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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13264_c0_seq3
Scaffold_idBomo_Chr5
NCBI non-redundant
(nr)		PREDICTED:_protein_grainyhead_isoform_X4_[Bombyx_mori]
Ontology
GO:0003382 P epithelial cell morphogenesis
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007009 P plasma membrane organization
GO:0007399 P nervous system development
GO:0007402 P ganglion mother cell fate determination
GO:0007419 P ventral cord development
GO:0007424 P open tracheal system development
GO:0007426 P tracheal outgrowth, open tracheal system
GO:0007428 P primary branching, open tracheal system
GO:0007464 P R3/R4 cell fate commitment
GO:0008360 P regulation of cell shape
GO:0008362 P chitin-based embryonic cuticle biosynthetic process
GO:0035152 P regulation of tube architecture, open tracheal system
GO:0035159 P regulation of tube length, open tracheal system
GO:0040003 P chitin-based cuticle development
GO:0042052 P rhabdomere development
GO:0042127 P regulation of cell population proliferation
GO:0042803 F protein homodimerization activity
GO:0043565 F sequence-specific DNA binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0061024 P membrane organization
GO:0061041 P regulation of wound healing
Transcript
Level		FPKM:5.62 TPM:5.65
ORF EntryO_BomoSK13384_complete:A_BomoSK_comp13264_c0_seq3
Sequence
(Nucleotide)
CGCTCCGTAGCGCCGCTCGTCGCGTGCTCGAGTACCCGCGCTCCGGCCCGCGCGCCGCGT
GAACACGCCGCCCACGATTTTACTGATATCAAGTGTAGAGCGGGGTGCTCCTGAGAGGAG
TCTCCGCCCGCACAAAGACGTCGCCCTTCGTAGTGAGACAGGGCGGGATGTCCGCGTCGC
CACAGCACGCGGGCGCTTGCGACGAGCGGGCACGCACGCCCAAAGCTTGCGGCTCGCCCG
CGTCCGCCCCTCGCTCACCGGCCCCCGCACACGCTGTCCTAGCTACCATGACCCCGGTGC
AACCCGCCCATGATTACTACCCTCATAAAGTAGAGATGGATTCCGATGATGGGTATCCTC
CTGAGGCCCATTCGTATCGGCACTCGCCTCACGAACTAGCCGCCTATGCTACCGACAGTA
AAGTGCCCGTTCAACCAGATGTTTACGAACAAGGCATGGAGTCAATAGATGAAAAAACTC
CTATTGATCTGATTTATGAAGATGATAAGCAGACTGTAATATACACAACGACACCAGATC
AAAAGCGCGTGGAGATGATCAGTGGGCAGCTTGAAGACGGTCAGCTGGTGAGCGGAGGAG
GGCAACTGGTCGACGGTGGTGTCTCTGTTGTTGTGGGCGCTCCTGGACAACCACCAACGG
TTCTGGTCTTAGCTGATCACATGGTCGATGAACTTGGTCAAGTTATCACCATTCCCAGGA
GACGCAAAGAGGTGATGGAAGTAGGCGGAGAGACATGGCGCGCGTATTATTCCAGCGGGG
CGGATCACCCGCTGAGCGCGGCTACGTCGGCCGTGCTTGGCGTCTCAGATGATCAACAGC
CTCAGCCGCTTGTCGCTGATTATTACAAGCTTCCTCCACTCGGACAAGATACCCATCTGC
ATCTCCACAAGGATGCTAAACTTGTTGATGTCTGGCCGGCCGGCGCAGCACTAAAGGCAG
CCAATGGCGCGCACGGGGCGGAGTTGGGCGAACTCTCGGGCCTGCTCCACGCGGGCCTCG
TGAAGCGCGAGCCCGAGGACCTGAGCCGCAAGGTGGTCGACGAGCCCGAGCCGCACGCGC
TCAAGCCGCCTCGACATAAGTCGTTCGACTACACGGTAATCTGCCAGCAGCCCGGCGTCG
GCGAGGACGGCCGCGGCACCCCATCGGCACATCACTCGCCCGCGCAGGCTCCACGCACGC
GACCCTGGCATGACTTTGGAAGACAGAATGACGCCGATAAAATTCAAATCGCTAAATTGT
TTTCCCCATATGGGTTCAAATACCATTTGGAAACGGCGAGCAGCAGTTCACAGCGGCGCG
AAGACGACCGTATCACGTACATCAACAAGGGCCAGTTCTACGGGATTACACTTGAGTACA
TACACGATCCCGACAAACCACTTAAAAATCAAACTGTAAAGAGCGTTGTAATGCTGATGT
TCAGAGAAGAGAAATCACCAGAAGACGAAATCAAAGCGTGGCAATTCTGGCACGGGAGGC
AGCACTCTGTCAAACAAAGGATACTGGACGCTGACACTAAGAACAGCATCGGTTTAGCGG
GTTGTATCGAGGAGGTCGCTCACAACGCCATCGCAGTATACTGGAATCCATTGGAGAGTG
CTGCAAAGATCAACATTGCAGTGCAATGTTTAAGTACAGACTTCAGCAGTCAAAAAGGCG
TTAAGGGTCTTCCATTACATATTCAAATTGACACTTTCGAAGACCCGCGAGACACACAAG
TTTATCACAGGGGATATTGTCAAATTAAAGTTTTCTGTGACAAGGGCGCAGAAAGGAAAA
CTAGAGACGAAGAAAGAAGAGCAGCGAAAAGAAAGATGTCGGCCACAAACAGAAAAAAAC
TGGACGAAATATACCACCCGGTGACCGAACGGAGCGAATTCTATTCGATGGCGGACTTGT
CTAAGCCACCGGTTTTGTTCAGTCCGGCGGAGGACATCGAGAAACTGACCGGAATGGACA
TACAGGGCTTCTATGGACATGATGACGCATCATTAGCAGAAGCGCATCTAAAGGGTGCCT
CACCCTTCCTTCTGCACGCGGCAAAGCCTCAAGCGCCTGCGCTTAAATTCCACAATCACT
TCCCACCGGACGCGCCAGGATACCGGGAGGTGGGTGCGTTATCTCCCTATGACCGCAAGG
ACTCGTTGGAGCTAGAGGGTGTACTGGGTAAGCGGGCGCGCACGTCCACGCCGCCGCTGA
GCGAGCGCGTGATGCTATACGTGCGGCAAGACGCGGAGGACGTGTACACGCCTCTCCACG
TGGTGCCCCCCACCACGCAGGGACTCATGCATGCGATTGAGAATAAGTACAAAATTTCAA
GTTCGGCCATTAATAATCTTTATCGAAAGAACAAGAAAGGGATTACGGCCAAAATTGACG
ATGACATGCTCGCGTATTACTGCAACGAAGATCTGTTCCTGCTCGAAGTAGTGCCGGCAG
GTAACACAGACGACGAACGGCTCTACGACATCATCTTTGTGGAACTGCCCTTAGAGCATT
AGCCTTCGCGCCGCCTTCTTCATACAATGAACACTCTCCCGACGTATTGATGCGAACTTT
AGTTCAAAAACTTTAACATTCCCCTTTAGCACTCATGCGAAAATCTATTATAATGGGATA
AGTTTGTCGATCTCAGATTGAAATTTACTTTTAAGCGATCCATCATCTTAACTTAATTTT
AAATAACTCGACATCACAAATGTCTTCGTCATAACATTACGATAAAATGAATTGTAAATA
TATATAATTTTATAGTGCCTTATGAAATTAAGCGAGATCGAATTTGTTGGTGGTGGCAAA
TGAAATTCGTATTTGGTATCCAGAAGTTGCGTATATTGAATGATAATTATCATCTTGTAA
ATGATGAATGATCCGTTGCTGAATTAAACGTGTGTGCCATTCACTCGGTTATTATATTAG
ATGTAATTTAGTTGTCCTCTCAACAGGTACCTTTTAATCTTGCCATGATGATAAGGAACT
CTTGTCACAAATCATTAAAGCATAAAGTGCCTTTGTCATAATAATATTATATTAAATCTT
TATTATAAGTGAGTTAAGTCATATTAAATGCCATCCACTTTGTTAAGTTTTGTAAGCTTA
AGTTTGCTTCATAAGCCCGCTCAATTTTATCATTTAGTACTTTAAAACGTACATTAGAAA
TTTAAGTTGAATAATGTTCATTGCTTTTATTATTTTACATTGAAATTTTAAAAAAACCTA
AATAACCAATCCCTGGTAATTACCACAGGACTTCTGTGGGCGTAAGGCACGCCGCACACA
ATTTTAAGAATTAAAACGTTACAAAAAATGAATGGTAAAAATATGTCTTTTTTTTCTACA
TTGACCTGTAAACTATGCATACAACTCACAACACACAACTCGTTTAATAGAGCAATGAAC
ACAAAACACGATTTCCAGTCACATTTTTTCCACAAATACTTCATCGCATAGTCATATGTA
ATTAGTCACAAAAATGGTCCATCTGAACATTATTACCCACGGGAATGGTTTGTGAATAAT
TTTAAGTTTTAATCGATATTAGATTGTTATTTTAAATGATTTCGAAAAATTAGGTTATCT
GGCCATGACAACATTTTAGTTTTATAATATTTGTGTCCAAGACTTATTTACACGTAAGGT
TTCATATCAAACAGACATGTTTGTCTAGTTTATCTTAAGAGTAATCTACAACAAAAATAT
TAGTTTCATTAGAAACACCGTAATTTGATGAATAAACACCACATCGTTTTTAAAATTGAA
ATATATAATAGAATGAAATATTTTAATATTCTTCCACCGATACTATATCAATCACACAGT
TCAGTAATGTATTATACTCGTATTTGTCAATCTCTTCGGTCGCAGATAAACGCCAGGTGT
AATCACAAACGTGCCTAGTGCAGACGGTTTGTTTAACTGCCATATTATGACATAGTTTAG
AATACTTAATGACTTTAGTATATAATTTTATATTAGTTTTTAATGTGACTTGAGGTATGA
TGCATCGAATTTTAAAATTAAGATCATGTTATCGATATACAACGTATTTGTATGTAATGT
GTTTGTTTTGTGTTATTTTATTTGTCGCGACTCGTCTGGCGGCGTCTGTTCGTCGCCTTC
GATGTCCTTTCTTCCATTATTTGGCTCGTGTACACTTGTTAATTTGTATCCACAATTTTA
TATTTCTTTAATATTATTATTATTTCTTTTACATGTATTTTATAAGCATTCGTTGCTCAA
AGTCTGCGTTAGCCACTAGTTGGGCGGACTATAACATTGTTTTACCTACTTAAACTTATT
CCAATAATTGTATTTATTTATATACTTATCATAAATTGCAGCTTTAATGTATACTTACAA
TGATGTTAGATCGTGATTCAGAATCTCGTCATAAGTCACAAATGTCAGTAGCAATAATAC
GTAAATCAGGCGTTGTGAATTAATGGCTGCGTTGCTTGTCGTGTCGCCAGCCGAGCCCCT
TTAATGGTTGTGCAATGTTTAAATGAGAGTATAATATTTGTGTAATTATTGAAATGAATA
CTGCATGTTATTGTAGGATGTTCGGTAATGTGGAGAA
(4597 bp)

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