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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13120_c0_seq1
Scaffold_idBomo_Chr5
NCBI non-redundant
(nr)		PREDICTED:_probable_RNA_helicase_armi,_partial_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0000578 P embryonic axis specification
GO:0003678 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005829 C cytosol
GO:0007275 P multicellular organism development
GO:0007293 P germarium-derived egg chamber formation
GO:0007318 P pole plasm protein localization
GO:0007616 P long-term memory
GO:0016246 P RNA interference
GO:0016787 F hydrolase activity
GO:0030424 C axon
GO:0030425 C dendrite
GO:0031023 P microtubule organizing center organization
GO:0031047 P gene silencing by RNA
GO:0032508 P DNA duplex unwinding
GO:0043025 C neuronal cell body
GO:0043186 C P granule
GO:0045202 C synapse
GO:0046843 P dorsal appendage formation
GO:0048477 P oogenesis
GO:0070725 C Yb body
GO:2000002 P negative regulation of DNA damage checkpoint
Transcript
Level		FPKM:10.00 TPM:10.06
ORF EntryO_BomoSK12897_3prime_partial:A_BomoSK_comp13120_c0_seq1
Sequence
(Nucleotide)
CGTAAATTGTTCTTTACAATATGAGGTAAATCACACCCAATGTATTTATCATTTTGAACT
GTGCTATTTATTACTTGGATCCATAATGGATCAACACACAAAAGATGAGGGTCACAAAAC
AAAATGACCGCCACTTGAGCTCTCGTAAGAGCAACATTTAACCTTTTCGCACTTCTTACA
AAGCCCAATGAATTTTTTTGGTCTTCTTGTAAATGCGATTCCGAAGATCTCACAGTTGAT
ATTAAAATAATAGGTCTCTCTTGCCCTTGAAACTCTTCCACGGTTCCTATTTTAGGCTGC
GGTAATCCCATCGCGTCAAATAACAGGCGTATACATTTAATTTGTGCTATGTAAGGTGTT
ATTATCCCAAGATCGTCAGGTTTAACATCTTTTTTATATAGTTTGCAGACGGTCAGTGCC
ACCATTGAAGCTTCTTGTGGGTTGTACCATGATGGACTGTCTTCAGCTCTAGCGTTACAA
CCTCTGATGCCATACATGAATATACCTCCCGTTTCAGAATCCGCTGTTTGAAATATTTCC
GAAACGACTTTCAGTAGTTTCGTTACCCATGGTGAAGTTCTGTCAAGTTTAGCAACTAAA
GAAGCTTCATAAAACATAGCACTTGGCAACTGCAAAACTTCTTGTAATGATCTATAGTTG
TGATTTAATTTTGTCACAAGTCTCGGATTAAATCCATCTGTTAAATTATAAGCGTCGTAA
TCTTTTTGGTACGGAAACATTTCCAGAATTCTAGATAAATATGACTCATCTAAGCCCAGT
TCTTTGCAATATTTCGACAAAATAACTGGGCCAAGCTGCTTTGGATCGCCGGCTAGAATT
ATTTGACTACTTTCTTTATCTGCTAGTATTAGAGGAATCATAACTTCTGGTTCCGTAGCC
TGACCTGCTTCGTCAACCACAATGTGTGTGAAATGTCCCTTTGGTAAATTTAGCTGTATC
AACCCACTGAGACAGTAGCAAGTGCCAATAGTGACACGATGTCTGCCAATAAACGAAGTG
CCTCTCGAATTTGTTCCTGATTCTATTTGTCTTCGTTTAGTATTTTCTGCTGATAAATCT
AAAGTTGAGCAAAAAGGCTTTATTGATTCTGGAAGATTATCAGAATTTACGAGGTGATGT
GCTATCAACCTCAAAATTGAATCCGAAAACATTTCTCTGTATTCAATAACTTTTTCAGTG
ATGAGGTTAGCGGCACTATTAGAAGGAGTGGCTACTAGAATTCTGCTATCAGGAAACTGT
GTCAATATTTGTAGAATTAATTCTGTTACAGTAACAGTTTTTCCAGTTCCTGGAGGTCCA
TATATGCAGTAAGGTAGCGGACGACATTCTCCCTGAAGGATGTTTAAAACGGCAGACTTT
TGGTAATCATTCAAATTTTTCTTGAACCATTTGATTGTACTTAGCCTTTTTTGACTAAGC
AGACATGAATGAGTAGAAACACGAGAAGGAAATAATACATCAGGACCCAATTTGGTAATT
GCGAAATTTATTGTTTGGTGGGCCCTTCTAAACATTGTCCTACTAAAATGAAATTCTATG
GACACATCACTCCCTGTATATGATTCATGAAATTTTTGATGAAATTTCATAAGGACTACA
TCTCCTTTAATGATATGTATGAAACCTTCATAGGCAGGTGCATTGCTATCCCAGATGTCT
TTGACTATTGCTTTATCCCCAAGCATTAAACTTGGTCTTTTTTCTGATAATTCTTTTATT
TCAACACCAAGATATTCTTGACACCTTATCAAAAAGACTTTGGACAAATCATACACTCGC
ATGTTTATATTCTGTTGTATCTCTTCCATATAGAGTAATGTATGCCATCTATCTGTATAA
TTATTAATATTCAAAGGCTGTAAAAGACAAGGCAGAAAACTTATAATTCTGTTTATAATT
TGATCAAAGTCTGGACTATATGCTGCTTGTTCGGAATCTCCTAGTACTGCCGCCCATACT
TTAGATGGAATAGCAAATGCGCCAAGTCGAACTGCCATAAAATTTGGAGGCTTCAATGGT
TTAACACCAGGCATGAATGCATTGTTGTTTTCTGATATTATCTCCTTCATTTTCGTTATG
CTCTCTTGCACTGTCTTCCTTTTATGTGGGGCATTTTTATTTAAAAACAGATCATTTACC
ACCTGAATATTAACATACCTATCTATCTGAAACCCTTTAAATAGAATTTTTATATGTTCC
CTAGTTTTACCTAAGAATTTTGGTCTGCATGTTATAGTCAAAGTAAACTTTTGCTGTGGG
TAAAGTCTCCAAGGTTTTGTTAAAATAGGCGTAAGATTTATTTGTGAGTTCTTTTTCTTA
TTGAGAACAATCCACTTATTAATGTAATGCATTTGGCCACTGTTGTTTAAAATAGTTATT
ACCATTGATTTTGATTCATTAAAATTTATATTTTCAAAATCTATTGGATGAGTGACACTT
ATCTGTTGTTCTTGTTCTATTATCAAACTGTTATTTTCTTCATCAATGTGAGTGTTATCA
ACATCTTCAATTAATTCACTAACTTGTATAGTTATTACTTTGGTAGCTCTCCATGTACAC
AATCCTTGATTGCTTTCAATAGCTTCTAACATCACATTATTCCCTTTTTGTGGTACACTC
CCATCTTGCATTGATTGTCTATTAAAATATATGTTTTTATCACATATTCCATAATCACCA
AACCATTCATCAATGATAACATTCTTGATTTTACTTCTCAAGGGCCTAATTGATTTCACT
TTTAAAACCTGGCTTGGAGAAATATCAGTGGGCTTTTCTTCATTCCACTGAACACTGCAT
TTCAACTCTAACCAGTCACCACTGACTGGAACTAAATTTGAAGCAACATCATCTAAGCTA
AATTTTATATCACTGTCTTTTATGTACACATATCTATTTTTTCTCTCATCAACTTCTCCA
ATCACTACATGTTCAATGATACCATAGACAGTTTCTTCAGATTCCTCTATATCTCTTCCA
CTGTCCCAAAATGCTCCTAAATTCTTTAATATTCTGACAACAACTGTAGAATCATTTTGG
TTTTTGTAACCAAGGTACAGAACTTGATCATTAAATTTTAAATCCAAAGTACAAGACTGA
GCATCAAAATACAGTGAATCGTCAATAACAATTTCTGAGGTATTTATGCAGGTTATGACT
CCTGTTTTTTGGAAGCAAACTGTATTTTTGGGAAATTCATGAGCTTCTGTTTTATTATCA
TATTCATTTTGAGTTTCATTAATTATTTCCAGATCCAACAATTGTTCTGCTAAAAAATCT
TCTTTTTCATTGTCATCTTCTTCAGAGTTTTTAGAAAACAAATATTTAAATAATGTAGAC
ATGTATGAAAACATTTTTCTTTTACTTCAACAATAACTATATAATGAAAATTAAATTTAT
GGCAGCGAGTTTTTATTGCGCAAATCCTTTATCATATTCGAATTCCCATTCTGTTGACTT
AATATATTCAAGTTCCTTTCTCAAAGTCTGTATTCTTTTCTGATGCATTTCTTTCTTTTC
ACAGAGTTTAGATTGCTCTATGCTGTGACCAAGGTGGACATGGTTTGATGATTGATCAAA
ATTTGGTATTCTGTTTTGTGTTGTTACTTGCGGAGTTTCTGCTTCAGATGAGGAATAGGT
AGATTGTGAAAGATTGCTAGATGTAGACATTACTAGTACAAAATACTACAAATCCTTTTC
TCATAAATTCACGTATTATGTGCATAGA
(3748 bp)

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