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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13268_c0_seq1
Scaffold_idBomo_Chr20
NCBI non-redundant
(nr)		PREDICTED:_dystonin-like_[Bombyx_mori]
Ontology
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005903 C brush border
GO:0005925 C focal adhesion
GO:0008092 F cytoskeletal protein binding
GO:0008307 F structural constituent of muscle
GO:0016528 C sarcoplasm
GO:0030054 C cell junction
GO:0030056 C hemidesmosome
GO:0030506 F ankyrin binding
GO:0031581 P hemidesmosome assembly
GO:0042383 C sarcolemma
GO:0043034 C costamere
GO:0043292 C contractile fiber
GO:0044822 F RNA binding
GO:0045111 C intermediate filament cytoskeleton
GO:0070062 C extracellular exosome
Transcript
Level		FPKM:7.93 TPM:7.98
ORF EntryO_BomoSK13398_complete:A_BomoSK_comp13268_c0_seq1
Sequence
(Nucleotide)
TTACAACATCGCAGGCTCACTCGCACCGGGCGGCGATAAGCCAATCCAGTTTGACAATTC
GCTAGCCTCGGATCAGCCGCCGGCTCAGTTGGCCGATGCACGGCGTCGCGGTAACGTGTC
CGCCATTTTCCCGCGCTACCCATCCCGACGGTATCAAACACCGGGCTGTTTATTAAATCA
AAAATTAATGTGCTATCTCCGTTTCTGTTTGCACAAATGTGAATCGAGAAACTTTTATAT
CCAAAGACAAAGTGAACTATAAGTAATTCAAACCGCAACCAAGCATTCCAGTCTAACTCT
TAATGTTGCCATAATTAAAAAAAAAAAACTACCTTTTTATTACTAAACAAGGCATCCGTT
TAATACGAATAAGTGAATAAAAAATTGTGTCAAGATCAATAAGTGTGTGTCAAGGGGCTT
ACAACTTTCCTTTTGTAGCAGTCGATGACATCGATCGTTGTAAAACAGTGGTGGATCGTT
TAAATTAAACCTTAGTGGCTATAAACGGGCTTATTGTGGAAGGATTTTGGCGTATCCTTT
CACAATACCGGTGCGAGCGATTTTGTTGTTCAAAAAACTATCGACAAAAAAGTGACGAAA
CTAATACGCGAGTGAATAAAAAAAAAAACTAAATAAAAAAAATAAAAAAACATTCTAATT
TTGAAATGCTTCGAGTGCGCGCGTGAATAATGTCAACACAAGCGTACTACAAGGAGCGTT
TGGGCTTCGACCCCCAAGAGGCGATGCAAGATGGCGTCAACGGAAACGGATTTTACGACG
GCCCACACCAGCCGAAGCGGCAGAGGAGCGAGCAGCGCCACCCTTCCGAGACCCACGATC
AAGTCTACGAAGAAAACCTAACTAAATTCAAAGACGAACGTGACGCTATACAGAAGAAGA
CGTTTACAAAATGGGTCAACAAACATCTCAAAAAGGTGAATCGTCACGTGAACGATCTGT
TCGAGGACCTACGCGATGGACTGAACCTCATCTCGCTGCTGGAGGTGCTATCTGGCGAAC
ATCTCCCGCGCGAGCGAGGTCGCATGCGTTTCCATATGCTGCAAAACGTCCAAATGGCCC
TGGACTTCCTCCGCTACAAGAAAATCAAGCTCGTCAACATCAGAGCTGAGGATATCGTCG
ACGGGAACCCAAAGCTGACCCTAGGTCTGATCTGGACTATCATCCTGCACTTCCAGATAT
CAGACATCGTCGTTGGACAAGAACCAAACGTGACGGCCCGGGAAGCTCTCCTGAGCTGGG
CCCGACGCTCCACGGCCAAGTACCCTGGGGTGAGGGTGAGCGACTTCACGTCTTCTTGGA
GAGACGGGCTCGCCTTCAACGCGCTCATACACAGGAACCGCCCTGATCTGATAGACTGGC
GTAATATCAGATCAAGACAAGTCCGTGAGCGCTTGGAGACAGCCTTCCATGTAGTCGAAA
AGGAATATGGAGTCACCAGACTGTTGGATCCTGAAGACGTGGACACCCACGAGCCGGACG
AGAAGTCCCTCATCACGTACATCTCGTCGCTGTACGAGACGTTCCCGGAGCCCCCGGCCG
TGCATCCGCTGTTCGACGCGGAGTCCCAGCGCCGGGCGGCCGCTTACACCGAGCAGGCGG
CCCAACATCGCGCTTGGCTGCACGAGAAATGCGCGCTAATGCAGGACCGTGCTTTCCCGT
CAACTTTGATAGAAATGAAGAAGCTGCTCAGCGAGAGCACGCGGTTCCGCAACGAGGAGG
TGCCGCTCAGGCAGAGAGAGAAGCAGAAGCTCGTCCACCAGTACAGGGAGTTAGAGAAAT
ATTTCGAAACAGTGGGCGAGTGCGATATCGAGCCGACGCTGCGCCCCGAGGCGCTGGAGC
AGGGCTGGGCGCGGCTGCTGATGGCGCAGCAGGAGCGGGAGCGCGACCTCACCGACGAGA
TTCGGCGCCTCGAGCGCCTGCAGAGACTGGCCGAGAAACTGCACAGGGACATCAAACAAA
CCGAAAGCGGTCTGGACAGCGTGGAGCGGCACATCGAGGGGGAGCTGCGTCGCGTGGAGC
GCGGCGTGCACCCCGCCGACGCCAAGACCGCCGCCGAGCAGATCGAGCACGACCTGCGCG
CCATGGAGCTCGCGCTGCACGAGATGTTCCAGGACGCGAACGCGCTCCGGGAGGGGAGGT
ACCCGCAAGCCAACGAGCTGCACAGGCGCGTGCAGCAACTCCAGGAGCGCTGGGCGCTGG
CCCGACAGGCGCTGGCGAGCCGGCTGGTGCCGCGGCTG
(2258 bp)

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