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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13233_c0_seq3
Scaffold_idBomo_Chr16
NCBI non-redundant
(nr)		PREDICTED:_protein_suppressor_of_white_apricot_[Bombyx_mori]
Ontology
GO:0000395 P mRNA 5'-splice site recognition
GO:0000398 P mRNA splicing, via spliceosome
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
Transcript
Level		FPKM:4.44 TPM:4.47
ORF EntryO_BomoSK13237_complete:A_BomoSK_comp13233_c0_seq3
Sequence
(Nucleotide)
GCTCAATGACGGTATGACAGCGTTGTGTCCATTATTGTTGAAATGCTCACGGAAAATTAT
CAAAAATGGCATCAAAATGGACTAGACGTCGTAGTGAAGCCGGTATATTAAGAAAGAATG
AAATCAATGAGAAAAAAGAAGAGTTACTCGTGTTCGGCTATTCATGCAAAATATTCAGGG
ACGATGACAAAGCTTTGTTCATTGATCAAGGGAAACACCTCATTCCGTGGATGGGGGATG
AAACGTTGAAAATCGACAGGTATGATGCAAGAGGAGCCCTACACGATGTGTCAGCATTGG
AAGCCCCGCCGGGAGGATACGACTGGCGGGTGGAGTTAACAAAATCTGAGCTTGATGTGG
AGCAACTATGCGATGATGAACGTTACCGAGCTCTATACACAAATGAAGATGAAGAAGAAA
TGTACAAAGAGGAAGAACTGAAGCGTCTCCATGCGGCTGGTTACGGACAAGTTGGTTTCA
ATTATGATACATTAGCTCCACCTAAGCCACCCGCGAAGCCAGTTGAGGTAGATGAACCAT
TTGTTCCGTCTTCAACTCTTGAAACTCTGCTACCTGAAGATGTTGTTTTACCTGAGACAC
AAAAACTGAATGCCATCATAGAGAAGACAGCCAACTTTATAGCAAGTCAGGGTGTCCAGA
TGGAGATCCTCATCAAAGCCAAGCAGGGTGACAATCCTCAGTTCCAGTTCCTCAACAAAG
ACTCCCCTTTGCACCCATATTATAGTGCGCTCATCGCACTCATCAAAGCCGGTAAATGGC
CTGAGAAGAAAGTCGATTCTGTTGAAGAACGACCACCTGACAATGATGAATATCTCCATC
CAAGCTTAGCATCAACCATAATTGAATCTGCTCCATCGATTCCGAGCATCCAATACAAGC
CATCAGCGGACTGCGACTACACGATGCTGGTGTCCAGCCTGGTGGGGCCGCCGCCCGAGG
AGCCTTGTCCCGGGGAGGAGCCCCCGCCTGGGACCGAAGTTTCCGCTCCGCATCCCCACA
TTTCCAAGGAACCCGTCATGTATAACACGCAAGGAACATCGGATCCAAGGCTACAAGCAG
CACAGACAACGTACTACCAGCAGTACGCAGCGTACTACCACCAGTACATGGCGCAGGCTG
AAGCACAAGCACGTGCGGAACAAAAAAAAGAAATCACCGTAACCAAATCTACTGGACTTA
GTCTCATGAAGAACTATAACTCTGATTCCGGGTCCGACGATACTGATTCCGAAGATTCTT
CGTCATCGGACAGTAAAGATCAAATAATATTGACGCCCCCGGAAGACGTTCAGACGGTGA
TCGACAAGATGGCCGCCTACGTTGCACGAAATGGCGACGAGTTCGCCGACATAGTGCGTT
CGAAAAACGATCCCAGGTTCACGTTTCTGGAGCCCGATCACGAATATCATCCGTATTATA
AAAGATTACTGCAGCAGAAGAAAGGCGTCGACGTGAATGGAAAGAAAAAGGACAAGAAGA
ATTCTTTGCCTGTTTCTTTTTCTATAAAGAAATTGAAAGAGCCCGATCCTATTTTGCCGA
AACCGGCTCTGCCTTACGAGTCGAGTACGGACGACGAGAACGAGGAGAAGCAAACGGAAA
ATCAGGAACACATTGAGCCAAAGGACCACACCAAATTAGTCGCTCAGACCCCAAGTGTGC
TTCCGCCCATAGTAGTGTACAAGATGGACGGGTTGATCCACGATTTCCCCGTCGTCAGAA
CGATCGAGCCGGTCAAGCCGACATCCCAAACAAGCCCACCGAAGCTCACGCCAGTTATAC
ACGAAGTAAAAGAAATACCTAAAATAGATCCTCCCGGTCTCGTAGAGAAGCCACAACTCG
TCGGACCGGTAACTAATACTTATGTCAAGGAAAACACGCATAAAACAAGAGAAGATAACT
CGGAACGTAGAAAAGAGAGAAAGAAAGATCGCAAGAAAGAATACAAATCGAAATCTAGGA
GTAGAAGTAAGAGAAGAAGTCCGGTGAGGAATTCCGTGAAAGAAAAAAAACGGGAAAAAG
ATGAGAAAGTTAGTAGTAGTAAGAAGAGTGAACCAGTCAAGGAAAACTTTCCGACCGAAA
TTATTTCGCTAGAAGACAACGGAGATGATTTGATTGATCTCACCGGCGATCAGTCCGACA
GTAAACTGGAGGGCGAGGCGGAGCACGGGCGGGAGAGGCAGCGGGAGCGGCGGCGGCGCG
CGGCCGAGTTCCTCAAGAAGGTGGGCGTGGACCCCGGGGCCGCCGCGCTGCCCACCTCCT
CGCTGGCCAGCGCCATGGTTGATACGTTGGAGTCTTTGAAACGTAAGAAAGCGGAAGAAG
AAGAAAAAAGACGGAGAAGAGAAAAGAGAAGACATCGAGAAAAATATTACGACGATGAGT
CTCAAAAAATGCATCATAAAAGCAAAAGAAGAAGGCGCAGATCGTCTGAAAGCGAAGACG
CCGATAATGATGGCTCGAAAAATAAGAAGCGCAAGAAGGAAAAGAAACACGCCTCGAAAA
GCAAGAAGAAGAGAAGAAAAGAGGACGAAGACAGTGAGCAGAGGTTGCCGGACATTGACC
TCACGCACACCCTCAAGGAGCTGCGGACCAACTCTCCGACCAAAGACTTGGTGCTTCAGA
ACTTGGAAGTTAACACGACCGCCAGACGGAACTCCGACGAGGACGTAGCTAAGAATAGAA
AGAGAAAGAAAGACAGAGAGTACAGCGAGGGCGAGTGGTCTAGCGATAGTGAGGAAGATT
CAAAGTCTTCGGAGAGTCAGCACGGATAATATTAAGTTTTATTTTTTTGTATCCGTTGAA
GATAGCAATGATTGTCGTTGTATGGACATTATTATTAGCTCTGTGAGTTTAGAAGCAACG
ATTCGCTTAGTTACTAGGCAGTGTGATTGTTGAAAATGATAATATCAAGAGATAAAAGGG
TTAATTGGTTTAATAAGCTTAATACGCGACCATTTATTTTTGTAATTAAAATTTTGTTTT
ATTTGATACTAACGACCAGCACTCGCTTCGCTTCGGAAACATTAA
(3045 bp)

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