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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13213_c0_seq7
Scaffold_idBomo_Chr17
NCBI non-redundant
(nr)		putative_splicing_factor_pTSR1_[Danaus_plexippus]
Ontology
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005685 C U1 snRNP
GO:0006376 P mRNA splice site selection
GO:0042802 F identical protein binding
GO:0045843 P negative regulation of striated muscle tissue development
GO:0050733 F RS domain binding
GO:0071004 C U2-type prespliceosome
Transcript
Level		FPKM:3.68 TPM:3.70
ORF EntryO_BomoSK13154_3prime_partial:A_BomoSK_comp13213_c0_seq7
Sequence
(Nucleotide)
CTCCCGCCCACGTAGTGCCGCCGCCCGCTGCTCCGCTCGCGCTCCGACGCGCCGCGCTCT
TCGCGTCGCTTGTCCACAGTTTTCTTTAATTCTGTTAATTTTTCACGAATAGTTATGAAT
CCGAGATGCAATTTTCCTCCAAAATGATCGGCCAAACGTCTATCATTGTCGTGAATGCCA
AGATAGGCTGAACAAACTTCGCAAACTCGTAACTTCTGCTGTTGGTAGGACGAAGCGGGC
ATGGAATTACGATAGTCTTGCTCGGCGATAGCTTTCTTTTTGCGGAGTTCGTCAATCTCT
CCCATTAATTTGACACTCTCCTCGACCATACCCTCTTCTCCGAGTGCCTCAGCCCGAGCC
AGTTTCTGCCCTATTTGCTCTGCCAATTCATGAACAGCATTGGCTTTCTCCGTCACTTCT
GCTGACAGTTCTTCTTGTGTCTCCGCCAGACGTTGCTTAGCAGCAGTAGTTCGACGATCA
CAATCAGCTATAAACGCCTCTAAGTGCTCTGTAGCCTTTACATAAAATAGTAAAATTTTA
TTTAATTGACCACAATTTAAATACAATAATTATAAGTCTTACGGCTTTGATCCATGGTCG
AATTCATGTCAAAACAAAACATTTGAGACTGGAAGTTTTAAGATACATTAATCAAAATTT
GAAATTGTGTAAATATCTTATATTTCAATTTTAACAAAAAAAAATGCAGTTATTTATACT
CACATCAATGTCATAGAAATAATCTTTGGTCTTGGAAGCTATTTCATAGTCCGCCCGTAG
AGCCAGATCATGTATTTTGGGACACTCACCTAAATCCATACGCTGCAAAAGAAAAAATTA
AAACCACATGAAAAGTAAAAGTTCATTTTTATGACAAAATGTATGGGTCAGGAATGGTGT
CACATATGTTTATGCTTGCAAAACTCAAAGACCCCAAATCATACTGTTTCAACAATCTTT
ATGAAAATATGTAAAAATATCTCCATAGGTAAAATATAGAATATAAAATACATACTATAA
CACCGACAAATGCACACTGAGCTGGTTCACTCCCTCGTTCAATAATAATTTTCAAATACT
TACAACAAATAGTGGAAACACCCTCCAGAATTTCTTACAATACTATTTTGGTTTTAAGAG
TGAAGTGAAGCCATAAAATAAAATGAATGTGACAATCAAGCACAATTACAGAAAGTGTGT
AGACTAGAACAATAGCTATGATTGCCACTTAATATTTTCAATTTTTATATATAGATGTAG
ATCATGTTTTTCATACAACAAATTGAATTTTATTTCAGTTTTGTTTGTTTATTATTTATG
CTTACATATTGTATATTGTTTTTAGAATATATTTTTTTTAAGAATTTTATTCCATTTTAG
CACATGCAAATGTATTTGTACCCCTACACATTTAAACAGCACAGTACATACCCAATGTAG
TTATTGTATGTCACCAAATATTTCACACCAGGCTAAGTTTTTTGAAGGTCCTAAAATTTT
ATATGTACTCACCAATGCAGCATTAGTAAACAATTTAATGACAAGAACCATATTGAATTA
AATCCTGCTTAGCAGTAAGATTACATTCAGCTAACTATAAATGTTTTATACGTACATCTG
GGTACTTACAGAACAGCCTAACTCATACAATCTATCCCTCATCTGTTAAGTATTGTGATG
AGCGATAAAGACTAGTGTTGGGCATTTTGGTGGATGACAGTATTTCATGTGGACAACATT
GCAACAAAAATGATTTGCATACAGAATCATCGTAAAATTTTACCCCATGTCTGTCACTTT
CACCATTTCGAGCTGTGCCCATAAGCTGATCTAGCATAGCCCTCATTTGCTCGTGTGCTG
ACATTTTCAAGTCTAATGCCTTTTGTGAATGTTTTACAGATAATCAGACAGCAGAAGTTG
ATAGAATAAATCTGATCAGTAGTGAAATCCAAAGATTTCAACCTAATTTCTACTATTCTT
TTCACTGGCGCTGTCTACGATTCCCATAATTTGGCAAATGGCAAAATCAAAA
(2032 bp)

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