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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13319_c0_seq6
Scaffold_idBomo_Chr21
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_RNA-binding_protein_NOB1_[Bombyx_mori]
Ontology
GO:0000469 P cleavage involved in rRNA processing
GO:0004521 F endoribonuclease activity
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0007601 P visual perception
GO:0030490 P maturation of SSU-rRNA
GO:0030688 C preribosome, small subunit precursor
GO:0042274 P ribosomal small subunit biogenesis
GO:0046872 F metal ion binding
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
Transcript
Level		FPKM:6.34 TPM:6.38
ORF EntryO_BomoSK13613_complete:A_BomoSK_comp13319_c0_seq6
Sequence
(Nucleotide)
GTCAAGTTCCAACCCCGGGACCTGGGGATTGTTTATTTTTCAGTTTCAAGACCTAGATGC
ATATAAATTCAGCTTTCATGAATGTAATTCGCGCAGTACGCACGTCGATATCAAAAGTAC
GACTGCGACCTCACAGAAAGTCGATTGCATCTAGTGCTAATAAAGTGCATTACAAAATGG
AGGGAACGAAAACTATGAAGGAACTGGGATACATATTTGATTCAAATGGTCAAGTAAGAA
AAATTGGAGCTGATGGACAGCCAACAGATGAACCATTCCAATTTGTTGTGAGCAATGATC
ACCAGGAATGCCAAGCTCATTATGAAGAACTTGGCTCAGCAATCACCAATTATGTTTATG
ATATTCTTCAGACTCAGATTGGATTGCAAAAGTTACCAATCCCAAAGGATTCAAATGATG
GAACATTTATTTTTGTTTCAAAAGATTATGATAAAAAAGATGTTCTGTTAATATTGATTC
ACGGATCAGGCGTTGTGCGAGCTGGTCAGTGGGCTAGATCCCTCATAATCAATGAATCGT
TGGACAAAGGATCTCAGATTCCGTATATCAAGAAGGCTTTGGCCAAAGACTATGGAGTAG
TGGTACTAAATACAAATGACAATCACACAGCAGATGGAAAGACCATTCTCAACAGTAGCA
CCGCTGAGGAACATGCCCTTTACGCATGGCTGAACTACATATCCAATGCGAATGCAAGTT
CCATACTCATTGTAGCACATAGTTATGGTGGGGTTGTCACGGTTTCTCTGGCAGAAGAGG
TGCAAAATGACTTTGAAGACAGAGTAAAGGCCATTGCTTTTACTGACTCTGTACATTCCT
ATTCTAATAAGAAGCTTACAAACTTTTTGAAACAGGTTACAAAGAATTGGATATCTAGTC
AGACACCGCTGGATACACCTCTCAGAACTCCTGATTTCGATATAACCAGACTTTCAGCAG
GTCATGAGAAACATGAAATGACATCATACATGTGTATGGATTCTGTTTTTAAATACTTTG
ATGAAATACTAAATATGGATTAAAACGAATATTCACGTGGTACTACTCTGTTATAATAGC
GAATTTTTATTCTCTGGTTATGTTTAAGAATGAGCATTTATTAATGTTAAATTTATGTCT
ATGTACCTAGTTAGTTAATAAATAAGAATGTGTTTGTTTCAATTTATTTCTTCTTTCCTT
TAGAATAATGCTTCATCCAATATTTTATGTCCTGATTGTTGGCACGCACCCCCAAGACAG
CCGATTTGGAATTCACATCTTTCATTGCGAATGGAGAAAATCCTGCAGTATAATCAGGAT
CTAGAGCATTTGTTTTGTTTCTTGCTAATTTGGTAACAAATCTTTTGTGTATATGCTGGT
CTTCAGTTAAAATTGGGTATTGAAAATGTTGACCACCTTTTGGTGTAGGTAAACTAAATC
TTTTTCCTCTTGCTGTTAAAGGTTTACGTCCATTTATATGTATTCTTTGATTACCATCTT
CATCAATACTCACTGCAACTTTTTTTAAAGTTGCATGACCACATTTAGGACAGAACAGTT
TTGTCATTACACTAGTTGTTTTGAAACAGGTTGTGCAACGAAAAATAAATGTACGTAATT
GTCTTATAATTCTTCCATCTATTGATGTAACATTTAGTCCTATCTGCTTTAAAACATTTT
GCATTGCAAAGTCCGAAGTGATGCAGGCAACTTCAACATCTTTTTCTTTGAATTCACCAA
GTTCCATCTCTTTTCGTTTTTCAGCCAAATTTTTGGTTGTGATCCATTCTCCACCATCGC
TATCTGTCTCGTCTTCATCATCATCATCATCATAGCTGTCTGTAGCCTCTTCATCAGAGA
CTTTAACCATTAGCTCATCAACTTTGTCATCTTTCAAATCCATATCATTGATTTGTTTTG
AAATTTCTTCAGCCAGTTTATCATCATCAGTTTCATTTGTTGTTGTTTGACAGTTTTGTT
GGTGTTTGACTTCAAATGACTCTCCAGTTTCAACATTCACAGTCTCTCCTATGGGTTGTT
GTAAAGGTTCACTGGTCTCTTTGTTATTGTTTGCATTAGAGTCTTTCTCACCTGTTTCCT
GATTGGCATTTTCATAATTGGGATGAAGGTTAAACCCAGCCAATCCTGTAACTTTAACAG
ATTTTTGCATAGTCGGTTCATCTTTGAGATGTTCCGTACCGCCAACCTTCTCCTTCTCTA
GCTGGTAGGTCAGTGCCATAACCTTAATATCTGTAGCAGAGAGGCTAGAATAATCACCTG
TTTTCTTCGAGAATTCAGTAATGAATTTTATGTTATCTGCGAAGACATCCTTGACTTTTA
AGTCGTATGGAAGGACAACGAGCTTTTTTCTTTGCCTATCATTAGTTATTTCATCAATAA
CCTCTTGTATAGTATAAACATTTTCAGCAATGTCTTGAAGGTTTGCCGCCCTTATGAATG
CAGAGGTATCCACAATCAGATGCTTGATAGACTTCGGCATTGCGCTGAACACTAATCACG
ATATTAACTTTACATGTGTATAATTCGTTATGCAAAACGAACTTGTTTAGCTCACGTGTG
(2580 bp)

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