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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13221_c0_seq4
Scaffold_idBomo_Chr7
NCBI non-redundant
(nr)		PREDICTED:_postreplication_repair_E3_ubiquitin-protein_ligase_RAD18-like_isoform_X1_[Bombyx_mori]
Ontology
GO:0000209 P protein polyubiquitination
GO:0004842 F ubiquitin-protein transferase activity
GO:0005575 C cellular_component
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
GO:0051865 P protein autoubiquitination
GO:0061630 F ubiquitin protein ligase activity
Transcript
Level		FPKM:0.47 TPM:0.48
ORF EntryO_BomoSK13173_complete:A_BomoSK_comp13221_c0_seq4
Sequence
(Nucleotide)
CGCGTTCCCGCCAAAAAGTCCGCGGGTTTTGCTTTTCCACTTGAATGTTGCCAATTTTCG
CTGATGAGGTACCTACAGGATTTAGGGGATTCAGACGTTCGCCAAATGTATTCGTATCAT
TAACGTCACTTTTTATCAAGGAATTCGGCTTATCAATAATTTCAATTAATTAGCTTCGAA
TGAATCAATGATACGAACCAGTGCGCTAACGTCAGTAAAGTAGCCAGATGATCTCACACC
ACACGAGTCTGTTCGGCTATTAATTAGAACCTAGACATACGTGGAAAGCAGAATATGTCT
CGCCGGTTGGTAAATGACCACAGTCGTCCATGGACATCAGCAATTCCAAACCACAAAGAA
GCCACTGCCTGTCGTTGGGTCTTCGTGTCCCCTTGCACGGGGCACGGGTCGGGCTTCAGA
GCAGTCTCCTCTGCCCGGGCTTGAACTCCTTGCTTAACGAGGCAGGACTGATGATTATGC
TTGTTGGTCATTTTCTTGAGCCAATGAAATGATATGGTTGAAGCGATGGTTAAGATGTGA
TGAGGTAATGAGACATTCAAATGATTGGTGATGAGTTGGATTTATGAGATGAGTGACGAT
GATGATCTGTATGGTTCTGATCATAATATAATATAATGGTGGGTCCATTCCCAGGAGGTG
AGGGAGGGATGGTCGTCCCCTCCAGATCTTCTCTTCTTTCTTCATACCACTGCCACTGGA
TGTAGCCTGGCATGTTCTAAATGAACACCCCTGCAGCAATCTGCTTTCGGCGTGTGACGT
ATGCTTTGAGCAAACCCCTGAAACTCTCGATGACGATCCGTAAATTTTTCGTCATAGACT
GACCGATTTTTACTTTAGTTCCAATATTTAAGTTACTTCTGCTTAAAGTTTTTATATTCG
TTTTAAAATTGGCCACTGCTATTCGATGGGGTCCCATCGCTCCCTCGTGGGAACCATTGG
CCCTCCCGTATTCGGTGATTACATCGGAGAGTTTTTCTATAATACGAAGTACATCTTCTA
TTAGAGACTGATTCCATGTTTTTGCATCCGTGTATCTTGCTAGCATTTCGTTGCGACTCT
TATTATTTTTAATTTCTATTATTTTCTTTTCATACATATTCGATTCCTCCCGTAACATTT
TTGAGGCCTTACTTTGTTTCTCCGCATCACGTTTCAACATTTTACATTTCGTTTTTATAA
GTTTTAATTCTCTTTTACTTTTATCGATTTCGGAGATCGCCTGTTTCAGTTTGGAGACCG
CTTCTGGTTCTCCCTCGTAGTTGAATGTTAAATGCACGCGTATTATGGATGTTTTATCAC
AATCGTGGCGGCATTGGGGACAGGTCGTAGAGCTGTTCAGCCATTTGTGTATGCAATTAC
TGTGGAACAAATGACCGCATGTTGTTGAAAGAATGGTTTCCCATTGCTTCATATTTTCGT
GACAAACTGAACAAGCAGGTAGCAGCATATTCTTGTCGTCTTTTATGCTGGCCTTATAAG
TGTGAAATTTTCATTTTAATTTTCTTGAAGCAAGCTGCCAATTCCTTCAATGACCGGCCG
TAAATTATTGGTCAAAGAATTACACGTCTTGATCAGAGCTGAAGCCCCTAAGTTTCGACT
CTTTAACGTTCGCACGTTCGCTTTAAGCTCAGCCATTCTTCTTTGATAGCATCTAGCTTT
TTGTTCATTTGAACTATTCATCCTTCCATATTCGGTGAGCATGGTCGATAGTGTTTCCAC
CACAAGCTCTACATCTTCAATTCGATCCGCATTAAATTCTTTTAATTCTGTATATAGATC
TTGCATTTCTTTACGACTCATTGGGTTTGAGGCTTCTATATCATTGTAATTTTTTTTAAA
CATCTCTAATTGCTTCGTTATTGAATTCAAACAGTCACGTTCTGATGTTATTGCTCTGTT
CCAATCTTCACATTCTTTTTCGTCTTTTTTCAGTAATTGTTGTATTTTTTTCAGTTTCAA
ACTAAGGTATTTGATTTCGGACTCAATTTCCAAACTTTCGTCGCCTACATTTAAATATAA
ACGCAGTAAGGATTCATTTTTAATAGGTTTGTGACATTCCGGGCAGGTGTGGGAGCTTTT
CAACGATTCTTGTATACAATCATCGTGAAATATATGCCCGCACGTTGTTGTAACAATGAT
TTCATTTTGTTTCGTAGTTTTTTTGCAAAGCGAACACGTCAATTCCATATTCTGGAAAAG
AAAACATTCGGCGTAATTCTCTCATTGGAAATAATTCCATAAATGAGTCGTCTATTATCA
A
(2281 bp)

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