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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13185_c0_seq1
Scaffold_idBomo_Chr28
NCBI non-redundant
(nr)		PREDICTED:_RNA-binding_protein_5-A-like_[Amyelois_transitella]
Ontology
GO:0000166 F nucleotide binding
GO:0000245 P spliceosomal complex assembly
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0006915 P apoptotic process
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0042981 P regulation of apoptotic process
GO:0043065 P positive regulation of apoptotic process
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
Transcript
Level		FPKM:4.02 TPM:4.04
ORF EntryO_BomoSK13064_complete:A_BomoSK_comp13185_c0_seq1
Sequence
(Nucleotide)
GCATATTATTATTTTTTTATTCATAAACGTAACATTAGTTGGTTAGTAAGGTAAAATAAT
TATAAATAGTCCGTTATGTATAGAAATATTTATTTTAAAATATTAAAGACCGCGTCACAT
TTTTTTATCGTACATATTTTAAATGCACAATACTTTTAACCCACGCCTTACAATCATCGA
ATCTCGAAAATTTGTTCAAAACTAACTGCTATAAATACCTAAGTAATAATGATAATAATA
ATAAGACTGAATGAAAAATTTAAAAATCCCATTTACCCAATACTACACATATGCTAGTGA
AATTAAAATGTACCTAACTATATACACGTATATGTTAATTGCTGTTTTTATTCTTTTATT
AAAATAAATCATTCTTTTATTATCGAATAGAATCCATCAACAGACGTCGTTGTGATGTTT
TACTAGGACGGCAAATTCAATCGACTAGTATGCACTTATTGAGTACAAATTATAAGTTAC
GGGAAAATGCTACCGTACAGCTGACAAGGGCGCATTTCGGCGCTTCTATATAAGTTTAGG
ATTTCATGTATATACATTTATTTTAACAACAATTATGCAACTTGATTACCTACCTTTTAA
TACTAATCTCTGTAAATTATTTATGTCTTTATTGTAATAATCATCATTAAATTTAGCTTA
AATGAACACCTATGTTTAGGCTTAATTTAATCTTGTACAAGAACTCATCTTCGACAGGCT
TTCATTAGCTAGACCTGTATCGACCTAGCCAACGTAATATTCACAAAATCAACGCAGATT
AACTTAAATATTGACATTCATCAATGAAAATACATTAGTTTCATTACTTTAGCGTAATAT
CTTGCCCCGAAAAACACTAGAATTAAAATATTACTTTAATTTTTGGGCTTATTATTAGAG
CGTGTTTTTATAATATAACCTACCTATATTTATCTTTATTTACAATCAAACGCAATCTCA
AAATTCCTTACTACATAATTATTTTATATATATATACATTAAAGTTAAACTATACACGAA
ACGCTACGGAAGAAAGCTAAATATTTTTAAAATGGCGTTTGATCAATTCATTTCCGATCC
AACGAGTATAAAATGAAGTACTTTTTAATATTTTGTTTGGCACGTGGTTCCAGCTTCGCG
CGTAGACTCGATTGTCGAATACGCGTGTGACGGGAGCGTTGTAGAATTCCAGGTCGAATC
TATTTCCCTTCTTCTTGTCCAACAACTTCTTTATATCTTGCTATCATAAGTTTCTTAACT
GTATCGCGATATGTTTCACCAGGTGTGGGAGTGTATATACCTCTTTTCTGCCCCAGACCA
GCTAAACTTGGCCTCTGTTCTGCTTCTATGGGAGCTATTCGTCCCTGCTCAGTCTTACCT
AAACCTCGACCTTCCGACCAGCCCATTTTTTGCAGCATTTTACCTCCTATTGTATCTACT
ACATTTGGAGGTGGGTGCGGGTTAATGGGTGGACCTATTGGTTCAGAAGGCTCATAACGT
TTTCTTATCATTGGAGGCTCATCTTCACCAAATTTCATACGTCGCTCAGCTGCCCTGTCT
CTATAACCATTCATCTGTGGAATCAAGTCATTCTTCTTCCTAAATTCAACTAGATTTTGT
TTGTGCAAGTCTGACATAACTTTATGCTTATTCAACACTTCTACAGAAGGGAATTTCCTT
TTGCATAACAAGCAGGTTAATTTGTCCCAGTCAATAATGTCATCATCATTATCAAATACT
GGTTCTGAGATCTTTTTGACCAAGAATTCATCTGTGTTGGGAGGTGGGGATATTTCTCTT
ACATGAGTTAATGATGGTCCAGCTCCTAGTACTGAAAAACCAATGTCTGCTGAGCCTTTG
CTAGCACTTGTGTCAGTTGGCTGTTCCATAACAAAGTTACTCCGAGCATTCTCTTTCTTT
TGATTTAGAGTCCGTGCCCATCTTTCCATATCCTTAGCTATCTTTTTAGCTACTTTAACT
TTGTCTTCTTTGTCTCTCCTTTTCTTTTCATCAGGCTCCTTGGCCTCTCTTTGTTTGTTT
TGTTCAGCATTCTGAGCCTGTGTTGCAGCAATATAAGTGTTTGTTTTACCATCCCAATAC
ATATATTGACTGATTTGACTATTATAAAAATATTGTGTCTTCCCATCATAGTATAAACAA
GTTGACGGGTCATAATAGTAACCAGATGACTCATCATACATGAATGTTCTCACATCTGGG
GCAGGATAAACTGTCTTCCCATCACCTATGGGTACATTTGTTTTTGTAGTTTGGGTAGTA
CCAGTGAAAGGTACAGCACCAACTGGCGTCCATGATAGCTGTCTAGCCTGGGCTGCCGAT
ATAGCAGACTGAGCTACTGCAGCAGCTGCATTGACTCGATCAGCCTCAGACATTGCTTGA
GTTGTTGCACCACTGTACGAAGACATTTGAGAGTAGTATGACGTATAGTCAACTTGTGTT
GGTTTAACAATTTTTTTAGGTTCATTGTAAAAGCTTATAAGCACTTCTCGACCGTCAATC
CTTAATGGTGGTTGGAGATTCACCAACTCTGTATGTGCTGTTGTAGAATCTGCTATGGAG
TTGAAATTGATGTAGGCGAGACACTTTGATGCACCTGTTAAAGTTTCTCTACCAATTGAA
ATACCTACAATTAACTCTAGAACTTCTTTACTGCAACGTAGTTTAAGCTCTTCCAATATA
TTTTCTTCAGTAGTCAAAGCATCTAGCCTCCTAAAGAGTAACCTCTTTGTGATGCCAGGT
GTTTCGACTACACCGTTACGATCCCCATCACCTCCATAAACTACACCCTCCGATCTTTTC
CCATTACAAGTTCTACGGTAACAGACCTGACGTCTTTTAAAGTTGTATAGACCACACTTG
CAGATCCAATCACCCGGTGATGCGTTGTTCTGCACCTCATCCTGGTGCTTGTCCTTTTCT
ATTTCCATATCAGACCTGTCCCTCTCACGACTATCGGATCGACTACTAGACCGTGAGCTC
TTTTTGTCATCGCTGATGACGGGCGGCGAGGGGGGCGCGGGCGCTTCCTCGTACCGTTTT
CTGTCGCGTTCTCGGTCACGGTCGCGATCCCGGTCGTGGCGGTCACGCCGAAAGTCGCGC
TCGTGACGAGGCCGTCTATCATGCGAGTGTCGGTGTCGGGATGGCGACCTGCACTCAGGG
CTGACGTTCCTAGGCTCCCATACAGGCGACCGATCGCGGAGTTCCCATTTGTTGGTGTCC
CACCTCGAGCAGCGCTCCTCTCGACTTCGCCAAGACATCGTAGCCTGCTGTAACGTAATT
ACGAGTAACTTCCCTAGTATCTTAACACTTTAGGCCGGATGTTAAATTATTTACTTTAAT
AAAGTGCACTACACTTGAAAATTCTGTGATCGTAATTAGATTATTTCCTTTCATAAATCA
TTACAAAAGACTGACGCCATATTTTTCAAGTGTAGT
(3456 bp)

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