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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13185_c0_seq3
Scaffold_idBomo_Chr28
NCBI non-redundant
(nr)		PREDICTED:_RNA-binding_protein_5-A-like_[Amyelois_transitella]
Ontology
GO:0000166 F nucleotide binding
GO:0000245 P spliceosomal complex assembly
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0006915 P apoptotic process
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0042981 P regulation of apoptotic process
GO:0043065 P positive regulation of apoptotic process
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
Transcript
Level		FPKM:11.18 TPM:11.24
ORF EntryO_BomoSK13066_complete:A_BomoSK_comp13185_c0_seq3
Sequence
(Nucleotide)
GCGCATTTACGTTGTAGATGTCTCTGGGCTTCGGTAGCCACTTAACACCAGGTGAGCTGT
GGGATCGTCCACTCATCAAAGCAATAAATAATAAAAATAAATGTAAATTAATTCCAACCA
GTAACATTTTCAACAGGAAGATTAGTTTTCTAATTATTTAAAAAAACTGGTTAATTTTGA
GGATGACAACGACTAACCTGCAGCTCCTTCCTGAACTGAAAAGAAACATTAATTTTTAAG
ACAAAATGAAAAATACCCACCTATTTCCCTTCTTCTTGTCCAACAACTTCTTTATATCTT
GCTATCATAAGTTTCTTAACTGTATCGCGATATGTTTCACCAGGTGTGGGAGTGTATATA
CCTCTTTTCTGCCCCAGACCAGCTAAACTTGGCCTCTGTTCTGCTTCTATGGGAGCTATT
CGTCCCTGCTCAGTCTTACCTAAACCTCGACCTTCCGACCAGCCCATTTTTTGCAGCATT
TTACCTCCTATTGTATCTACTACATTTGGAGGTGGGTGCGGGTTAATGGGTGGACCTATT
GGTTCAGAAGGCTCATAACGTTTTCTTATCATTGGAGGCTCATCTTCACCAAATTTCATA
CGTCGCTCAGCTGCCCTGTCTCTATAACCATTCATCTGTGGAATCAAGTCATTCTTCTTC
CTAAATTCAACTAGATTTTGTTTGTGCAAGTCTGACATAACTTTATGCTTATTCAACACT
TCTACAGAAGGGAATTTCCTTTTGCATAACAAGCAGGTTAATTTGTCCCAGTCAATAATG
TCATCATCATTATCAAATACTGGTTCTGAGATCTTTTTGACCAAGAATTCATCTGTGTTG
GGAGGTGGGGATATTTCTCTTACATGAGTTAATGATGGTCCAGCTCCTAGTACTGAAAAA
CCAATGTCTGCTGAGCCTTTGCTAGCACTTGTGTCAGTTGGCTGTTCCATAACAAAGTTA
CTCCGAGCATTCTCTTTCTTTTGATTTAGAGTCCGTGCCCATCTTTCCATATCCTTAGCT
ATCTTTTTAGCTACTTTAACTTTGTCTTCTTTGTCTCTCCTTTTCTTTTCATCAGGCTCC
TTGGCCTCTCTTTGTTTGTTTTGTTCAGCATTCTGAGCCTGTGTTGCAGCAATATAAGTG
TTTGTTTTACCATCCCAATACATATATTGACTGATTTGACTATTATAAAAATATTGTGTC
TTCCCATCATAGTATAAACAAGTTGACGGGTCATAATAGTAACCAGATGACTCATCATAC
ATGAATGTTCTCACATCTGGGGCAGGATAAACTGTCTTCCCATCACCTATGGGTACATTT
GTTTTTGTAGTTTGGGTAGTACCAGTGAAAGGTACAGCACCAACTGGCGTCCATGATAGC
TGTCTAGCCTGGGCTGCCGATATAGCAGACTGAGCTACTGCAGCAGCTGCATTGACTCGA
TCAGCCTCAGACATTGCTTGAGTTGTTGCACCACTGTACGAAGACATTTGAGAGTAGTAT
GACGTATAGTCAACTTGTGTTGGTTTAACAATTTTTTTAGGTTCATTGTAAAAGCTTATA
AGCACTTCTCGACCGTCAATCCTTAATGGTGGTTGGAGATTCACCAACTCTGTATGTGCT
GTTGTAGAATCTGCTATGGAGTTGAAATTGATGTAGGCGAGACACTTTGATGCACCTGTT
AAAGTTTCTCTACCAATTGAAATACCTACAATTAACTCTAGAACTTCTTTACTGCAACGT
AGTTTAAGCTCTTCCAATATATTTTCTTCAGTAGTCAAAGCATCTAGCCTCCTAAAGAGT
AACCTCTTTGTGATGCCAGGTGTTTCGACTACACCGTTACGATCCCCATCACCTCCATAA
ACTACACCCTCCGATCTTTTCCCATTACAAGTTCTACGGTAACAGACCTGACGTCTTTTA
AAGTTGTATAGACCACACTTGCAGATCCAATCACCCGGTGATGCGTTGTTCTGCACCTCA
TCCTGGTGCTTGTCCTTTTCTATTTCCATATCAGACCTGTCCCTCTCACGACTATCGGAT
CGACTACTAGACCGTGAGCTCTTTTTGTCATCGCTGATGACGGGCGGCGAGGGGGGCGCG
GGCGCTTCCTCGTACCGTTTTCTGTCGCGTTCTCGGTCACGGTCGCGATCCCGGTCGTGG
CGGTCACGCCGAAAGTCGCGCTCGTGACGAGGCCGTCTATCATGCGAGTGTCGGTGTCGG
GATGGCGACCTGCACTCAGGGCTGACGTTCCTAGGCTCCCATACAGGCGACCGATCGCGG
AGTTCCCATTTGTTGGTGTCCCACCTCGAGCAGCGCTCCTCTCGACTTCGCCAAGACATC
GTAGCCTGCTGTAACGTAATTACGAGTAACTTCCCTAGTATCTTAACACTTTAGGCCGGA
TGTTAAATTATTTACTTTAATAAAGTGCACTACACTTGAAAATTCTGTGATCGTAATTAG
ATTATTTCCTTTCATAAATCATTACAAAAGACTGACGCCATATTTTTCAAGTGTAGT
(2517 bp)

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