SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13264_c0_seq1
Scaffold_idBomo_Chr5
NCBI non-redundant
(nr)		PREDICTED:_protein_grainyhead_isoform_X1_[Bombyx_mori]
Ontology
GO:0003382 P epithelial cell morphogenesis
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007009 P plasma membrane organization
GO:0007399 P nervous system development
GO:0007402 P ganglion mother cell fate determination
GO:0007419 P ventral cord development
GO:0007424 P open tracheal system development
GO:0007426 P tracheal outgrowth, open tracheal system
GO:0007428 P primary branching, open tracheal system
GO:0007464 P R3/R4 cell fate commitment
GO:0008360 P regulation of cell shape
GO:0008362 P chitin-based embryonic cuticle biosynthetic process
GO:0035152 P regulation of tube architecture, open tracheal system
GO:0035159 P regulation of tube length, open tracheal system
GO:0040003 P chitin-based cuticle development
GO:0042052 P rhabdomere development
GO:0042127 P regulation of cell population proliferation
GO:0042803 F protein homodimerization activity
GO:0043565 F sequence-specific DNA binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0061024 P membrane organization
GO:0061041 P regulation of wound healing
Transcript
Level		FPKM:12.88 TPM:12.95
ORF EntryO_BomoSK13379_complete:A_BomoSK_comp13264_c0_seq1
Sequence
(Nucleotide)
CGCTCCGTAGCGCCGCTCGTCGCGTGCTCGAGTACCCGCGCTCCGGCCCGCGCGCCGCGT
GAACACGCCGCCCACGATTTTACTGATATCAAGTGTAGAGCGGGGTGCTCCTGAGAGGAG
TCTCCGCCCGCACAAAGACGTCGCCCTTCGTAGTGAGACAGGGCGGGATGTCCGCGTCGC
CACAGCACGCGGGCGCTTGCGACGAGCGGGCACGCACGCCCAAAGCTTGCGGCTCGCCCG
CGTCCGCCCCTCGCTCACCGGCCCCCGCACACGCTGTCCTAGCTACCATGACCCCGGTGC
AACCCGCCCATGATTACTACCCTCATAAAGTAGAGATGGATTCCGATGATGGGTATCCTC
CTGAGGCCCATTCGTATCGGCACTCGCCTCACGAACTAGCCGCCTATGCTACCGACAGTA
AAGTGCCCGTTCAACCAGATGTTTACGAACAAGGCATGGAGTCAATAGATGAAAAAACTC
CTATTGATCTGATTTATGAAGATGATAAGCAGACTGTAATATACACAACGACACCAGATC
AAAAGCGCGTGGAGATGATCAGTGGGCAGCTTGAAGACGGTCAGCTGGTGAGCGGAGGAG
GGCAACTGGTCGACGGTGGTGTCTCTGTTGTTGTGGGCGCTCCTGGACAACCACCAACGG
TTCTGGTCTTAGCTGATCACATGGTCGATGAACTTGGTCAAGTTATCACCATTCCCAGGA
GACGCAAAGAGGTGATGGAAGTAGGCGGAGAGACATGGCGCGCGTATTATTCCAGCGGGG
CGGATCACCCGCTGAGCGCGGCTACGTCGGCCGTGCTTGGCGTCTCAGATGATCAACAGC
CTCAGCCGCTTGTCGCTGATTATTACAAGCTTCCTCCACTCGGACAAGATACCCATCTGC
ATCTCCACAAGGATGCTAAACTTGTTGATGTCTGGCCGGCCGGCGCAGCACTAAAGGCAG
CCAATGGCGCGCACGGGGCGGAGTTGGGCGAACTCTCGGGCCTGCTCCACGCGGGCCTCG
TGAAGCGCGAGCCCGAGGACCTGAGCCGCAAGGTGGTCGACGAGCCCGAGCCGCACGCGC
TCAAGCCGCCTCGACATAAGGTGGTGGTCGGCGAGCCTGGTGAAGCGGCGTCGCCGTCCC
CGGTGCCATCGCGAGCTTCTTCAGCAGGTTCACTACTTCCGGACGCAACGATGTATACCA
CCCAAATGTTTGCTCCACCGGGCACACCTAGTCCCACCCCCTATGGCGATCAATATTCAA
GACAGCCTTCGACTTTTGCGGGTGAACCTTACTACAGAGAATATTTTGTCGGAGAAGGCT
ACCAGCAGAGAGCTGCACCACCTTATGATGGAGAACCGGCTTCAGGTTCTGCGTTTAGCG
AAAGATATGCTGCACCACGGTATCACAGCAAGAGCGTGATCGCAGCAGCCGGACTGACAG
TGGACTTGCCATCACCGGATAGTGGCATCGGTGCTGACGCAGTCACCCCTCGGGACCACA
CTGCCGTGCAGCAGTCGTTCGACTACACGGTAATCTGCCAGCAGCCCGGCGTCGGCGAGG
ACGGCCGCGGCACCCCATCGGCACATCACTCGCCCGCGCAGGCTCCACGCACGCGACCCT
GGCATGACTTTGGAAGACAGAATGACGCCGATAAAATTCAAATCGCTAAATTGTTTTCCC
CATATGGGTTCAAATACCATTTGGAAACGGCGAGCAGCAGTTCACAGCGGCGCGAAGACG
ACCGTATCACGTACATCAACAAGGGCCAGTTCTACGGGATTACACTTGAGTACATACACG
ATCCCGACAAACCACTTAAAAATCAAACTGTAAAGAGCGTTGTAATGCTGATGTTCAGAG
AAGAGAAATCACCAGAAGACGAAATCAAAGCGTGGCAATTCTGGCACGGGAGGCAGCACT
CTGTCAAACAAAGGATACTGGACGCTGACACTAAGAACAGCATCGGTTTAGCGGGTTGTA
TCGAGGAGGTCGCTCACAACGCCATCGCAGTATACTGGAATCCATTGGAGAGTGCTGCAA
AGATCAACATTGCAGTGCAATGTTTAAGTACAGACTTCAGCAGTCAAAAAGGCGTTAAGG
GTCTTCCATTACATATTCAAATTGACACTTTCGAAGACCCGCGAGACACACAAGTTTATC
ACAGGGGATATTGTCAAATTAAAGTTTTCTGTGACAAGGGCGCAGAAAGGAAAACTAGAG
ACGAAGAAAGAAGAGCAGCGAAAAGAAAGATGTCGGCCACAAACAGAAAAAAACTGGACG
AAATATACCACCCGGTGACCGAACGGAGCGAATTCTATTCGATGGCGGACTTGTCTAAGC
CACCGGTTTTGTTCAGTCCGGCGGAGGACATCGAGAAACTGACCGGAATGGACATACAGG
GCTTCTATGGACATGATGACGCATCATTAGCAGAAGCGCATCTAAAGGGTGCCTCACCCT
TCCTTCTGCACGCGGCAAAGCCTCAAGCGCCTGCGCTTAAATTCCACAATCACTTCCCAC
CGGACGCGCCAGGATACCGGGAGGTGGGTGCGTTATCTCCCTATGACCGCAAGGACTCGT
TGGAGCTAGAGGGTGTACTGGGTAAGCGGGCGCGCACGTCCACGCCGCCGCTGAGCGAGC
GCGTGATGCTATACGTGCGGCAAGACGCGGAGGACGTGTACACGCCTCTCCACGTGGTGC
CCCCCACCACGCAGGGACTCATGCATGCGATTGAGAATAAGTACAAAATTTCAAGTTCGG
CCATTAATAATCTTTATCGAAAGAACAAGAAAGGGATTACGGCCAAAATTGACGATGACA
TGCTCGCGTATTACTGCAACGAAGATCTGTTCCTGCTCGAAGTAGTGCCGGCAGGTAACA
CAGACGACGAACGGCTCTACGACATCATCTTTGTGGAACTGCCCTTAGAGCATTAGCCTT
CGCGCCGCCTTCTTCATACAATGAACACTCTCCCGACGTATTGATGCGAACTTTAGTTCA
AAAACTTTAACATTCCCCTTTAGCACTCATGCGAAAATCTATTATAATGGGATAAGTTTG
TCGATCTCAGATTGAAATTTACTTTTAAGCGATCCATCATCTTAACTTAATTTTAAATAA
CTCGACATCACAAATGTCTTCGTCATAACATTACGATAAAATGAATTGTAAATATATATA
ATTTTATAGTGCCTTATGAAATTAAGCGAGATCGAATTTGTTGGTGGTGGCAAATGAAAT
TCGTATTTGGTATCCAGAAGTTGCGTATATTGAATGATAATTATCATCTTGTAAATGATG
AATGATCCGTTGCTGAATTAAACGTGTGTGCCATTCACTCGGTTATTATATTAGATGTAA
TTTAGTTGTCCTCTCAACAGGTACCTTTTAATCTTGCCATGATGATAAGGAACTCTTGTC
ACAAATCATTAAAGCATAAAGTGCCTTTGTCATAATAATATTATATTAAATCTTTATTAT
AAGTGAGTTAAGTCATATTAAATGCCATCCACTTTGTTAAGTTTTGTAAGCTTAAGTTTG
CTTCATAAGCCCGCTCAATTTTATCATTTAGTACTTTAAAACGTACATTAGAAATTTAAG
TTGAATAATGTTCATTGCTTTTATTATTTTACATTGAAATTTTAAAAAAACCTAAATAAC
CAATCCCTGGTAATTACCACAGGACTTCTGTGGGCGTAAGGCACGCCGCACACAATTTTA
AGAATTAAAACGTTACAAAAAATGAATGGTAAAAATATGTCTTTTTTTTCTACATTGACC
TGTAAACTATGCATACAACTCACAACACACAACTCGTTTAATAGAGCAATGAACACAAAA
CACGATTTCCAGTCACATTTTTTCCACAAATACTTCATCGCATAGTCATATGTAATTAGT
CACAAAAATGGTCCATCTGAACATTATTACCCACGGGAATGGTTTGTGAATAATTTTAAG
TTTTAATCGATATTAGATTGTTATTTTAAATGATTTCGAAAAATTAGGTTATCTGGCCAT
GACAACATTTTAGTTTTATAATATTTGTGTCCAAGACTTATTTACACGTAAGGTTTCATA
TCAAACAGACATGTTTGTCTAGTTTATCTTAAGAGTAATCTACAACAAAAATATTAGTTT
CATTAGAAACACCGTAATTTGATGAATAAACACCACATCGTTTTTAAAATTGAAATATAT
AATAGAATGAAATATTTTAATATTCTTCCACCGATACTATATCAATCACACAGTTCAGTA
ATGTATTATACTCGTATTTGTCAATCTCTTCGGTCGCAGATAAACGCCAGGTGTAATCAC
AAACGTGCCTAGTGCAGACGGTTTGTTTAACTGCCATATTATGACATAGTTTAGAATACT
TAATGACTTTAGTATATAATTTTATATTAGTTTTTAATGTGACTTGAGGTATGATGCATC
GAATTTTAAAATTAAGATCATGTTATCGATATACAACGTATTTGTATGTAATGTGTTTGT
TTTGTGTTATTTTATTTGTCGCGACTCGTCTGGCGGCGTCTGTTCGTCGCCTTCGATGTC
CTTTCTTCCATTATTTGGCTCGTGTACACTTGTTAATTTGTATCCACAATTTTATATTTC
TTTAATATTATTATTATTTCTTTTACATGTATTTTATAAGCATTCGTTGCTCAAAGTCTG
CGTTAGCCACTAGTTGGGCGGACTATAACATTGTTTTACCTACTTAAACTTATTCCAATA
ATTGTATTTATTTATATACTTATCATAAATTGCAGCTTTAATGTATACTTACAATGATGT
TAGATCGTGATTCAGAATCTCGTCATAAGTCACAAATGTCAGTAGCAATAATACGTAAAT
CAGGCGTTGTGAATTAATGGCTGCGTTGCTTGTCGTGTCGCCAGCCGAGCCCCTTTAATG
GTTGTGCAATGTTTAAATGAGAGTATAATATTTGTGTAATTATTGAAATGAATACTGCAT
GTTATTGTAGGATGTTCGGTAATGTGGAGAA
(5011 bp)

- SilkBase 1999-2023 -