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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13213_c0_seq4
Scaffold_idBomo_Chr17
NCBI non-redundant
(nr)		putative_splicing_factor_pTSR1_[Danaus_plexippus]
Ontology
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005685 C U1 snRNP
GO:0006376 P mRNA splice site selection
GO:0042802 F identical protein binding
GO:0045843 P negative regulation of striated muscle tissue development
GO:0050733 F RS domain binding
GO:0071004 C U2-type prespliceosome
Transcript
Level		FPKM:2.47 TPM:2.49
ORF EntryO_BomoSK13151_3prime_partial:A_BomoSK_comp13213_c0_seq4
Sequence
(Nucleotide)
CTCCCGCCCACGTAGTGCCGCCGCCCGCTGCTCCGCTCGCGCTCCGACGCGCCGCGCTCT
TCGCGTCGCTTGTCCACAGTTTTCTTTAATTCTGTTAATTTTTCACGAATAGTTATGAAT
CCGAGATGCAATTTTCCTCCAAAATGATCGGCCAAACGTCTATCATTGTCGTGAATGCCA
AGATAGGCTGAACAAACTTCGCAAACTCGTAACTTCTGCTGTTGGTAGGACGAAGCGGGC
ATGGAATTACGATAGTCTTGCTCGGCGATAGCTTTCTTTTTGCGGAGTTCGTCAATCTCT
CCCATTAATTTGACACTCTCCTCGACCATACCCTCTTCTCCGAGTGCCTCAGCCCGAGCC
AGTTTCTGCCCTATTTGCTCTGCCAATTCATGAACAGCATTGGCTTTCTCCGTCACTTCT
GCTGACAGTTCTTCTTGTGTCTCCGCCAGACGTTGCTTAGCAGCAGTAGTTCGACGATCA
CAATCAGCTATAAACGCCTCTAAGTGCTCTGTAGCATCAATGTCATAGAAATAATCTTTG
GTCTTGGAAGCTATTTCATAGTCCGCCCGTAGAGCCAGATCATGTATTTTGGGACACTCA
CCTAAATCCATACGCTGCAAAAGAAAAAATTAAAACCACATGAAAAGTAAAAGTTCATTT
TTATGACAAAATGTATGGGTCAGGAATGGTGTCACATATGTTTATGCTTGCAAAACTCAA
AGACCCCAAATCATACTGTTTCAACAATCTTTATGAAAATATGTAAAAATATCTCCATAG
GTAAAATATAGAATATAAAATACATACTATAACACCGACAAATGCACACTGAGCTGGTTC
ACTCCCTCGTTCAATAATAATTTTCAAATACTTACAACAAATAGTGGAAACACCCTCCAG
AATTTCTTACAATACTATTTTGGTTTTAAGAGTGAAGTGAAGCCATAAAATAAAATGAAT
GTGACAATCAAGCACAATTACAGAAAGTGTGTAGACTAGAACAATAGCTATGATTGCCAC
TTAATATTTTCAATTTTTATATATAGATGTAGATCATGTTTTTCATACAACAAATTGAAT
TTTATTTCAGTTTTGTTTGTTTATTATTTATGCTTACATATTGTATATTGTTTTTAGAAT
ATATTTTTTTTAAGAATTTTATTCCATTTTAGCACATGCAAATGTATTTGTACCCCTACA
CATTTAAACAGCACAGTACATACCCAATGTAGTTATTGTATGTCACCAAATATTTCACAC
CAGGCTAAGTTTTTTGAAGGTCCTAAAATTTTATATGTACTCACCAATGCAGCATTAGTA
AACAATTTAATGACAAGAACCATATTGAATTAAATCCTGCTTAGCAGTAAGATTACATTC
AGCTAACTATAAATGTTTTATACGTACATCTGGGTACTTACAGAACAGCCTAACTCATAC
AATCTATCCCTCATCTGTTAAGTATTGTGATGAGCGATAAAGACTAGTGTTGGGCATTTT
GGTGGATGACAGTATTTCATGTGGACAACATTGCAACAAAAATGATTTGCATACAGAATC
ATCGTAAAATTTTACCCCATGTCTGTCACTTTCACCATTTCGAGCTGTGCCCATAAGCTG
ATCTAGCATAGCCCTCATTTGCTCGTGTGCTGACATTTTCAAGTCTAATGCCTTTTGTGA
ATGTTTTACAGATAATCAGACAGCAGAAGTTGATAGAATAAATCTGATCAGTAGTGAAAT
CCAAAGATTTCAACCTAATTTCTACTATTCTTTTCACTGGCGCTGTCTACGATTCCCATA
ATTTGGCAAATGGCAAAATCAAAA
(1824 bp)

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