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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13233_c0_seq1
Scaffold_idBomo_Chr16
NCBI non-redundant
(nr)		PREDICTED:_protein_suppressor_of_white_apricot_[Bombyx_mori]
Ontology
GO:0000395 P mRNA 5'-splice site recognition
GO:0000398 P mRNA splicing, via spliceosome
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
Transcript
Level		FPKM:3.12 TPM:3.14
ORF EntryO_BomoSK13233_complete:A_BomoSK_comp13233_c0_seq1
Sequence
(Nucleotide)
GCTCAATGACGGTATGACAGCGTTGTGTCCATTATTGTTGAAATGCTCACGGAAAATTAT
CAAAAATGGCATCAAAATGGACTAGACGTCGTAGTGAAGCCGGTATATTAAGAAAGAATG
AAATCAATGAGAAAAAAGAAGAGTTACTCGTGTTCGGCTATTCATGCAAAATATTCAGGG
ACGATGACAAAGCTTTGTTCATTGATCAAGGGAAACACCTCATTCCGTGGATGGGGGATG
AAACGTTGAAAATCGACAGGTTCGATCCGTTTTTTACTATCAGACTGCTAACTGTGGTGC
TAAAACCATAAAAAACGATAATAATTTGTCAGAATGTAATAAAATTTTGGAAGACTTATA
AGATTTTCGCAGAGGATGATGAGTAAAGCCTACAGCGGGACGGGACTTAGACAGGGGCGC
GGGCCCGTCGTGGTGACGTCTTTTCTTATGGTGACACTCTCCGGTGGTATGTATAACTTA
CAACGGAATAATTGAGTATGTATAAAAATGTAATCTAATTGTTTCACATGCGAATGATGT
TACCATAGTTTATTATTAAAATTTTGATTATGGTTACGTTGTATATGCTGTTTATAGTAT
TAAAAACGAAGTGTATTTAGTATAAATCTACAGTTGAAATAATTTATGTAATTTACCGGT
AACAATGAAACTTCCAATGGATGTACTGAAAGCTAAAATGTCATTCAACATAGGAAATAA
AAATTGGAAATTATATTAAAAACCTCACATTATTTGCAGGTCTAATGACAAGATAGTTCA
TGGATTATCATGCTATTTATGTGAACAGGTATGATGCAAGAGGAGCCCTACACGATGTGT
CAGCATTGGAAGCCCCGCCGGGAGGATACGACTGGCGGGTGGAGTTAACAAAATCTGAGC
TTGATGTGGAGCAACTATGCGATGATGAACGTTACCGAGCTCTATACACAAATGAAGATG
AAGAAGAAATGTACAAAGAGGAAGAACTGAAGCGTCTCCATGCGGCTGGTTACGGACAAG
TTGGTTTCAATTATGATACATTAGCTCCACCTAAGCCACCCGCGAAGCCAGTTGAGGTAG
ATGAACCATTTGTTCCGTCTTCAACTCTTGAAACTCTGCTACCTGAAGATGTTGTTTTAC
CTGAGACACAAAAACTGAATGCCATCATAGAGAAGACAGCCAACTTTATAGCAAGTCAGG
GTGTCCAGATGGAGATCCTCATCAAAGCCAAGCAGGGTGACAATCCTCAGTTCCAGTTCC
TCAACAAAGACTCCCCTTTGCACCCATATTATAGTGCGCTCATCGCACTCATCAAAGCCG
GTAAATGGCCTGAGAAGAAAGTCGATTCTGTTGAAGAACGACCACCTGACAATGATGAAT
ATCTCCATCCAAGCTTAGCATCAACCATAATTGAATCTGCTCCATCGATTCCGAGCATCC
AATACAAGCCATCAGCGGACTGCGACTACACGATGCTGGTGTCCAGCCTGGTGGGGCCGC
CGCCCGAGGAGCCTTGTCCCGGGGAGGAGCCCCCGCCTGGGACCGAAGTTTCCGCTCCGC
ATCCCCACATTTCCAAGGAACCCGTCATGTATAACACGCAAGGAACATCGGATCCAAGGC
TACAAGCAGCACAGACAACGTACTACCAGCAGTACGCAGCGTACTACCACCAGTACATGG
CGCAGGCTGAAGCACAAGCACGTGCGGAACAAAAAAAAGAAATCACCGTAACCAAATCTA
CTGGACTTAGTCTCATGAAGAACTATAACTCTGATTCCGGGTCCGACGATACTGATTCCG
AAGATTCTTCGTCATCGGACAGTAAAGATCAAATAATATTGACGCCCCCGGAAGACGTTC
AGACGGTGATCGACAAGATGGCCGCCTACGTTGCACGAAATGGCGACGAGTTCGCCGACA
TAGTGCGTTCGAAAAACGATCCCAGGTTCACGTTTCTGGAGCCCGATCACGAATATCATC
CGTATTATAAAAGATTACTGCAGCAGAAGAAAGGCGTCGACGTGAATGGAAAGAAAAAGG
ACAAGAAGAATTCTTTGCCTGTTTCTTTTTCTATAAAGAAATTGAAAGAGCCCGATCCTA
TTTTGCCGAAACCGGCTCTGCCTTACGAGTCGAGTACGGACGACGAGAACGAGGAGAAGC
AAACGGAAAATCAGGAACACATTGAGCCAAAGGACCACACCAAATTAGTCGCTCAGACCC
CAAGTGTGCTTCCGCCCATAGTAGTGTACAAGATGGACGGGTTGATCCACGATTTCCCCG
TCGTCAGAACGATCGAGCCGGTCAAGCCGACATCCCAAACAAGCCCACCGAAGCTCACGC
CAGTTATACACGAAGTAAAAGAAATACCTAAAATAGATCCTCCCGGTCTCGTAGAGAAGC
CACAACTCGTCGGACCGGTAACTAATACTTATGTCAAGGAAAACACGCATAAAACAAGAG
AAGATAACTCGGAACGTAGAAAAGAGAGAAAGAAAGATCGCAAGAAAGAATACAAATCGA
AATCTAGGAGTAGAAGTAAGAGAAGAAGTCCGGTGAGGAATTCCGTGAAAGAAAAAAAAC
GGGAAAAAGATGAGAAAGTTAGTAGTAGTAAGAAGAGTGAACCAGTCAAGGAAAACTTTC
CGACCGAAATTATTTCGCTAGAAGACAACGGAGATGATTTGATTGATCTCACCGGCGATC
AGTCCGACAGTAAACTGGAGGGCGAGGCGGAGCACGGGCGGGAGAGGCAGCGGGAGCGGC
GGCGGCGCGCGGCCGAGTTCCTCAAGAAGGTGGGCGTGGACCCCGGGGCCGCCGCGCTGC
CCACCTCCTCGCTGGCCAGCGCCATGGTTGATACGTTGGAGTCTTTGAAACGTAAGAAAG
CGGAAGAAGAAGAAAAAAGACGGAGAAGAGAAAAGAGAAGACATCGAGAAAAATATTACG
ACGATGAGTCTCAAAAAATGCATCATAAAAGCAAAAGAAGAAGGCGCAGATCGTCTGAAA
GCGAAGACGCCGATAATGATGGCTCGAAAAATAAGAAGCGCAAGAAGGAAAAGAAACACG
CCTCGAAAAGCAAGAAGAAGAGAAGAAAAGAGGACGAAGACAGTGAGCAGAGGTTGCCGG
ACATTGACCTCACGCACACCCTCAAGGAGCTGCGGACCAACTCTCCGACCAAAGACTTGG
TGCTTCAGAACTTGGAAGTTAACACGACCGCCAGACGGAACTCCGACGAGGACGTAGCTA
AGAATAGAAAGAGAAAGAAAGACAGAGAGTACAGCGAGGGCGAGTGGTCTAGCGATAGTG
AGGAAGATTCAAAGTCTTCGGAGAGTCAGCACGGATAATATTAAGTTTTATTTTTTTGTA
TCCGTTGAAGATAGCAATGATTGTCGTTGTATGGACATTATTATTAGCTCTGTGAGTTTA
GAAGCAACGATTCGCTTAGTTACTAGGCAGTGTGATTGTTGAAAATGATAATATCAAGAG
ATAAAAGGGTTAATTGGTTTAATAAGCTTAATACGCGACCATTTATTTTTGTAATTAAAA
TTTTGTTTTATTTGATACTAACGACCAGCACTCGCTTCGCTTCGGAAACATTAA
(3594 bp)

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