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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13288_c0_seq1
Scaffold_idBomo_Chr12
NCBI non-redundant
(nr)		PREDICTED:_pre-mRNA-processing_factor_40_homolog_A_isoform_X2_[Bombyx_mori]
Ontology
GO:0000398 P mRNA splicing, via spliceosome
GO:0003674 F molecular_function
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005685 C U1 snRNP
GO:0008150 P biological_process
GO:0071004 C U2-type prespliceosome
Transcript
Level		FPKM:9.81 TPM:9.87
ORF EntryO_BomoSK13456_complete:A_BomoSK_comp13288_c0_seq1
Sequence
(Nucleotide)
TTTTTTTTTGAGCTAAAGTTGTGTACAAGAGGTCCTTGCGTTTTATTAATTTGAACTACT
ACCATTACATACATTACAACAATTCATTTTGTGCCTTTCCAACTATAATAACATTTTGTT
GCCGACAGTTTACGATTTATAAAGTCTAGTTCTTACTTAAAAAAAATTTAAAAAGCGACA
GTATTTGGTAGCTCAGTCATGGAGCCACCCAGTGCGGGGACCAGTTCTCCGGGTCTCTTA
AACGCGCCTCCTCTTTTACCGCCTCCAATGCTAAGCGGTATGCCTCCACCAATGCCGCCC
GCTGTGGCAATGCCACCAGTGCCTGGGTTACCTCCAAATATGGCTACATTACCACCGCCC
ATGGGCTTTCCTCCCATGTTGCCGCCTCCATTTTCAATACCACCGCCAGGATTCCCTGCA
TTCAAACCGGAATTAAATGCTCCTGCACCAGATGTTGCTCCATCGGCAAATCAAAGTAGT
CCATGGTCTGAACATAAGGCCCCTGATGGAAGAACATATTACTATAATTCTGTAACCAAA
CAAAGCTTGTGGGAAAAACCTGACGACTTAAAAACGTCAGCTGAGAAACTATTATCTGCT
TGTGTATGGAAAGAATATACCACAAATACTGGCAGACTTTACTATCATAATATTGAGACA
AAGGAGTCCAGTTGGGTAGTACCGAAAGAATTACAGGAGATTAAAGACAAAATTGCTGCT
GAAGAAGCTGCTCAGCGCATTGTGATGGAAGTAACACCGAGTGAGGTGCCGCTGCCGGCA
GAGCCTGCAGGCTCCTCCGCCCTTGACGAAGCTATGGCTAAAACATTAGCAGCCATTGAT
ACCTCATTGGCCACATCCATACCTGTACCTGACGAAAAACCAGAAGACACAGTTTCAATT
AATAATGAAACTCAAGAACAACCTGAGATGTTGTACAAAGACAAGAAAGAAGCTATTGAA
GCATTTAAAGAACTCCTGAAAGATAAGAATATACCCTCAAATGCAACATGGGAACAATGT
GTAAAAGTTATTTCAAAAGATCCACGATATGTCACTTTTAAAAAACTCAATGAAAAGAAA
CAAGCGTTCAATGCTTACAAAACTCAAAAACTAAAAGATGAAAGAGAGGAACAGAGACTG
AAAACAAAAAAAAATCGCGAGAATCTTGAAGAGTTTTTGTTGAGTTGCGAACGGGTGACA
TCTCTAACAAAATTTTACAAATGTGAAGAAATGTTCAGCAATCTAGAGATTTGGCGATGT
GTTCCAGAAGCCGATCGTAGGGACATATTTGAAGATTGTATTTTTACTATAGCGAAACGG
GAAAAAGAAGAAGCAAAGGCTTTAAAGAAACGGAACATGAAAATGTTAACCCAGGTATTA
GAGAACATGAGCGAAATTACGTACAGTAGTACGTGGAGTGAGGCACAAGTACTATTGCTA
GAAAATTCAGCTTTTAAAAATGATGTTAGTTTACTAGGTATGGACAAGGAAGATGCCCTG
ATTGTATTTGAACAACACATACGAAATTTAGAAGCTGAATATCAACAAGAAAGAGAACAA
ATTAAAAAGAGGAATAAAAGACAACAAAGAAAAAATAGAGACAACTTTTTGGCTTTGCTG
GACAGTCTTCATGAAGAAGGTAAATTGACATCGATGTCT
(1659 bp)

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