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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13251_c0_seq2
Scaffold_idBomo_Chr19
NCBI non-redundant
(nr)		PREDICTED:_CLIP-associating_protein_[Bombyx_mori]
Ontology
GO:0000022 P mitotic spindle elongation
GO:0000070 P mitotic sister chromatid segregation
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0000922 C spindle pole
GO:0005525 F GTP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005819 C spindle
GO:0005827 C polar microtubule
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0005876 C spindle microtubule
GO:0007049 P cell cycle
GO:0007051 P spindle organization
GO:0007052 P mitotic spindle organization
GO:0007067 P mitotic cell cycle
GO:0007275 P multicellular organism development
GO:0007282 P cystoblast division
GO:0007411 P axon guidance
GO:0008017 F microtubule binding
GO:0016325 P oocyte microtubule cytoskeleton organization
GO:0019827 P stem cell population maintenance
GO:0030154 P cell differentiation
GO:0030426 C growth cone
GO:0030723 P ovarian fusome organization
GO:0031116 P positive regulation of microtubule polymerization
GO:0032154 C cleavage furrow
GO:0035099 P hemocyte migration
GO:0035371 C microtubule plus-end
GO:0040001 P establishment of mitotic spindle localization
GO:0042995 C cell projection
GO:0045169 C fusome
GO:0045172 C germline ring canal
GO:0046580 P negative regulation of Ras protein signal transduction
GO:0046602 P regulation of mitotic centrosome separation
GO:0048477 P oogenesis
GO:0051225 P spindle assembly
GO:0051301 P cell division
GO:0051315 P attachment of mitotic spindle microtubules to kinetochore
GO:0090307 P mitotic spindle assembly
Transcript
Level		FPKM:1.11 TPM:1.12
ORF EntryO_BomoSK13329_complete:A_BomoSK_comp13251_c0_seq2
Sequence
(Nucleotide)
TTTTTTTATTAAAATCCTCGTTTTTATTCACGAATATAATCGAAAACAATTATAAACACA
AAAAAATTAGAAAATAAGAGTAATAATAGTACAAATAATACAAATGTTAATTAATAAATG
TTGTCGGTAGCGTCTCCCTCCGGTTGGAATCAACGAACGCAGCGTTGGACCTGCCGTCAT
CTTATATTTAGTATAACACAGTTTTCCTTTTATAAAGCCAATTAAATAAATTACGCTACG
CTCAGTTATGATCACTAAAGCTCACTAACGCTAAATGAATCACAAAACAAATAAGAACAT
TAATAATTATCTTTTAATAATATAAAATGCGTATTATCAAGTTTGAGAGTTTCTAACTCC
ACGTGGAATCAAACGAAACATTATTCCAACAGAATAATTGTTCCGTTAACGGCGGCGGTT
GTTGTGTTCGCACGAATACAACAAGTGTACCGGGAGGCTCGTCGGCCTCAACGCGGACCT
CAAGGATGCAGGGAGTGAGATTTAGCGGACAGCTTCGAGCGCTACAAGTCGCGGTGCAAT
GTGGATATCGAATAGTTATTCATTGGTATTTTGTAAAGCACTCCCAGGACCGAGCGCCCC
CGGACTACGCCACCAGAAAGAGACGAGAAGAGTTTAATCTCAAATAAAATCGCGTAGAAT
GTCTGTAGTTAGTACAAGACCCCGTGGAGGCGGCGCGGGGGGTTGGGGGGGCGTGCTGGA
AGCGAGCGTGTCCGTATCTCGTTAGTAACGTTAGGATGCGTGCAGCATCCCGCCGGCGCG
CTGCGAGTCGCCTGTTTGAAGCAGACGACTCACGTTGTCCCAATTTAGTGTACGCTCTAA
GTGGCGGCTGTATCCCGATAATCTAGTCAGAGCGCGGTCGGCCCCAGGTTCCCTGCCCCT
TGGGGAGGTCCGCTGGGGTTCGTTGGCCGCGTCGACTCCTCAACTGTTTGTAGGGTTACG
TCACGAACACCTCAATAGTTCCGTGTCGCGACAGCAGCAGATGCGCGACGAGTCAATATC
GAAGGGGTCCCCGGGCGCTCCGACCGCGGACGCAGCGTTACAGACGCGTTACTTGTGTTG
AGTTTGTTTATATTATACAATTTATATATACATTAAATGTTGTTAAATCTTTAATAAAAC
GAAACAATCAATTTGATTTTTTTTTGTTAAATTTAATTAGACACAAGACGAGCAACGCGT
CCGCGCCGGTGTGCGGGCGGGGGGTGGCGGGAGTGGCGCCGCCCCTACCGTCAGCAGCTC
AGGAGGTTCGCGGTGCTCTGTGGAAGGCCGCGGCTCCACAGTGCAGATGTGGTGCTCCAG
TCGAGATGCTCTGTCCAGTTGTTGTATATGACTGACATATGTATGAGGCCGGGGGCGCCA
CATCCGAGCGGCGGCGCGTGCTGCCGTCCCCCTCTCGCTGCAGAGGAGCGGCAGCCGAGC
GAGAGAGATGGCAGCACCGGTCGGCGAGCGCGTGTTACGTCTGCGTGGCGCGCGTGCGAG
TGCGCCGCGTCCTCCGCTACGTCGTTGTCGCGCTGTTGGCGTGTTGTTGTCGGGTGGACT
CCTCGCGCTGCTTGCTGATGTACACCTGCAAGAGGCGGTACTTGCTGACGGAGAGGTGCG
TGAGGTGCGGCTGCATGCGCGCCTCGCCCAGCGCGAACGTGAAGGCCACCATGCAGAACA
CGGCCGCCTTGCGCACCGCGGAGTTCTGGTGGTCCGCCAGCTGGCTGACCCCCTCCATGA
GTTGCTGCACGATGTCGTCGGTGAGCTCGTGGGGGCGCGCCTTGGCGACCTCTCCGGCGA
GCTTGAGGGCGCACAGGGAGGTCGGGTAGCCACGCGTGCGGATCACTGGCTTCAGCAGGG
CGAGCACCTGCAGCGCGGGCAGCGCCCTAGCGATGTGCGGCATGCCGGCCTCCACCGCCC
GCATCACCTCCTTGTTCAGAGACTCGTAGGCCTGGATGAGCTTCAGTAGGATGAGATCGA
AGTACTCTTGCCACTGGGGTCTGGTCTCTGGCCTGCGGCACAACCAGATCAGAACCTTTA
CGGCTTCGGCGGCTGCTCGCTCGTTCGCCGTCCCCCAGCCGGATGTCTGGTGCGCGTTGG
TCGCGTTTTCAGTGTTCTCCTTGTCCCCGGAGTTGTCCTCGATGGAGAGCGCCGCCAGCG
CTACACGAACTATGTTCTTGAAGTATTCCTTGGGCTTGGAGCAGTCCCCGTACTTGAGCA
GCTCGTGCGCGGCCAGCAGCAGCTGCTCCCAGCGCTCGGGCGGTGACGTCACGGCGTCCA
GCGCACACAGAGCCTCCAGCACCGCCTCCTCGCCCAATCCACATTTAGTGATGATGTATC
CGTGCTCGTCCACCTCGTAGGGCCTGGCCTTGTCGCGTCCCAGCTGACTGCCGGTGTAGT
CCCCGTGTTGCAGTTGGTAGTCGAGCCGGTTGTGTCCCGGGATGGGCGACGATTCTTTAG
TGCTGTTCGCCTCTTCGGAACTGTCTGCTGAAGCGGCACGTCCTATTGCCTCTGCATGAC
CATTAGGCACTCCGTTGTGCCCCTTGTTCCCCAGCGTGAGGTCCGACATCTGACTGATAC
CGGAGTCTTTACTCGATGTGTAGTTGCCGCACTCCGCGTTAGAATGGTGCGCGGTGTAGG
AGTGTATCTCCGACGTCGTTTTCCTGATGCGGGAGAGGACGTCCTCGTTGTTGGACGCGG
AGCTTGCCGTGCGCAGCGGACTGTCGCTGCCGGCTGGAACGGGCGGACATTAGCTCGCCG
ATACGTCATCAGAACTGGGTATTTATTCCCATCTAGAACCAGAGGTTGTAAAGACCATAT
CGAGCTCTGGTATGTTTTGGTCCCCTGTGCCGATAGCCTTGAGAGGCTATTTCAACTTCA
CCCTAGCGGGTAAGTGAGCTCTCGGGGCTCAAACCGGCGGTGTTGCAACTTATTTAAATC
AATGGTTGCAACACATAATGTTTTAAAACCTAAAAATTCCGATCACATTCAATTTTGTGT
TATATTCATACAATTTTACTCACCGATAGGTTCGTAGCCGTTTCCTGTAAAAAAAAAAAC
ACAAATCAATATCAATGCTAAGTTATACGAAGAGGCAATTTGATGGGACTGTTAAAGCTA
ACTTATTGTGCTACCTTGCAGTTGCAATAAAGTAATCATGCGTTCCGTGTTATTAAACAG
AATAATAATGCAATAGAGATTTTGAAGGTGGACGGACGGCCCGTGATTAGAGATGATCGA
CATTCATAAAAAAACTTACCAAAGTATTTTCAATGCTCTAGAAAGAGTATTAAAAATAGT
TTATACTCTATATATATATTTTATTTTTATACTCTAGAATCTAGATAGAATATTGAAAAT
ACTTTAGAAAAAAACAAAATTAAGTCACGTAAGACAGTGTTTAATTGTTATTTGAATTAA
TCTAAAATATTATTTTATATAATATAGGACTTTTTTTTTTTAATTCGCGAGCGATCTCAA
CTAACGTGTGTACCATTCCATATTATTATATTATGCACCTTTATAAACAATTGAAGAGGC
TTATTCCAACTTTCTTGTTTTTGATGAATTGTAATTTTTTAGATTTTAATATTTGAAGGT
ATGTGCTTGATTTAAAAGAGACGAAAAGAGCACGTTTTTCCTTTTCTGATTTAAAAGAGA
TTGTTTAGTTTTATAAATTTTTAGAAGACATGTTTATAAGTCGTTCGTAATAAAAAATTC
AATTTCTTAACAATTTTAGTTAAGCCACTTTAATTCTAAAGGTGCGATATGTGCTTAGCG
ATGATCACAGCTATGCGTTTCACTAGTAGATTTAAAGTGTGGGTCAAGTTATTTCACAAA
TAGGGTATGCAATGCGAACCAGTCTTAGAATAACAGTGATTTTAAGGTACATATTATGTA
CTTTACCTACCTACGAAAAATTATTCAATTAATTGAAAATTTTCAACACTTGAATTTTTT
TTACATTATTGAAAACTTACCATTGAAACTAATATTGGATTTTTTTCATGGTTCCCTATT
ATGCTCCCTAAAATAAATCACATACAAAGCAAACAAAATCCCATACTAAGAACACGAAGA
TTATATATAATAGTGACAATTTTTAAGTGACAAATCTCCAAATTTTTAAAAAAAACTGAA
TTTGCGCGTATTTAAGAGAGTATTTATGAATAAAAAATTGGGCGTTCTACGAATTTGTGT
ATGTTTAGAGTTTCTGGAATAACGACTAAAGATTTAAGAATTTATTTAATGTTCTACGAC
TCCTACATCTAAAATCTCTTAAATTATACTATCAAGTTCGCTAAGGACATTTTCAGTTGG
TGAGTCACAAGTCGTAAACAAATATGTGATTATATTATATTTTCAACTACAACTCACCTA
CAGTAGGCTGGGCAAAGAAT
(4400 bp)

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