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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13217_c0_seq1
Scaffold_idBomo_Chr13
NCBI non-redundant
(nr)		ap_endonuclease_[Danaus_plexippus]
Ontology
GO:0003677 F DNA binding
GO:0003906 F DNA-(apurinic or apyrimidinic site) endonuclease activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006281 P DNA repair
GO:0006284 P base-excision repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0008311 F double-stranded DNA 3'-5' exodeoxyribonuclease activity
GO:0008408 F 3'-5' exonuclease activity
GO:0016829 F lyase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:22.90 TPM:23.03
ORF EntryO_BomoSK13160_complete:A_BomoSK_comp13217_c0_seq1
Sequence
(Nucleotide)
TATATTTTGTTACGAAACAAAATGTATCAGTCCATATTTTCGCAATTTACCAAAGAAACG
TAAAATCACAGAATCATTTGTCTTTTTTTTTCAAATTGAAATATAAGATTACAAATCACG
AGCTGCCGTGGCTTAATGTTTTTAACATTTTTCGAAATTTTTAAGCACACCTGCACCAAT
CCGCTTTTTCGGTTTAAAGAATAGACAACCGTTATTATAACCTACAATGTCTTCAACGGT
TCAAGATTCAAGGTTCGCGGCGGCATAACCACATCTCATATTGTGGGTCTAACACTAATT
GGGGGCGTCTTGCCTATCTGCAGCAATCAAATCGATTAAGCATTGAAAATTAATGAATTT
CCTGGGTTTTTTTTACAAGCAACACTTAATATATTATAGTAAAATTTTTGATTAGACACA
AGTTTTTGCCAATATTTATAACTCGTATGAGTGTCGGGAGCAGTTGGGCGGGTCGGGCTG
GTGGGCAGTTCGGCATCGGGACAAAGTACACAAGGACTTTATTCCTTCGGTTTCTCGGCT
GTTGTTAGATTTAGAAAGAGCGCTATCGGACAGTGGTCGCTGCCATACACCTTGTCGCGG
ATGACGTTGTCGCAGACCGACGGAATCAGTCTGTCGGAAACTATGAAGTAATCCAAACGC
CATCCGACGTTCTTCGAACGGGAATTCATCATGTACGTCCAGAAAGTGTACGAGCCCGTC
TGGTCGGGGTGGAAATGTCGGAAGGTGTCGACGAACCCGTCGCCGAGCAGCTGCGTCATG
CCGGCGCGCTCCTCGTCCGTGAAGCCGGCATTCTTTCTGTTCGTCTTCGGATTCGCTAAA
TCGATTTCCTTATGGGAAACGTTCATGTCGCCGCATATTATCACAGGTTTCTTCTTATCT
AATTCTTTGACGTGTTTGAGGAATTCCTCGTTCCATCGCAGCCTTTTGGGCATTGTGACT
AGTTTCCGGCCCGCGTTCGGTACGTACGTACAAATCAAGTAAAACTGTTCGTACTCCGCC
GTTATAATGCGACCTTCATCGTCCAGCTCTTCATTTTGCAAGCCATATTTGACATTCATC
GCTAGCTTTGTCGTGTAAATGCCTACGCCTGCGTAGCCATCTTTGTCCCCGGCCAACCAG
TACGCATGATAGCCTGGAACATTAGCCACTTCGTCTGGCAATTTGTCCGTTGCACATTTC
GTCTCTTGCAAACAGAAAATGTCCGGCTTCTCGTATTTGATGTAATCCAAGCCTCCTTTG
CTCATCCACGCTCTGATCCCGTCAACGTTCCAACTCGCTATCTTGAAGTTCCATTCTTTG
CCTTGCGTCGTCTTCGATTCATTTGTAAAGTCAATATCTTCGTAATTTGTCGTGGATTTA
TTCTTGGGCGGTGCTTTCTTTTTCGCGTCTTCGGTGTTCACCTTTTCTTCGACAGGCTTG
CGTCGACGTTTTGTAGTTGGCTCACCAGTGTCCTGTGGCTCCTCATGGGATTCAGCAGAT
ACTTCTGCCTTCTTTTGACCCCGCCTTCCTTTTGCAGGCTTTGGTTCAGGTTTTTCCTCT
TCATCAACATTATCGTCTTCATTTTGTGCAGCTTTTTGTTTTTCATCTTTTTTTGTGACC
TTCCTTTTCTTAGAAGCTGGTTCATCTTCCCTCACAGCATCATCAGTCTCTTCTTTGGCT
GCTACTTTTTTGCCCTGATTTTTGCGACTTTTGGTTTCCTTCTTTTTTGGTTCCTCTACA
TTTTCCTCTTCTACTTCATCATCATCATTCTCTGCAGGCTTCTCAACAGCTTGGTTCTGA
ACTTTCTTCTTGCCTTTAGCAGCTTCTGGCTTTCCTTCATCCTCAACAGTTTCAGATATA
TCAGACTCAGCTTCTTCAGCTTTGGCTTTGCGTCCTCTGCCCCTACCTTTTGGTTTGTCT
TCAACTTCATCTTCTATTTCTTGTTTAGGTTTCCTACCTCTGCCTGTTCTAGGCTCTGGT
TTTTTAACTTCCTTTTTGGTTTGTTTCTTACGTCCCCTACCTGAAGGAACTTGTTCTTCT
TCTATGTGACCATTTGTTTCTGAACCATCTTCACTAGGATTATTTTCCTCAGACACTGCC
ACTTCATCTTCAACTGAGGGTTCATCAGTAGATTTATTTTCCACCGGAGGTTCCTCTACA
TTCTTCTTCCTTCCTTTTTTTGGTGCTGTTTCCTCTATTTTACCATTCTCATCTTGTCCA
TTTGTGTCACCGGCAGCTTTCCTTCCGCGTTTGGTTTTCTTTTCAGATACAATGTTCTTT
TCATCAACTTCAGCTTCTACAGACTCCGTTTCAGGATCTTCAACTACTTTTGCTTTGCCT
CTTCCTTTTTTAGGTGCATCATTGTCTGCTACTTTTGCTTCTGCTGCTTTCTTAGCTTTT
GCTGATCTTGGTGCCATGATCTAAGAAGATATATTTGTCTTCGTTATTACTGTAACAGTC
TTATTACTAGAAGATAATTGGAATTCAAAAATAAAAAAACGCGTTAAACACCAATGGTGG
CGGGCGAAATTTCCGGTAAAAAAAAAA
(2547 bp)

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