SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13140_c0_seq1
Scaffold_idBomo_Chr10
NCBI non-redundant
(nr)		PREDICTED:_protein_phosphatase_Slingshot_[Bombyx_mori]
Ontology
GO:0003677 F DNA binding
GO:0003779 F actin binding
GO:0004721 F phosphoprotein phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0005615 C extracellular space
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005925 C focal adhesion
GO:0006470 P protein dephosphorylation
GO:0008064 P regulation of actin polymerization or depolymerization
GO:0008138 F protein tyrosine/serine/threonine phosphatase activity
GO:0010591 P regulation of lamellipodium assembly
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0030036 P actin cytoskeleton organization
GO:0030054 C cell junction
GO:0035335 P peptidyl-tyrosine dephosphorylation
GO:0050770 P regulation of axonogenesis
Transcript
Level		FPKM:1.38 TPM:1.39
ORF EntryO_BomoSK12945_complete:A_BomoSK_comp13140_c0_seq1
Sequence
(Nucleotide)
TAATTTTACAAGCCAAATCATTCGAAATATGACAATCTTTGTTTGTTTAACATCCATGTG
TTCGCGCACTTAAGGGAAAAATTAACAATAGTACTAGCAACATACGACAGGTGGCGCGCG
AGTAGTTTTAATGAGTGATGTTTATATTATTATGTTTCGCGATAGGCAGAGCGGAGCGTG
GCCGAGTTTCACTAGTGATTGATACAACATTATTTCCATTTCGGTAAACATATGGATGAA
GGTCGACGTTAGTCGGGATCTTAGTTTTCGACTTTCAAATAAAGCATTTATTAAGTTGTG
TCTTTTTTACCCATCTCCGTCTAGTTTTATGGATGTGTCGGCCAGGACTCTTAGGACTAG
TCCAACAGTTGTGCGCTCCTTACAGTCGATACCCAATAACGCAGATTCTTCATTACGGCA
AACCACTACCAGGTATCTTGTTCGGCCTGGGTGAGCGCTTTCCAGTTTCACCGCCATTTT
GAGCGTCTCTTCAGGGCGCAATAAGTAGAACATAGATTGAAGGTGATTTTGTATGTCAGA
CTGGGGACATGAGCGAACTGGGGATGGTCTCTGATCCATGCAGCCGCGCTCCGTACCCCC
CAGCACCACTGCTGAGCCCTTATTCGCGAAGTAGCATTCATTGAGGCTGAAAGCGACCAT
ATTATCTTCGTATTCATTTAGACCACACAATTATATCACTCACTGCACACATTTTCTAAA
TACTGTCTTTTTCTTCTCGCTAACACGGACATGTTGTTTGTGGACATATCGAATTTAATA
TCGATCCAATAATTCACTAGGCAAACGGATTATCCCGAGAAAACGATATATATTTCAGTG
CGCGTGTTGCAATAATAAATTGAAACGATGAGTCTACCGAATGTAAGACGTCACAGCACT
GAGAGCTTCCCTCTGAATGGAGCACAAACTAACGTGTAAATATAGAATACGGCGCAGAAC
AGGAACACGTTTAAGGAAAAGGGATATATTATTATACTATGCTTTTAAATTTGTAATTAC
GTATTCAATAGTATTAATATTAATGTTAAATATATATAAAAATGAATTGCTGT
(1073 bp)

- SilkBase 1999-2023 -