SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13257_c1_seq1
Scaffold_idBomo_Chr6
NCBI non-redundant
(nr)		PREDICTED:_cadherin-87A_[Bombyx_mori]
Ontology
GO:0005509 F calcium ion binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016339 P calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0044331 P cell-cell adhesion mediated by cadherin
GO:0046872 F metal ion binding
Transcript
Level		FPKM:13.16 TPM:13.23
ORF EntryO_BomoSK13369_complete:A_BomoSK_comp13257_c1_seq1
Sequence
(Nucleotide)
GGCGCGGGGCCCGCCGCCCTCAGCGACACGGCGCGCGTGGACATCACCGTGCGGAGCCTC
AACACGCACGCACCGCTGTTCGTGCAGCCCCCGCCCGGCCAGAGCACCATTGAGATACCA
GAGAACGCAGCACAAGCAGATTTCCTAATAACGACAATCAAAGCTACGGACGATGACAGC
GGAGAAAACGGACGAATCTCCTACTACCTGAAGGTTGACAATCAGAACGTTGGCGAAACC
GAAGAGTTCAGTCTGGACCGGGACACCGGTGAACTCAGGACTAAGACGTTCCTCGACCGT
GAAGAAGTCCCTGAATATCAGCTGGCGATAGCGGCTGTCGACAACGGGAGCCCGGCGCAG
TTCGAGACTCTTCGACTCCTGACCGTCGTGCTGGCTGACGAGGACGACAACACTCCTGAG
TTCTCGCAACGCAGCTACGTGTTCAACATCAAGGAGAACCTGCCTCCTAACACCATTATC
GGCACAGTGAAAGCAGTAGACAAAGACATTGGCGAAAACGGTAAAGTCTACTACCATGTC
TTAGAAGGGAAACAAGAAGGAGCTTTCGTGCTGGACAGAACTCAGGGTGTCGTCAGGGCC
AAAATTAGCTTTGACAGAGAGCAGCGCGCCGAATACTCGCTTATCGTGTACGCGAGTAAC
AACCCAATCTTAGAGCACGCAGCGGACGTGCTCAACTCAATAGACAACGGTACACAGGTC
GAGTCCGGCGTGGCGTCATTGAAAATCAACATTCTGGACGAAAACGACAACGAACCAAAA
TTTCAGAGGAACGTCTACTTCGCCGGTGTCAAACACACAGCGCGCATCAACGAGCCTATC
CTATCGGTCATCGCCGAAGACCCTGACCTGGACGAGAACGGCACCTTGCTGTATATGATA
GCCGCTTCGAACCTGTATAAATTTGGAGCTTCGGAGTCCAGTGGGAGCGTCGTACCATCA
CCGTTTAACATCAGCCAGGATGGCTTACTGATGACAGCACACTACATGTCGGAGTACAAC
CAGGATCGCTTCGTGCTGGACATCATTGCGCAAGAAGTGGCGCCGCCACGCAGACAGGCG
AAGACGCAAGTATACGTTTGGGTAATAGATCGTTCGGCTTTAATAAGGATGGTGGTGTCC
CGAAGTTGTTCCTCGTCAGTGAGCGGTGTTCAGAAGAGATTGGCTGATGCTGGAGAGGCC
CTTCTTGTGCCAGGTCGAAAACTGCCTCTCGTTCAGGCCGATAGAAGATACGACGACTGG
TGCGAAATTCACCTGCACGCAGTCGATCCAACTACGTACCAAGTGCTTCCCGTCGAGAAA
GTTCTGGAGAACATTGACTCTAAGTTCGACGAGCTGAAAGACGTTTATCATGAGTACGGG
GTCGAGACTCTCATAGCTGCCAGCGCTATATCCAAAGCACCTGATAGCTTCGATCCAGCT
TTAGCAGCTTTGATAGCATTACTGATAGTGCTATTCACTGGAATAGTTACATTTGTTGTT
GTATGCGCTTGTCTTAAGCATTGGGTAATATCACCACCATCAATGCAGTCCAGTAAAGGT
GACAGTCTTGCCCGGCGGAAAATCCTGGAGGAATTGTCCACGACTGAGAACCCTCTCTGG
CTAGAGACGAAGCTAAGGCCATACGAGGAACAAGAGTTGACCATGAATGTCTTCGGAGAC
CAGAACGAACAGGTCGTTGTGGAACCGGCGCCGACTGACAACACTTACGCAACGATACAA
GGCAGCAGGGCGGCAGAGAGATTCGGTGATTACGCTACTCTAGGAGGCGAGTCTCCAACC
CCTTTAGAGACAGCTTTAGGATTTCAGGGTAGCACCTTCAAACCACCATCTCCTGATACT
CCGGAGCCGCCTCCGCGTCCCACAGGACTAGGCGTTTTATAATGATGTATCATTAAAATT
AATATGAAAACAAAATAGGAATGTAAATAAACGAACCAATATGCATGTTGACAATGTTTT
ACAATTTACAATCAATGACGTAATATTTTAAGTAAAATATATTGAGATTATTTATATCAA
ACGCTTCCTACATAGGAAAATAATCTTTATTATTAAGAATTTAATGCTGAATTTAGTTCG
CCCGGATCTGACCTGTATTACATTGACAACGTCCATTAAAATGAATGTCGTGTAAATTTT
ATATCGGAATTGTACTTTGAATAGATTATCTGAACTACGATGCAATTAGTAAAAAAAAAA
TCGACCTTAATCATTGATGACTTAAGACTTAAATTCATTTTATGTGTCTTTCTTTTTACT
GTTCACATTAAAAAAAACAAGGCCTTTTCAATAAAGTTCTATTGATAACAGTAGAGAAAC
AAAGACGATTAATTGACAAACTGGAAAAACATTGGAAATTGTTCTTGCCTTATATGAAAA
GAAAAAATGTTTTTCAAAAAAGGTAATGTTTAAATACTCTTCAAAGTATGCCGGTAGGTA
CACCTAAGCTCTAAAATAAGTCAAATTACCGAATATAACCAGAATTATATATAGGTCACA
ACCAGAATTTTTTTAAATCGCAATATGCGGGTAGACCTTAATTCCGTAACGTTATTATAT
TTTAAAAGCAGATACTAAGCGATCAATATTGATCTTCTGTCTCTTTCTATAGGTCGACAA
GTGACAGGGACATAGTGAGTGTTAGGAAACCGCTTCCAAAAACGAAGACAGACGATAGTA
CT
(2702 bp)

- SilkBase 1999-2023 -