SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13319_c0_seq4
Scaffold_idBomo_Chr21
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_RNA-binding_protein_NOB1_[Bombyx_mori]
Ontology
GO:0000469 P cleavage involved in rRNA processing
GO:0004521 F endoribonuclease activity
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0007601 P visual perception
GO:0030490 P maturation of SSU-rRNA
GO:0030688 C preribosome, small subunit precursor
GO:0042274 P ribosomal small subunit biogenesis
GO:0046872 F metal ion binding
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
Transcript
Level		FPKM:0.00 TPM:0.00
ORF EntryO_BomoSK13609_complete:A_BomoSK_comp13319_c0_seq4
Sequence
(Nucleotide)
CTGGTCAGTGGGCTAGATCGTTAGTATCATGACTTAATTACTAAATTTTGGTTTCAAGTA
TGTTTAAAATTAAAAATAAATAATATTGATGATGAGATAAAATTCAAAATGCAAATGTTA
TTTTGAATTTAGACAAGCAAAGCCATTTTTGAGTAGTACTTTAATAACTTTGGATATATA
ACATGAAACTTCTTCTTAGTACTGAATCATAAAATTAATATAGAAATATGTATATAATGG
TGGCTCAATTCCTGATTCTGTTCATTATCCTTGGTTGGTACAATGATGGTATTACCCTTC
TGTTCTTCTTTCACAATGGCAATACTCTATTCATCTATGTATTAATATGTACGTAATCAA
TGCATATTTTTTGTTTTCCCCATGTCTTGTTTTAAAGTAGGTCACGTAATTAGGCCTGCA
GTATATTTGTTCTGAAATGTAATTTTTGTCACAGCCTCATAATCAATGAATCGTTGGACA
AAGGATCTCAGATTCCGTATATCAAGAAGGCTTTGGCCAAAGACTATGGAGTAGTGGTAC
TAAATACAAATGACAATCACACAGCAGATGGAAAGACCATTCTCAACAGTAGCACCGCTG
AGGAACATGCCCTTTACGCATGGCTGAACTACATATCCAATGCGAATGCAAGTTCCATAC
TCATTGTAGCACATAGTTATGGTGGGGTTGTCACGGTTTCTCTGGCAGAAGAGGTGCAAA
ATGACTTTGAAGACAGAGTAAAGGCCATTGCTTTTACTGACTCTGTACATTCCTATTCTA
ATAAGAAGCTTACAAACTTTTTGAAACAGGTAAGAATGTAACTGGAGGCATGCACAGTTG
AAATTTAACTTTTCCTAATTGGTTTCTCGATATTACAGGTTACAAAGAATTGGATATCTA
GTCAGACACCGCTGGATACACCTCTCAGAACTCCTGATTTCGATATAACCAGACTTTCAG
CAGGTATAAATATTGCATTCATAAAATCAAATTATTTGTGTTTTTAAGGGGAATAGACTA
TGGCTATTCTTTCTTCTATGAACTTATTTTCTAGATTATAATTACATACTTATCCAAATC
TTTGCACTGCCTTTGTCCATGAGTAACACTGAGCATTAATCACTGGTTCAGCTAAAAGCT
TACTATTAAGTGCTGCAATAGTAACATTGAAGCAACCATTGGTAAAGGTTGACTTAAACC
ACTGAAACTCTGCATTTGTGTTGTGTCAAATATATAAGAAAACTTTGTTTGCAGGTCATG
AGAAACATGAAATGACATCATACATGTGTATGGATTCTGTTTTTAAATACTTTGATGAAA
TACTAAATATGGATTAAAACGAATATTCACGTGGTACTACTCTGTTATAATAGCGAATTT
TTATTCTCTGGTTATGTTTAAGAATGAGCATTTATTAATGTTAAATTTATGTCTATGTAC
CTAGTTAGTTAATAAATAAGAATGTGTTTGTTTCAATTTATTTCTTCTTTCCTTTAGAAT
AATGCTTCATCCAATATTTTATGTCCTGATTGTTGGCACGCACCCCCAAGACAGCCGATT
TGGAATTCACATCTTTCATTGCGAATGGAGAAAATCCTGCAGTATAATCAGGATCTAGAG
CATTTGTTTTGTTTCTTGCTAATTTGGTAACAAATCTTTTGTGTATATGCTGGTCTTCAG
TTAAAATTGGGTATTGAAAATGTTGACCACCTTTTGGTGTAGGTAAACTAAATCTTTTTC
CTCTTGCTGTTAAAGGTTTACGTCCATTTATATGTATTCTTTGATTACCATCTTCATCAA
TACTCACTGCAACTTTTTTTAAAGTTGCATGACCACATTTAGGACAGAACAGTTTTGTCA
TTACACTAGTTGTTTTGAAACAGGTTGTGCAACGAAAAATAAATGTACGTAATTGTCTTA
TAATTCTTCCATCTATTGATGTAACATTTAGTCCTATCTGCTTTAAAACATTTTGCATTG
CAAAGTCCGAAGTGATGCAGGCAACTTCAACATCTTTTTCTTTGAATTCACCAAGTTCCA
TCTCTTTTCGTTTTTCAGCCAAATTTTTGGTTGTGATCCATTCTCCACCATCGCTATCTG
TCTCGTCTTCATCATCATCATCATCATAGCTGTCTGTAGCCTCTTCATCAGAGACTTTAA
CCATTAGCTCATCAACTTTGTCATCTTTCAAATCCATATCATTGATTTGTTTTGAAATTT
CTTCAGCCAGTTTATCATCATCAGTTTCATTTGTTGTTGTTTGACAGTTTTGTTGGTGTT
TGACTTCAAATGACTCTCCAGTTTCAACATTCACAGTCTCTCCTATGGGTTGTTGTAAAG
GTTCACTGGTCTCTTTGTTATTGTTTGCATTAGAGTCTTTCTCACCTGTTTCCTGATTGG
CATTTTCATAATTGGGATGAAGGTTAAACCCAGCCAATCCTGTAACTTTAACAGATTTTT
GCATAGTCGGTTCATCTTTGAGATGTTCCGTACCGCCAACCTTCTCCTTCTCTAGCTGGT
AGGTCAGTGCCATAACCTTAATATCTGTAGCAGAGAGGCTAGAATAATCACCTGTTTTCT
TCGAGAATTCAGTAATGAATTTTATGTTATCTGCGAAGACATCCTTGACTTTTAAGTCGT
ATGGAAGGACAACGAGCTTTTTTCTTTGCCTATCATTAGTTATTTCATCAATAACCTCTT
GTATAGTATAAACATTTTCAGCAATGTCTTGAAGGTTTGCCGCCCTTATGAATGCAGAGG
TATCCACAATCAGATGCTTGATAGACTTCGGCATTGCGCTGAACACTAATCACGATATTA
ACTTTACATGTGTATAATTCGTTATGCAAAACGAACTTGTTTAGCTCACGTGTG
(2874 bp)

- SilkBase 1999-2023 -