SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13338_c0_seq1
Scaffold_idBomo_Chr9
NCBI non-redundant
(nr)		BRISC_and_BRCA1-A_complex_member_1_[Operophtera_brumata]
Ontology
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006302 P double-strand break repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0010212 P response to ionizing radiation
GO:0016568 P chromatin organization
GO:0031572 P mitotic G2 DNA damage checkpoint signaling
GO:0045739 P positive regulation of DNA repair
GO:0051301 P cell division
GO:0070531 C BRCA1-A complex
GO:0070536 P protein K63-linked deubiquitination
GO:0070552 C BRISC complex
Transcript
Level		FPKM:8.47 TPM:8.52
ORF EntryO_BomoSK13716_complete:A_BomoSK_comp13338_c0_seq1
Sequence
(Nucleotide)
GCGGACAAGTGGCTTATCTATGATAATAAAAACCTGCTCTTATTTGGACATTTAATGTAA
ATTTCTAACAAAAAATCTTCAAATAGATATGTATAGAATTTTTCAATAATTCGAACATAA
AACTTAGTACCTATTGGGTTTAAACCGGAACTACAGCTTTGAGTGGTTACGCCAATAAAT
ATTATAATACATACATTTCAAATAATGGAAAGTCCTGAGACAGTATCTTCTAGTAACTCA
CATGGAGCATCAGACAGTGATTCAAGACAATATGAAGATACGTCTGTCCTCGAGAATGAA
GATGTTAAGGAAATACAAGAACAAGTTCTTGCAAATCTAGAGAAGCCTAATCTGCCAAAT
GTAAATGTACCAGAGAAAATAATTGTCTGCTTAGATGTTTGCTATGACAATCCAAATTCT
CTATACCGTTTTGGTGATGGCACAACATTTTCTCCAATCAATATGTTGAAACGAATACTT
GATTTCTTTTTTCATACAAAACATGCAATCAGCAAGAAAACTGAATTTGCATTGATAACA
CTTCAAGATGCAGGTGCATGTTGGACCCAGAATTTTACAAGCAATGTTAAAGATTTAATC
AGTGCTATTGATTATGCACATGCTGAAGAAGCTACATCAGACACTTTTGATTTTGAAAAA
GTATATGAACTAATAAGACATCATATAGAAATTCCTATGATGAAACCTGGAGAATCCTTA
CTGCCTCCTCCTTATATCGTCAGACTTCTGATTTTATATGGAAGATCTAATTGTGTTCCA
GTAATTCCTCATGAAGACCCATGTTTCCAATATATAAGAAGTCAGATATATTTTTATACA
GATATTCTGTTGGCACATGAAGATGATTGTGCTACGCATAAATGTGATGAAATATATGAT
GCATTACAGGATCTTGATAATGGCTATTCTTATGTGTTTGAGGTATCAAGAAATGCTACT
AAAATACATGATTGTATTGCAAAATTGTTAGCACATCCACTACAGAGGCCCTTGCAAAAA
AATACAGACTATTCTTTCGGTTCAAGATACTAGTATGTAAAATGTTAAAAACTATCCTCT
TAAGTGTCTATTTGAAAAGGGTTATGAAAGTAAATGAAAATTTGTAAGGCTATTAATAAA
TATTTATTTTGATTTGTTAGACATTCTCTTTCTCTCATATTAAAAGATGATATTCCATAG
GACTTTCAGATTTTAAATATACATACTTCATTTTAGAGTTGTCATTCTTCTCACTGCTCA
ATGCTTAGTCATGTTTTTTATAAACTGAAATGAAATTTAAAATACTGCTAGATGACTTAA
AATGTAACTATACATTCGCACAGCCATCTTTACCTTACCAATAGATATTTTTTTATCGTG
TGTATACTATAAAGTTGAATATGCCACTACTGTGCTTTTAGATTATAAAGTTGTTAGTAT
TCAAAATGCAAGACATTTTAGATACAATTTTTGAGCAAAGTAAATTCTATAATGAGTAAA
TTCTTTTTTTTAATTTACAATTTTGGGGCACAATGTGTCTTACAATATGTCTATGTAATG
TAAAAGAAATGCAGACTTAAATTATAAGCACAGAGAAAATGCTTTTATTAAAAAAGTAAT
ATACTAACCACATTTTAAGAGTAAATAATACAAAGATAAACATAACATTTAAATAACTCG
TAAAAATATTTATCTATTTACAATGATTAGTAACTGAAAGCAAAGTAGCCCTTTGGATTT
ATGTTCTATGATAAGTAATTCAAATTTATGTTATAATGGCCATTAAATGTAAATGTTAAA
TATCAATATTCTCAGTATCAATAAAAAGTTTTGTTTAAACATTTCCATAGGTACTATATT
ATTTGTTATTTGTCCAGACCTTTTCAGAAGTAAAAATGACACTCATCACCATAGATACTT
TTGATAACATTTCATATAAAAATAAATAGCGAATTAATTCTATACTTTTCCTTTAATCAT
CAAAGCCCTTACGTAGTTTGCGTAATCAGTCAATCGTTATGATGATCTTCCACTCCAACA
TAAATATATAAATAAGCAAAAGTAGCTAAAAAAACATGAACACAAGCAAACCTCTCAAAT
ACAATCGCTATTGATAAGTAACAAATATTTCTCAGAACCAGTCACATTATCTCATTCTAC
ATGATAAAAAGTACTATAAATCACATTTGAGATCCTATGGATGTAACTATCGATGCCTAT
AATTTGACACTGGTTAATTTACGAACGAAATAAATAACTTCATGTTTCAGTCTCAACACT
TTAAAAACTCTATTTACAAAAATGTAATAAAAATTTAGCTGTTGTCAAATAAAAATACCG
ATTTCAATATCACGGGTTACATTAAGCTAATGAGTCAACAGCTAAATCTGGCCACTTCTC
TCACCATCAAGTACAATGAATAGTGATATAAATTATATGGAATGATAAATGATTTTCTTT
TATAGCATCTTATCTAGCCAATTGTTTTGTGATTTCAAAAACATAATACTTAAAGCCTTT
TAGTTGTTCAGCTCGACGAGCCGACGTAATAACCCACAAAATTGGCGAGTTCAGTTTAAC
TGGCATACTTGTCGTCGCCACGCGAAACTAATAAAACTATATATACCAACCACTACTTCA
CTATAATACAATGCTGATAAAAAGTTACAATTTACTTGTTTTTACTGTAGGCAATGAAGT
TTTCACTGAAGTTCTCGTAATCGATTCCAACACACATACTCGTAGAGGACGAAACATAAC
GGCAATGCAGACAAATATTCAACATGTAGATAAATCGCAAGGAAGACAGGACTAGATGAT
TCGTTATTATAATTTATAAACCACTTTAAATATGAAACGTCCTTTATCGTTATTACTTCG
CTCCGTTATTAGTCGCCTTCAGCCACCCAGAAAGTTTATACTTTGATATTATTATTTTTA
CACGCTAAGACCCACGCGTATTCGTAGTTCACTTTATTTAACATTATTATATTTTAGAAT
TCTGCTCGTGATTTCGTTACAATATGGATCTGCAAGGACTTAACAGTCAGAAACAGTTCA
TTTTGTATAGACATATGTTTTCCGATTTAAGGTTTTGAATACATATTTAACTACGACTGT
ATTTGACACTGGCACATCTTTAATATCACATATACTATGTCACCATCAGACGTAAGTCAA
CAGCGCAACAATCAACACTTGTAGGTGGGTAAACCGCTCACAGGGTACCAGACACAGTGA
AGTTATATGGGTCGCTTAGGGTGAAAGTATATAGCGCAAGATAGGCAATTGAAACTAATA
CGCTTCCCTAGGTCGCGTTAGATCTTGGAATCAGCGGTGGGCGGACAGAGTGGGCGGCTA
GAGCGTGGCCGCGCAGGGTCAGAGCAGACAGGCGGCGAGCACGTGCATGG
(3410 bp)

- SilkBase 1999-2023 -