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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13336_c0_seq1
Scaffold_idBomo_Chr8
NCBI non-redundant
(nr)		PREDICTED:_loquacious_isoform_X5_[Bombyx_mori]
Ontology
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0005737 C cytoplasm
GO:0006417 P regulation of translation
GO:0016442 C RISC complex
GO:0030422 P production of siRNA involved in RNA interference
GO:0030423 P targeting of mRNA for destruction involved in RNA interference
GO:0031047 P gene silencing by RNA
GO:0031054 P pre-miRNA processing
GO:0035197 F siRNA binding
GO:0035198 F miRNA binding
GO:0035280 P miRNA loading onto RISC involved in gene silencing by miRNA
GO:0042803 F protein homodimerization activity
GO:0046782 P regulation of viral transcription
Transcript
Level		FPKM:19.12 TPM:19.23
ORF EntryO_BomoSK13701_complete:A_BomoSK_comp13336_c0_seq1
Sequence
(Nucleotide)
GGCAACACCAAAAATTTATTGAAGTTACAGCAGAAATAATATGAAGTTCATAATGTTTTA
AAATAATATAGACTTCATACATATTATTAGCAGGTGTGACAAATGTTAAAAAGCCATGAT
ATTATTATATTTAGAGCTTAATTATAATTAATAACAATAAGTAAAACCAAGACTCACTAA
AGAAAAAATAAAATAAACGTGGAACAATCATAGTCCTTACGGCCGGACAAAATATTAGTT
TTTATTTAGTTGGGTCTTGGTTGAACAGAACTCCAATCCTTTACTCGAGTAGTCTTTTCT
AACTTGAACAGTGCGATGTTTTATAAGGGCAGGTTGAACTCACACCATTCAATTTAAAAG
AAACTTGGTGCGTGCAGGTTCCTCGTCGGTGCCGGGATCACAAACATCGACGACGACACT
GTACAGGTACAAATTGTTACAACCTCTATACTTTGCATTAAAATAATGCCCATTTTCACA
GGCAAGGGATCCTCTCTTTACAAACTCTTTACAGTGAGTGATGCATCTCACTCATACATT
TAGTATTCTACTTCCCTGCAAAGTTTTCCATCATGTACACAAAAGAAAACTCACAATCAC
TGGTATCAAACAAAACGAACAACGACCTGTAATCCTTCAATACCATCAATGTTCCAACCC
TTGCACTTTGTAAAAAGTTCTTAAAGTTCAAGTGAATTAATTGCTACGTCGGAGCTTATT
ACAAAGCAAAGGTCGGGCAGTTCGTCAACAAGACACTAGCTGAAACTATTTTCCGTTTAA
TGCTCAGCATATTAAAAAGGCTTACCAATGATAGTTAAAATTCATAGTTCCTAAACATGA
ATTTACGAAATAAGTCAAACATACTGACTTCGCCGCAATAATAGTGTTAATTTATAGATA
AAATAGATTAAAAGCTAAGATTGAGATTATACTTTAATAATTAAATATGAATGCAAAAAA
CATGCCTAAGATGCTGAATATTAAACTGGAAATATATGTAAATCCACACTTTTTTTTGTA
TTTTCATATTATTTCATTTTTTTTACATTTTTATAACACGTAATTTCCACGCTGGGAAAA
TTACACTAATTCTATGCAAAGTATAGCTTGTATTTTATGACAAATCACTCCATACTTTGT
TTTTTAAGATTACGGGCTATGCAATTTATCCTCGCACATTGGCAGTAGTTTTATTAATAA
ATAATGAACTTTTACTTGCAAATTATTAAAGGATTTAATTTCATCACAATGCTAGTTGCC
AGAGTGACACTTTTTTTACGGCCGTTTCGCTTAAAATCGCTTAAATGTTTATTGCTCTTG
GTGGAAATAAATGTCTAGGGAATACATAATAAATTGACTGCTAAGAACGGTTTTTAAACT
TCGGTTGATAAACCTCATATCGCAGCACTTTGTTAACACTTCAGTGAGGAGTTAATTATA
GAATTGAATAGCTATCGCGAAAATTATCTCTTGAAACGGGGGAACAATAACAGAGTTGAA
AATAGTATCTCAGTGAAGTATATAGGCTCCAGTAACTCCTTAACACAAGATTGGCCGTGA
GCTCGTTCACTTATCTTAGCTATAAGTTTCAAACTGCCTACCATAAATTAACCAAAAAAA
AAAAAAACAAGTTGGTTACTGCAAACATGCCAGTTATAAAGCATAGCCCAAAGTACTATT
GGTACATAGATGCGTACTATTAATGCCATTATTCATATGGAAAGTGATGCAACAATATGA
AGGCTCAAAACCTAACGACATCAATACAAAACACATAGTGATATGGCCTGCATTAAAATT
AAATCTCATAACGTTAGAGCCCATAGATCAAATGCATAGGTCGTCGCACTGGTCTTTGCT
GATGTCGTAAGATGTTGAAAATTTCACTTTTTGGTCATAATCTTGAGATACTCCAAGGCG
TTCTGAGCAGCAGATGACTGGGCATCCTTGCTGGTGAGGCCGGCTCCGTGGCATACAGCT
ACTGGCAATGTGGAAAGCTGGACAAGACACTGACATAGACCAGTCATAGACTTTTCTTCT
ATGTCGACATAGGTCACCTCAAAAGATTGCTCTGATGCTATTTCTTGCAAGAACTGAACG
AAGTTAAAATCCTTATTGTTTAGTGGTGTCACCTGCAACTTGGCCAGGTTGGGGCCAACA
GACTGTTTGAGATGTTTGTGGAACTGCGACACTTTATGGCTATGGCTCGTGGTCAATGTG
GAGATTTTACTATCTTTCAAATCGGCATAACGGGCCGCAACACCGCCCTCATCATCATTC
TGGAAGGATTCTGGTGGGTTGTCCTGTAAGGCCTGCCACATCTTGTAGGCAGCTTGCCGT
TTAGCTAATTTCTTTGACTTGCCTGTACCAACTTCACGGCGCTTGAGCAATGTGCAAATG
ATCGTAAATTGACGTTCATGGGGCAAACGTCTATTAACATTGTCATCGTTTTCAGCATGG
TAAGATGGTGGTGGCCAGAATCGTGACATACACAACTCCTGAAGCCATCCAACAGGATTA
CCCATTAGTTTATCTTCAAATGTAGGTACTACAGCACCAGTTTCAGGAACATTGCCATTG
GTAGTCTGATCAGCTGGTGTAGCACCAGTTAACTTGTCCAGTAAAGCCTTGGCTGCAGAG
TGCTTTGCCTCTTTTTTTGAGCGACCAGTGCCCATTGCAACTAAATCAGCCACAGTTACT
CTGTACCGGAAAGTGGGTTCATGTATCATGCCTTCTATCTGGACTAGTTCATATTTAGGA
ACAGTTCCACGACGTGCCAACAGCTCTTGCAAAACAGAGACAGGAGTCTTTGTAGGAAGT
GATTCCATTTCCCTCTTGGCCGCCTCGTCCAAAGGCAATCTTTGCAAGTTATTAGGTTTG
GGTCGGGTCTGATAGCGGCGTCTTGGACCGTGAGGAATGTGTTCACCGTTCGGTCCACTG
CCGTGCACTGTCATTCCATGGATAACACCGGGTGGTAAACCCGGTACCACAGATGGATGC
GGGTGGACCGTATTCCCTTCCATTTTTCCCACAGCCGTAGTTACAAATGTATTTATCGAA
ATTTGCTATTGAAAATGAAACGGATACAATACGAAAAATAAAAGAGAACAGAATTAGATC
TTCAGTTTCGTAAAACAACCTATGTAACCTGCACATTAAATTTATGTGAAATGAGTGAAT
GAAAATGAACGAGTGAACTAAGAAT
(3205 bp)

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