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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13264_c0_seq2
Scaffold_idBomo_Chr5
NCBI non-redundant
(nr)		PREDICTED:_protein_grainyhead_isoform_X1_[Bombyx_mori]
Ontology
GO:0003382 P epithelial cell morphogenesis
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007009 P plasma membrane organization
GO:0007399 P nervous system development
GO:0007402 P ganglion mother cell fate determination
GO:0007419 P ventral cord development
GO:0007424 P open tracheal system development
GO:0007426 P tracheal outgrowth, open tracheal system
GO:0007428 P primary branching, open tracheal system
GO:0007464 P R3/R4 cell fate commitment
GO:0008360 P regulation of cell shape
GO:0008362 P chitin-based embryonic cuticle biosynthetic process
GO:0035152 P regulation of tube architecture, open tracheal system
GO:0035159 P regulation of tube length, open tracheal system
GO:0040003 P chitin-based cuticle development
GO:0042052 P rhabdomere development
GO:0042127 P regulation of cell population proliferation
GO:0042803 F protein homodimerization activity
GO:0043565 F sequence-specific DNA binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0061024 P membrane organization
GO:0061041 P regulation of wound healing
Transcript
Level		FPKM:27.23 TPM:27.38
ORF EntryO_BomoSK13381_complete:A_BomoSK_comp13264_c0_seq2
Sequence
(Nucleotide)
AGGTGCGTCACACGTTCGTACGCCGCCGTCGCGCGCGCACGCACTCACACACTTACTAGT
TACTCATGTATTATTTAACGCGGTTTGCGTACGATGCGCCGAGCAACTCGCTCGAATCGC
ACTAGCCGCGCCCGCCCGCGCCCTTATCTGGCCGGCAAGCGCTGCCCGCCCAGACCGCAT
CGACGCAGGCGCCCTCTAGACTACACTACCACGGATTGTTTACATTAGTTGTTGTGAACG
TGTCGAGGTCGAAAGAACCTAGTGTACGTGAAGCTGTGAATTGTGTATAGACGCGGCATG
TACGCGTCTACTTTACGAAGCGGACAGTTGTCGTGGGAGAACGCGTGTAACAGACGCGTG
TGTCCGCAGGTGGTGGTCGGCGAGCCTGGTGAAGCGGCGTCGCCGTCCCCGGTGCCATCG
CGAGCTTCTTCAGCAGGTTCACTACTTCCGGACGCAACGATGTATACCACCCAAATGTTT
GCTCCACCGGGCACACCTAGTCCCACCCCCTATGGCGATCAATATTCAAGACAGCCTTCG
ACTTTTGCGGGTGAACCTTACTACAGAGAATATTTTGTCGGAGAAGGCTACCAGCAGAGA
GCTGCACCACCTTATGATGGAGAACCGGCTTCAGGTTCTGCGTTTAGCGAAAGATATGCT
GCACCACGGTATCACAGCAAGAGCGTGATCGCAGCAGCCGGACTGACAGTGGACTTGCCA
TCACCGGATAGTGGCATCGGTGCTGACGCAGTCACCCCTCGGGACCACACTGCCGTGCAG
CAGTCGTTCGACTACACGGTAATCTGCCAGCAGCCCGGCGTCGGCGAGGACGGCCGCGGC
ACCCCATCGGCACATCACTCGCCCGCGCAGGCTCCACGCACGCGACCCTGGCATGACTTT
GGAAGACAGAATGACGCCGATAAAATTCAAATCGCTAAATTGTTTTCCCCATATGGGTTC
AAATACCATTTGGAAACGGCGAGCAGCAGTTCACAGCGGCGCGAAGACGACCGTATCACG
TACATCAACAAGGGCCAGTTCTACGGGATTACACTTGAGTACATACACGATCCCGACAAA
CCACTTAAAAATCAAACTGTAAAGAGCGTTGTAATGCTGATGTTCAGAGAAGAGAAATCA
CCAGAAGACGAAATCAAAGCGTGGCAATTCTGGCACGGGAGGCAGCACTCTGTCAAACAA
AGGATACTGGACGCTGACACTAAGAACAGCATCGGTTTAGCGGGTTGTATCGAGGAGGTC
GCTCACAACGCCATCGCAGTATACTGGAATCCATTGGAGAGTGCTGCAAAGATCAACATT
GCAGTGCAATGTTTAAGTACAGACTTCAGCAGTCAAAAAGGCGTTAAGGGTCTTCCATTA
CATATTCAAATTGACACTTTCGAAGACCCGCGAGACACACAAGTTTATCACAGGGGATAT
TGTCAAATTAAAGTTTTCTGTGACAAGGGCGCAGAAAGGAAAACTAGAGACGAAGAAAGA
AGAGCAGCGAAAAGAAAGATGTCGGCCACAAACAGAAAAAAACTGGACGAAATATACCAC
CCGGTGACCGAACGGAGCGAATTCTATTCGATGGCGGACTTGTCTAAGCCACCGGTTTTG
TTCAGTCCGGCGGAGGACATCGAGAAACTGACCGGAATGGACATACAGGGCTTCTATGGA
CATGATGACGCATCATTAGCAGAAGCGCATCTAAAGGGTGCCTCACCCTTCCTTCTGCAC
GCGGCAAAGCCTCAAGCGCCTGCGCTTAAATTCCACAATCACTTCCCACCGGACGCGCCA
GGATACCGGGAGGTGGGTGCGTTATCTCCCTATGACCGCAAGGACTCGTTGGAGCTAGAG
GGTGTACTGGGTAAGCGGGCGCGCACGTCCACGCCGCCGCTGAGCGAGCGCGTGATGCTA
TACGTGCGGCAAGACGCGGAGGACGTGTACACGCCTCTCCACGTGGTGCCCCCCACCACG
CAGGGACTCATGCATGCGATTGAGAATAAGTACAAAATTTCAAGTTCGGCCATTAATAAT
CTTTATCGAAAGAACAAGAAAGGGATTACGGCCAAAATTGACGATGACATGCTCGCGTAT
TACTGCAACGAAGATCTGTTCCTGCTCGAAGTAGTGCCGGCAGGTAACACAGACGACGAA
CGGCTCTACGACATCATCTTTGTGGAACTGCCCTTAGAGCATTAGCCTTCGCGCCGCCTT
CTTCATACAATGAACACTCTCCCGACGTATTGATGCGAACTTTAGTTCAAAAACTTTAAC
ATTCCCCTTTAGCACTCATGCGAAAATCTATTATAATGGGATAAGTTTGTCGATCTCAGA
TTGAAATTTACTTTTAAGCGATCCATCATCTTAACTTAATTTTAAATAACTCGACATCAC
AAATGTCTTCGTCATAACATTACGATAAAATGAATTGTAAATATATATAATTTTATAGTG
CCTTATGAAATTAAGCGAGATCGAATTTGTTGGTGGTGGCAAATGAAATTCGTATTTGGT
ATCCAGAAGTTGCGTATATTGAATGATAATTATCATCTTGTAAATGATGAATGATCCGTT
GCTGAATTAAACGTGTGTGCCATTCACTCGGTTATTATATTAGATGTAATTTAGTTGTCC
TCTCAACAGGTACCTTTTAATCTTGCCATGATGATAAGGAACTCTTGTCACAAATCATTA
AAGCATAAAGTGCCTTTGTCATAATAATATTATATTAAATCTTTATTATAAGTGAGTTAA
GTCATATTAAATGCCATCCACTTTGTTAAGTTTTGTAAGCTTAAGTTTGCTTCATAAGCC
CGCTCAATTTTATCATTTAGTACTTTAAAACGTACATTAGAAATTTAAGTTGAATAATGT
TCATTGCTTTTATTATTTTACATTGAAATTTTAAAAAAACCTAAATAACCAATCCCTGGT
AATTACCACAGGACTTCTGTGGGCGTAAGGCACGCCGCACACAATTTTAAGAATTAAAAC
GTTACAAAAAATGAATGGTAAAAATATGTCTTTTTTTTCTACATTGACCTGTAAACTATG
CATACAACTCACAACACACAACTCGTTTAATAGAGCAATGAACACAAAACACGATTTCCA
GTCACATTTTTTCCACAAATACTTCATCGCATAGTCATATGTAATTAGTCACAAAAATGG
TCCATCTGAACATTATTACCCACGGGAATGGTTTGTGAATAATTTTAAGTTTTAATCGAT
ATTAGATTGTTATTTTAAATGATTTCGAAAAATTAGGTTATCTGGCCATGACAACATTTT
AGTTTTATAATATTTGTGTCCAAGACTTATTTACACGTAAGGTTTCATATCAAACAGACA
TGTTTGTCTAGTTTATCTTAAGAGTAATCTACAACAAAAATATTAGTTTCATTAGAAACA
CCGTAATTTGATGAATAAACACCACATCGTTTTTAAAATTGAAATATATAATAGAATGAA
ATATTTTAATATTCTTCCACCGATACTATATCAATCACACAGTTCAGTAATGTATTATAC
TCGTATTTGTCAATCTCTTCGGTCGCAGATAAACGCCAGGTGTAATCACAAACGTGCCTA
GTGCAGACGGTTTGTTTAACTGCCATATTATGACATAGTTTAGAATACTTAATGACTTTA
GTATATAATTTTATATTAGTTTTTAATGTGACTTGAGGTATGATGCATCGAATTTTAAAA
TTAAGATCATGTTATCGATATACAACGTATTTGTATGTAATGTGTTTGTTTTGTGTTATT
TTATTTGTCGCGACTCGTCTGGCGGCGTCTGTTCGTCGCCTTCGATGTCCTTTCTTCCAT
TATTTGGCTCGTGTACACTTGTTAATTTGTATCCACAATTTTATATTTCTTTAATATTAT
TATTATTTCTTTTACATGTATTTTATAAGCATTCGTTGCTCAAAGTCTGCGTTAGCCACT
AGTTGGGCGGACTATAACATTGTTTTACCTACTTAAACTTATTCCAATAATTGTATTTAT
TTATATACTTATCATAAATTGCAGCTTTAATGTATACTTACAATGATGTTAGATCGTGAT
TCAGAATCTCGTCATAAGTCACAAATGTCAGTAGCAATAATACGTAAATCAGGCGTTGTG
AATTAATGGCTGCGTTGCTTGTCGTGTCGCCAGCCGAGCCCCTTTAATGGTTGTGCAATG
TTTAAATGAGAGTATAATATTTGTGTAATTATTGAAATGAATACTGCATGTTATTGTAGG
ATGTTCGGTAATGTGGAGAA
(4280 bp)

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