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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13319_c0_seq5
Scaffold_idBomo_Chr21
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_RNA-binding_protein_NOB1_[Bombyx_mori]
Ontology
GO:0000469 P cleavage involved in rRNA processing
GO:0004521 F endoribonuclease activity
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0007601 P visual perception
GO:0030490 P maturation of SSU-rRNA
GO:0030688 C preribosome, small subunit precursor
GO:0042274 P ribosomal small subunit biogenesis
GO:0046872 F metal ion binding
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
Transcript
Level		FPKM:2.20 TPM:2.22
ORF EntryO_BomoSK13611_complete:A_BomoSK_comp13319_c0_seq5
Sequence
(Nucleotide)
GTCAAGTTCCAACCCCGGGACCTGGGGATTGTTTATTTTTCAGTTTCAAGACCTAGATGC
ATATAAATTCAGCTGTAATAAAACATATATCAATGTGTTTCCCTGAGGTGATCAATACTG
CAGGATGCGTACTTACCACCCTCTCTGTTGCAGTTCATGAATGTAATTCGCGCAGTACGC
ACGTCGATATCAAAAGTACGACTGCGACCTCACAGAAAGTCGATTGCATCTAGTGCTAAT
AAAGTGCATTACAAAATGGAGGGAACGAAAACTATGAAGGAACTGGGATACATATTTGAT
TCAAATGGTCAAGTAAGAAAAATTGGAGCTGATGGACAGCCAACAGATGAACCATTCCAA
TTTGTTGTGAGCAATGATCACCAGGAATGCCAAGCTCATTATGAAGAACTTGGCTCAGCA
ATCACCAATTATGTTTATGATATTCTTCAGACTCAGATTGGATTGCAAAAGTTACCAATC
CCAAAGGATTCAAATGATGGAACATTTATTTTTGTTTCAAAAGATTATGATAAAAAAGAT
GTTCTGTTAATATTGATTCACGGATCAGGCGTTGTGCGAGCTGGTCAGTGGGCTAGATCC
CTCATAATCAATGAATCGTTGGACAAAGGATCTCAGATTCCGTATATCAAGAAGGCTTTG
GCCAAAGACTATGGAGTAGTGGTACTAAATACAAATGACAATCACACAGCAGATGGAAAG
ACCATTCTCAACAGTAGCACCGCTGAGGAACATGCCCTTTACGCATGGCTGAACTACATA
TCCAATGCGAATGCAAGTTCCATACTCATTGTAGCACATAGTTATGGTGGGGTTGTCACG
GTTTCTCTGGCAGAAGAGGTGCAAAATGACTTTGAAGACAGAGTAAAGGCCATTGCTTTT
ACTGACTCTGTACATTCCTATTCTAATAAGAAGCTTACAAACTTTTTGAAACAGGTTACA
AAGAATTGGATATCTAGTCAGACACCGCTGGATACACCTCTCAGAACTCCTGATTTCGAT
ATAACCAGACTTTCAGCAGGTCATGAGAAACATGAAATGACATCATACATGTGTATGGAT
TCTGTTTTTAAATACTTTGATGAAATACTAAATATGGATTAAAACGAATATTCACGTGGT
ACTACTCTGTTATAATAGCGAATTTTTATTCTCTGGTTATGTTTAAGAATGAGCATTTAT
TAATGTTAAATTTATGTCTATGTACCTAGTTAGTTAATAAATAAGAATGTGTTTGTTTCA
ATTTATTTCTTCTTTCCTTTAGAATAATGCTTCATCCAATATTTTATGTCCTGATTGTTG
GCACGCACCCCCAAGACAGCCGATTTGGAATTCACATCTTTCATTGCGAATGGAGAAAAT
CCTGCAGTATAATCAGGATCTAGAGCATTTGTTTTGTTTCTTGCTAATTTGGTAACAAAT
CTTTTGTGTATATGCTGGTCTTCAGTTAAAATTGGGTATTGAAAATGTTGACCACCTTTT
GGTGTAGGTAAACTAAATCTTTTTCCTCTTGCTGTTAAAGGTTTACGTCCATTTATATGT
ATTCTTTGATTACCATCTTCATCAATACTCACTGCAACTTTTTTTAAAGTTGCATGACCA
CATTTAGGACAGAACAGTTTTGTCATTACACTAGTTGTTTTGAAACAGGTTGTGCAACGA
AAAATAAATGTACGTAATTGTCTTATAATTCTTCCATCTATTGATGTAACATTTAGTCCT
ATCTGCTTTAAAACATTTTGCATTGCAAAGTCCGAAGTGATGCAGGCAACTTCAACATCT
TTTTCTTTGAATTCACCAAGTTCCATCTCTTTTCGTTTTTCAGCCAAATTTTTGGTTGTG
ATCCATTCTCCACCATCGCTATCTGTCTCGTCTTCATCATCATCATCATCATAGCTGTCT
GTAGCCTCTTCATCAGAGACTTTAACCATTAGCTCATCAACTTTGTCATCTTTCAAATCC
ATATCATTGATTTGTTTTGAAATTTCTTCAGCCAGTTTATCATCATCAGTTTCATTTGTT
GTTGTTTGACAGTTTTGTTGGTGTTTGACTTCAAATGACTCTCCAGTTTCAACATTCACA
GTCTCTCCTATGGGTTGTTGTAAAGGTTCACTGGTCTCTTTGTTATTGTTTGCATTAGAG
TCTTTCTCACCTGTTTCCTGATTGGCATTTTCATAATTGGGATGAAGGTTAAACCCAGCC
AATCCTGTAACTTTAACAGATTTTTGCATAGTCGGTTCATCTTTGAGATGTTCCGTACCG
CCAACCTTCTCCTTCTCTAGCTGGTAGGTCAGTGCCATAACCTTAATATCTGTAGCAGAG
AGGCTAGAATAATCACCTGTTTTCTTCGAGAATTCAGTAATGAATTTTATGTTATCTGCG
AAGACATCCTTGACTTTTAAGTCGTATGGAAGGACAACGAGCTTTTTTCTTTGCCTATCA
TTAGTTATTTCATCAATAACCTCTTGTATAGTATAAACATTTTCAGCAATGTCTTGAAGG
TTTGCCGCCCTTATGAATGCAGAGGTATCCACAATCAGATGCTTGATAGACTTCGGCATT
GCGCTGAACACTAATCACGATATTAACTTTACATGTGTATAATTCGTTATGCAAAACGAA
CTTGTTTAGCTCACGTGTG
(2659 bp)

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