SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13319_c0_seq3
Scaffold_idBomo_Chr21
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_RNA-binding_protein_NOB1_[Bombyx_mori]
Ontology
GO:0000469 P cleavage involved in rRNA processing
GO:0004521 F endoribonuclease activity
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0007601 P visual perception
GO:0030490 P maturation of SSU-rRNA
GO:0030688 C preribosome, small subunit precursor
GO:0042274 P ribosomal small subunit biogenesis
GO:0046872 F metal ion binding
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
Transcript
Level		FPKM:0.29 TPM:0.29
ORF EntryO_BomoSK13608_complete:A_BomoSK_comp13319_c0_seq3
Sequence
(Nucleotide)
GTCAAGTTCCAACCCCGGGACCTGGGGATTGTTTATTTTTCAGTTTCAAGACCTAGATGC
ATATAAATTCAGCTGTAATAAAACATATATCAATGTGTTTCCCTGAGGTGATCAATACTG
CAGGATGCGTACTTACCACCCTCTCTGTTGCAGTTCATGAATGTAATTCGCGCAGTACGC
ACGTCGATATCAAAAGTACGACTGCGACCTCACAGAAAGTCGATTGCATCTAGTGCTAAT
AAAGTGCATTACAAAATGGAGGGAACGAAAACTATGAAGGAACTGGGATACATATTTGAT
TCAAATGGTCAAGTAAGAAAAATTGGAGCTGATGGACAGCCAACAGATGAACCATTCCAA
TTTGTTGTGAGCAATGATCACCAGGAATGCCAAGCTCATTATGAAGAACTTGGCTCAGCA
ATCACCAATTATGTTTATGATATTCTTCAGACTCAGATTGGATTGCAAAAGTTACCAATC
CCAAAGGATTCAAATGATGGAACATTTATTTTTGTTTCAAAAGATTATGATAAAAAAGAT
GTTCTGTTAATATTGATTCACGGATCAGGCGTTGTGCGAGCTGGTCAGTGGGCTAGATCC
CTCATAATCAATGAATCGTTGGACAAAGGATCTCAGATTCCGTATATCAAGAAGGCTTTG
GCCAAAGACTATGGAGTAGTGGTACTAAATACAAATGACAATCACACAGCAGATGGAAAG
ACCATTCTCAACAGTAGCACCGCTGAGGAACATGCCCTTTACGCATGGCTGAACTACATA
TCCAATGCGAATGCAAGTTCCATACTCATTGTAGCACATAGTTATGGTGGGGTTGTCACG
GTTTCTCTGGCAGAAGAGGTGCAAAATGACTTTGAAGACAGAGTAAAGGCCATTGCTTTT
ACTGACTCTGTACATTCCTATTCTAATAAGAAGCTTACAAACTTTTTGAAACAGGTAAGA
ATGTAACTGGAGGCATGCACAGTTGAAATTTAACTTTTCCTAATTGGTTTCTCGATATTA
CAGGTTACAAAGAATTGGATATCTAGTCAGACACCGCTGGATACACCTCTCAGAACTCCT
GATTTCGATATAACCAGACTTTCAGCAGGTATAAATATTGCATTCATAAAATCAAATTAT
TTGTGTTTTTAAGGGGAATAGACTATGGCTATTCTTTCTTCTATGAACTTATTTTCTAGA
TTATAATTACATACTTATCCAAATCTTTGCACTGCCTTTGTCCATGAGTAACACTGAGCA
TTAATCACTGGTTCAGCTAAAAGCTTACTATTAAGTGCTGCAATAGTAACATTGAAGCAA
CCATTGGTAAAGGTTGACTTAAACCACTGAAACTCTGCATTTGTGTTGTGTCAAATATAT
AAGAAAACTTTGTTTGCAGGTCATGAGAAACATGAAATGACATCATACATGTGTATGGAT
TCTGTTTTTAAATACTTTGATGAAATACTAAATATGGATTAAAACGAATATTCACGTGGT
ACTACTCTGTTATAATAGCGAATTTTTATTCTCTGGTTATGTTTAAGAATGAGCATTTAT
TAATGTTAAATTTATGTCTATGTACCTAGTTAGTTAATAAATAAGAATGTGTTTGTTTCA
ATTTATTTCTTCTTTCCTTTAGAATAATGCTTCATCCAATATTTTATGTCCTGATTGTTG
GCACGCACCCCCAAGACAGCCGATTTGGAATTCACATCTTTCATTGCGAATGGAGAAAAT
CCTGCAGTATAATCAGGATCTAGAGCATTTGTTTTGTTTCTTGCTAATTTGGTAACAAAT
CTTTTGTGTATATGCTGGTCTTCAGTTAAAATTGGGTATTGAAAATGTTGACCACCTTTT
GGTGTAGGTAAACTAAATCTTTTTCCTCTTGCTGTTAAAGGTTTACGTCCATTTATATGT
ATTCTTTGATTACCATCTTCATCAATACTCACTGCAACTTTTTTTAAAGTTGCATGACCA
CATTTAGGACAGAACAGTTTTGTCATTACACTAGTTGTTTTGAAACAGGTTGTGCAACGA
AAAATAAATGTACGTAATTGTCTTATAATTCTTCCATCTATTGATGTAACATTTAGTCCT
ATCTGCTTTAAAACATTTTGCATTGCAAAGTCCGAAGTGATGCAGGCAACTTCAACATCT
TTTTCTTTGAATTCACCAAGTTCCATCTCTTTTCGTTTTTCAGCCAAATTTTTGGTTGTG
ATCCATTCTCCACCATCGCTATCTGTCTCGTCTTCATCATCATCATCATCATAGCTGTCT
GTAGCCTCTTCATCAGAGACTTTAACCATTAGCTCATCAACTTTGTCATCTTTCAAATCC
ATATCATTGATTTGTTTTGAAATTTCTTCAGCCAGTTTATCATCATCAGTTTCATTTGTT
GTTGTTTGACAGTTTTGTTGGTGTTTGACTTCAAATGACTCTCCAGTTTCAACATTCACA
GTCTCTCCTATGGGTTGTTGTAAAGGTTCACTGGTCTCTTTGTTATTGTTTGCATTAGAG
TCTTTCTCACCTGTTTCCTGATTGGCATTTTCATAATTGGGATGAAGGTTAAACCCAGCC
AATCCTGTAACTTTAACAGATTTTTGCATAGTCGGTTCATCTTTGAGATGTTCCGTACCG
CCAACCTTCTCCTTCTCTAGCTGGTAGGTCAGTGCCATAACCTTAATATCTGTAGCAGAG
AGGCTAGAATAATCACCTGTTTTCTTCGAGAATTCAGTAATGAATTTTATGTTATCTGCG
AAGACATCCTTGACTTTTAAGTCGTATGGAAGGACAACGAGCTTTTTTCTTTGCCTATCA
TTAGTTATTTCATCAATAACCTCTTGTATAGTATAAACATTTTCAGCAATGTCTTGAAGG
TTTGCCGCCCTTATGAATGCAGAGGTATCCACAATCAGATGCTTGATAGACTTCGGCATT
GCGCTGAACACTAATCACGATATTAACTTTACATGTGTATAATTCGTTATGCAAAACGAA
CTTGTTTAGCTCACGTGTG
(3019 bp)

- SilkBase 1999-2023 -