTTACCTTCACTAATTATTGTGACTGCAATCCCATA
AGAGCCAAATCTGCCTGCTCTTCCAATCCTATGCAAATATGTTTGCCATTCAAAAGGAGG
CTCAAAGTTTATGACTAGATCAATATTAGATCCATCTATACCTCTGGCAGCCAAGTCTGT
TGATATTAATATCCTGCATTTGTATTCTTGTAATGTTTTCAATGCATTTAACCTATCTAG
TTGTTCTTGTTGACCATGTAATAAACTCACTGGCCATTTAGATTTTTTTAATAATCTATG
AAGTTCTGTAACTCTTGCTTGATAATTGCAAAATATTAAACACTGTTTGAACTGCATTTT
GGATAAAATTAAAATCAATTGTTCAAATCTGTTCTGAGTTTGTTTTACTATGTTGCTATT
GTACTTCACTATAGTTACTTTCTGTGTAATGCCTAATAAGATATTGTTACTATCTGGACA
AATGTGTTGAGCATTTTTTACAAATTTACAAATGATTTCCTTGCAATGTTCTGGATAAGT
GGCACTACTCATAATAACTTGTTTATGATTAGGTAAAGCTGAAAATATATAGTTTATATC
ATTCAGAAAAGGCTTTTCTACCAGTTTATCACATTCATCTAACACAAAGAGTTGAACATC
AGATAAATTAATATGATTTCCTACAATAAGATGTTTTAGACGACCTGGACTGCCAACAAC
AATGTGTACTTTTTTCTTAAACTTAGCTATGTCTTCATTTACAGATAATCCTCCCATTAC
AACTTCGACATTCAGACCCTTGTGGTGTGATCCTATTTGTTTAATAACATCACATATCTG
TGCTGCTATTTCTCGTGTAGGTGTCAAGATCATTACTTGCAAACCATTATTAAGATTTAG
TTTTTCTAATGCTATTATAGAAAACACAACAGTTTTTCCAGTTCCAGACTTTGCTTCTAG
TAACAAATCGAAACCACATTTGCC
(1944 bp)

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