SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13213_c0_seq8
Scaffold_idBomo_Chr17
NCBI non-redundant
(nr)		putative_splicing_factor_pTSR1_[Danaus_plexippus]
Ontology
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005685 C U1 snRNP
GO:0006376 P mRNA splice site selection
GO:0042802 F identical protein binding
GO:0045843 P negative regulation of striated muscle tissue development
GO:0050733 F RS domain binding
GO:0071004 C U2-type prespliceosome
Transcript
Level		FPKM:0.59 TPM:0.59
ORF EntryO_BomoSK13155_3prime_partial:A_BomoSK_comp13213_c0_seq8
Sequence
(Nucleotide)
CTCCCGCCCACGTAGTGCCGCCGCCCGCTGCTCCGCTCGCGCTCCGACGCGCCGCGCTCT
TCGCGTCGCTTGTCCACAGTTTTCTTTAATTCTGTTAATTTTTCACGAATAGTTATGAAT
CCGAGATGCAATTTTCCTCCAAAATGATCGGCCAAACGTCTATCATTGTCGTGAATGCCA
AGATAGGCTGAACAAACTTCGCAAACTCGTAACTTCTGCTGTTGGTAGGACGAAGCGGGC
ATGGAATTACGATAGTCTTGCTCGGCGATAGCTTTCTTTTTGCGGAGTTCGTCAATCTCT
CCCATTAATTTGACACTCTCCTCGACCATACCCTCTTCTCCGAGTGCCTCAGCCCGAGCC
AGTTTCTGCCCTATTTGCTCTGCCAATTCATGAACAGCATTGGCTTTCTCCGTCACTTCT
GCTGACAGTTCTTCTTGTGTCTCCGCCAGACGTTGCTTAGCAGCAGTAGTTCGACGATCA
CAATCAGCTATAAACGCCTCTAAGTGCTCTGTAGCCTTTACATAAAATAGTAAAATTTTA
TTTAATTGACCACAATTTAAATACAATAATTATAAGTCTTACGGCTTTGATCCATGGTCG
AATTCATGTCAAAACAAAACATTTGAGACTGGAAGTTTTAAGATACATTAATCAAAATTT
GAAATTGTGTAAATATCTTATATTTCAATTTTAACAAAAAAAAATGCAGTTATTTATACT
CACATCAATGTCATAGAAATAATCTTTGGTCTTGGAAGCTATTTCATAGTCCGCCCGTAG
AGCCAGATCATGTATTTTGGGACACTCACCTAAATCCATACGAGAACAGCCTAACTCATA
CAATCTATCCCTCATCTGTTAAGTATTGTGATGAGCGATAAAGACTAGTGTTGGGCATTT
TGGTGGATGACAGTATTTCATGTGGACAACATTGCAACAAAAATGATTTGCATACAGAAT
CATCGTAAAATTTTACCCCATGTCTGTCACTTTCACCATTTCGAGCTGTGCCCATAAGCT
GATCTAGCATAGCCCTCATTTGCTCGTGTGCTGACATTTTCAAGTCTAATGCCTTTTGTG
AATGTTTTACAGATAATCAGACAGCAGAAGTTGATAGAATAAATCTGATCAGTAGTGAAA
TCCAAAGATTTCAACCTAATTTCTACTATTCTTTTCACTGGCGCTGTCTACGATTCCCAT
AATTTGGCAAATGGCAAAATCAAAA
(1225 bp)

- SilkBase 1999-2023 -