SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13173_c0_seq1
Scaffold_idBomo_Chr6
NCBI non-redundant
(nr)		vacuolar_protein_sorting_4_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0006810 P transport
GO:0007033 P vacuole organization
GO:0007049 P cell cycle
GO:0008152 P metabolic process
GO:0008568 F microtubule-severing ATPase activity
GO:0009838 P abscission
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016197 P endosomal transport
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0017048 F small GTPase binding
GO:0030496 C midbody
GO:0031122 P cytoplasmic microtubule organization
GO:0031902 C late endosome membrane
GO:0032466 P negative regulation of cytokinesis
GO:0051301 P cell division
GO:1903774 P positive regulation of viral budding via host ESCRT complex
Transcript
Level		FPKM:32.31 TPM:32.50
ORF EntryO_BomoSK13024_complete:A_BomoSK_comp13173_c0_seq1
Sequence
(Nucleotide)
TAAATATATTAAAATAAAAACCTAAATAAGACCTTGTCTATTGTTGTTTATTTTAAAATT
TACTTACATTTTTTATACATTTTAGGTTACAACAAAATTATGCGGGATAGTAAATTATTC
CACTGAAATAAGATAAACATCCCTGGATATATAAAAATATAACATACGAAAATTAGTACT
GAGTAAATAATTTATTGTAATTATGTGTACATGGCAGCAGGGCTTCTAAACACAATCATT
CTTGATAAAAGAAAACAATTTAATTTTTTATTTACAATATTCGTGAGCATTTCTTGAACT
TCGCAAATTTGATAACCCTGTCATGTCACAAAAATAAAATCCACAAAGATCAAACTTCAA
AAATTCGTTCTATATTGTGTAGTAGGCATTACTTTAGCAACAAAAAGTTAGCGGACGAAG
CTAGAGATTACAGGTATTCATTACATACTTACAAATATATAAATACCTACAATTCAATAT
TGACAAGCAACTCACGATTTTATGAAGTTTTTTAAACTTTACATTTACAACATTGATAAT
GCCAAATTTTTATTTTACTATTTTCAGAAAGAGTATGTGCTTTTGGAGTTAGTAATAATC
AATATTAAAAATAAAAAATCAGTATTTATAGCAATACTTACAAATAATAATAAAATCGTG
GAAATTCAATTGTTTCTTTCTTTCGTTTTTTTTTTGACAATCACAAAACAGAAGCAATCA
AAATATTAGGCACTGTGCTTTCAACTTCTTAACATATTCATATTTTGTGTAATTATAATT
ATTTAGACGTAATTTGTCATTAAAACAAATTTAAGCTTATCCTTCCTGACCAAAGTCTTC
CATGAATTTCCTCAATTTTACCATATCATCATCATTTACAGTAGGCTTCGAAACAGCTAA
AGATCTCAACATGTCTGACATTGTAACTGGCGGCTCGCCAAGTTTGTCACTAGGCACATC
GATCCAGGTCATTTCTATAGCTCCTGGGTCACCAGGCGAACATGGCGTCAGAAGGTCATT
GACAATAACATTAGGATCAGTTGGGCTCGGACCAGATATTTTTTTAAAGTGTGTGGCAGA
TTGTACTTTACGTACAGGTTGCATTAGTGCATCACGGACAACAATGCTGATATCCGCACC
GGAATATCCCTCACTTTTAGCCGCTAATAATTTCATATCTTGTTCAGACAGTTGATGTCT
TGTGTTGCCTAAATGCAACTTAAACATATCAAGACGGGCATGTTCTTCTGGCAGAGCAAT
GTAAATACGCTTCTCAAAACGCCTTCGAATAGCAGAATCAAGGACCCATGGTATATTTGT
GGCACCAAGAACTAAAATGCCATCCATATCATTACCAACACCTTGCATTTGAACAAGGAA
TTCTGTCTTGATCCTACGAGCCGATTCAGATTCGTTGTCTGAACGGGAAGAGCAAAGTGA
ATCTATTTCATCAATAAAGATGATGCTCGGTTTATGTTGTCGAGCAAGGTCAAATAAGTT
CTTTACCAACTTCTCCGACTCACCCAGCCATTTAGAAACCAGATCAGATGATGAAACAGA
GAAGAATGTTGAATTGTTTGCTTCAGTAGCCACAGCCTTTGCCAAGTATGACTTACCAGT
ACCAGGGGGTCCAAATAATAAGATGCCCTTCCATGGTATTCTCTTGCCAGTAAACAAATG
TGGAAATTTTATTGGTAGAATTACAGCCTCTTTCAATGCTTCCTTAGCGGCTTCTAGACC
AGCTACATCACTCCACTTCACATGAGGTTTCTCTACCACAATAGCTCCTTCAAGTTTCCC
TTGTAGTTTTTTCTTTTCTGGATCATCAGAATCACTGTCACTATCACTCTTCTTATCATC
ACTTTTGGATTCCCCATCCTTTACTGGTTTTTTCTTTTGATCTTTTTTGAGATATTCCTT
TAATTTTTCAGCTCTATCAAGATATTGAAGGCATTTTGCACGAATGCTTTCTTTTGCCCT
TTCACCTTGGGCCTCATATTTTACTGCATGAAGAAAATACTCTACACCGTGCTCATATAA
ACGTAATGCTTCTTCATAGTTCTTGTTCTTGTCCTCTTCAGTAGCCTTAGTGACAAGATC
AATAGCTTTTTGTAAGGTATTTGATGATGTCATTGTTTTTTAAATTCACCACAATTATGG
TGCAAAAAATTGCTCAGCTGTATCTTTGACGCAATTATTCGCTGCTATTATTATAAGAAA
ACAAGGCAAATATGAATTTATGTACCTACTAATTCAATAAAATTCAATAAAATTCGTTGT
CTGTCACGTACAAGAATGTCAAATTTAGATACAAA
(2315 bp)

- SilkBase 1999-2023 -