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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13222_c0_seq3
Scaffold_idBomo_Scaf102
NCBI non-redundant
(nr)		putative_ubiquitin_specific_protease_[Danaus_plexippus]
Ontology
GO:0001501 P skeletal system development
GO:0004197 F cysteine-type endopeptidase activity
GO:0004843 F thiol-dependent deubiquitinase
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006281 P DNA repair
GO:0006282 P regulation of DNA repair
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0009411 P response to UV
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0035520 P monoubiquitinated protein deubiquitination
GO:0036297 P interstrand cross-link repair
GO:0036459 F thiol-dependent deubiquitinase
GO:0042769 P obsolete DNA damage response, detection of DNA damage
Transcript
Level		FPKM:0.89 TPM:0.90
ORF EntryO_BomoSK13178_complete:A_BomoSK_comp13222_c0_seq3
Sequence
(Nucleotide)
GATTAATATAACATTTTTTGAATATTAAAAAAAAAGTCAAAATATAGCTACTGACAAGAT
TTTTTCACCTTTTACAAAGGTTTTGGAATGGCATCCGCAAAATAAAACAAAAAATTGGGT
AATTTTACATTCGCATTCGTTTATATGAATTTTTACGAAACAAGGAACATTTCAACTTTT
GGAACATAATTTTACAACCAAATTAAGCATTTATATGAAATATGGAAAATAATGAAAGGA
TAAACAAAACCATTTCAGTTTTCCTTTAAATAAAACAATAAGACAAAATCATTACGTCGA
CCCGTTTCCTTCTCAGAAAACTTAGTTTATGTCAAAATAGTTTTAATGAAAATAAAACTA
TACTTAATTATTCTTTTGTAGTTTTCCATTAAAGTAACTTTATCGTCTTCCACTCACGGA
TGAGTATTATAAACAGGCTGCGGACCGTGAGCACTGATGATCAAACCAAACTCACATCTT
GATTTAGCTTACTTTATTCCAATATAAATTTTGGTTTTTATAGTGAATTTTCAAAAACAA
GAAATTAAATACATTTAACATTTATAAATTTTATATAAAAAGTAAAGCTTATTTTAATTA
CATTCAGCTGACAATTTACATTTGTTTTGTAATAATAATAATGATATAATATTTTACATT
AAGCAAGAATGACAACCAGTACCATTTTCTCTGAAATGTACGAGTTCTTAGGACAGTTTA
TTACAAAATTAATATAATTATATAGGTAGGTATTTGACAAAGTTTATCAAAGGATAATCT
TGAAATTACATAAATTACATCAATACTTATTTTTTGAGGTTAAATTACATGATTATTGTT
TTAAATAGGTATTATATTTTTGTTATATTATATTAACACAAATAAACTAATGTGCGTTGT
ATAATAAATGTTTATAAAAATTACGAAACCTTAGCATATCTTCATAAAAAACGTGAGGTT
GAATTTATTGATGGAAATTTGTGCTTGTCGACGACCATATTGAAATGTCGCTTTTTCGCA
ATATTTACTATAAACATATCAAACACCGTAATGTATCAAGATTGTTGTGTTTCCTAAGAG
AATTTTCTCTTTTGATCTCTGGTTTCTTTTATGACATTAAACAAGATTGTTATCTTGTCT
ATGACTTAAGAAAAGAATTTGTTTTTGAAAAACGAAACGAAATGAGGTAGGTATGTAACT
GGTACATACTAGATGCTGGGGCACATTATGTTCTGCGGTTAAGTTTCCTGGAATTTATAC
ATATTTTGATGAATGTATCATAAAACATCAGAATTAATAGTAAGCCACAACCTATTAAGG
CTTGTCATCCATAATTCATGTTTAACAGTAGTCTAAATAATATCAGCAGTTTATAAATTG
TTTTAGTAGAACTGCTTACAATTCTGAAATACGGCACCATTAATCAATTAGAAGTGCAAA
CAAAAGCTAGTTTCCATTAGATGTGTTTGCTTATAATTTGTTTACAAAATTAACAAATAA
TTTAGGCCATTCATACATTTTAAAAATAGAAATTAAGTAGAAAAGTACAGAGCACTATTC
AAATTAAGATAATGGGAATTAATGCAAATTGTACTTTATCTATTCATTTGTCGTGACATT
TTTTCTTCCTTGGATATTGTTGCCACAATCTATTCTGTATTTCATCTTAATATCAATAAG
TGTAGTCAACTGAGGGATTTAATTTTGTAAATTTTATGTGAATGCTACAATTAATATAGA
TATGGTAGTGGCTCAATGCAGTTGTTTATAAAGATCTAGCATTCATAGAATTTTACCAGT
TGAATGAACTAATAGTTTAATCTGTTTAGAAGAAAAGTATGGAACCAACATATTATGAAG
TTTATAAAAAAAAGGGCAATGTTAAGTTGTCACCGGTGTAGTGTGTATTGCATTAATTTC
CATTTTGTTACAGGGGTTGTTTACAAACTATTAAAAATACATATTTTGTCAGTTTGTAAC
AAGTGTGTGAACAAAATAATATTAAATTGTCTATTTATCTAACTAATAGCATTAGCTCGC
TACAATCTTAATATCACTTCAGGCAAACAATAATAGTCTGTGCCTATCTTGTCTGTTACA
TGTCTTTTAAGCAGCTACAATTACAATGATCATGGCGCCCAATGAAAATAGGCATTTTTA
GAGATATAAAAAAAAAAAATGTTTTTGATAAATACTGTGAATGTTTATGCGAGGTCTTTA
GACACTTTCTGCCTTATTCCAAAGGATTCCATAATAGTAATTTAGTTTTATTTCTTCAGT
GAATTCGTTTCGCGATTTGGAGCCTCTAGAACGCATGAGGGAAAAAATAAGATTGCATTT
TTGATTGAAACAAATACTTACAAAAATATGGAGGTCTTACCAAAAATGTATTCAAAATGT
TCTGAAATTATTGTCGAATCAAATCCACGTTAGAGTGCTCCTTCCTCGCAACCACAGTGG
ACATTCACCGTGAACACTGGGACACAGCATGGCTGCAACTAGCCCACTTCACTTTTCACA
TAAAACAGGAGATAGGGAGTTGCGGCAGATCTCATTTTCGGTTCAGCCGACAAGAGATCT
TCGAATTCCTCATTCGATATGGGTTTAACAAGTTCATCGTCACATGCGAGCCAGCATGGT
TCTGTTCTAGGTCTTGGGACGCAACATTCCTTAGCTGCACAGCCAGTGGGCGGGTGGCGA
GGTCGGTTGAAGAGCGTCCTCATGAAAGAAGACGAGGAGGTTGTGGTGGCATCACCGCTA
CCTTCACGAGAGCACTTGAAGTCACAAGAACTATCGCGCGCATAAGCAACGTAATGCCCG
CCTGTTAGGGTCTGACCGAGGTGCATTATCACTGCCCATAGGATGTATCTGTGCTGTGGT
GCACGCTCGGGCGGTCTGGAAGCGCAAGGCTCACAGAAACAAGGCATAAGTAGAGGCGTC
GGTGCATGTCTTGTTATCTTTTCCATTCCCCCGCTGAATCGTTTCAACTGTAGTACCAGC
AACCGCGGCAGTCTCGAATAAGTGACGCTGCGACGAGCTTCGTTGTACCGTAGACAACGT
TCGCACCAATACTTGTTCTGATCACGCAGGTATTCTGTAGACAGGCAGGCCGCCCGGAAC
GGTTCCGCTCCTGGTTCTTCTTCGCCAACCGGAACGCACAACTCACAAACAGCCTGCGCC
TTCTGAGTGACCGCTTCACATTCTAAGCACATGGTCCGCACTACCATCGTACCTGGAAGA
CAGATTATATTAGAACTAGAGGTCCTGCAGTAGTCGAAATTCGACTATA
(3289 bp)

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