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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13090_c0_seq3
Scaffold_idBomo_Chr25
NCBI non-redundant
(nr)		transient_receptor_potential_channel_pyrexia_[Bombyx_mori]
Ontology
GO:0005216 F ion channel activity
GO:0005261 F cation channel activity
GO:0005262 F calcium channel activity
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006812 P cation transport
GO:0006816 P calcium ion transport
GO:0009408 P response to heat
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0034220 P ion transmembrane transport
GO:0034703 C cation channel complex
GO:0048060 P negative gravitaxis
GO:0050896 P response to stimulus
GO:0051290 P protein heterotetramerization
GO:0055085 P transmembrane transport
GO:0070588 P calcium ion transmembrane transport
GO:0098655 P cation transmembrane transport
Transcript
Level		FPKM:3.50 TPM:3.52
ORF EntryO_BomoSK12813_5prime_partial:A_BomoSK_comp13090_c0_seq3
Sequence
(Nucleotide)
GGGATGTCACGGATCCGAGTGGATTGTACCGAGAGCTTTCAGATTTCAGTAAAGCGCGGG
ATGGCGCCATGATACGCACTCACGCACAACGTTCCCGTAATGTATCGCCGTCTCATTGCT
CCAACAAAAATGACAAGAATAAAAAGGTGTGCCAGGAAGGTAGCGCGCGATGGTGTGGCG
GCATGAGTCAATTGCCGGAGGATGTAGAGGATGATGTCGAAGGAGGATACATATCTAGCG
ACGAGTCAGCACACGGCGCTGATCTCGCTGAGCGTCTGAGGGTCAAACCTTCTAAAGATA
TATGGGAACTGGACGAGATACAGTACACGTTACGGCTACTGCCGTATTCAGAAGAAATAT
CAGTACTTATAGGTAATGGGAATTACGATGAAACAATACAGTTTGCCTCCGAGGCTGAAG
GCGGATTTGGCCTACGAACAGCCATCCTTTGGGCCTGTTGGCTCGGAAAGAGTATTCTGC
TTTTTAAATTGCTAAAAATGGGCGTTGATCCCGATGAACTAGACGATGCCGGAAGGACAT
GTTTACATTTAAGTTGTTTAGTTGGAAGCGAAGAATGCGTGAAGCTTCTACTCGACCACG
GAGCGCACCCGAATACATGGGACTCGTCTACAGAAACAAAAGCGACGCCTCTCCATTGCG
CAGCCAGCGCCAAAAGTTTAGCTTGCGTAAAGGTGTTGATCGCTCATGGTGCTGACGTAA
ATGCCGGTTTAAGTGACAGGTCTCCGTTACATTACGCCGTCCTCAGCGATGCACCGGAAG
TTGTGAAGGAATTATTAGAAGCTGGTGCGTGCCCCGACACGCCACAGGTATTTACGGAAA
CACCTTTGCACGTAGCGGCATCGTTGGGGTCGGCTTCGTGCACTAAACTGTTGTTGAATG
CCGGTGCTGATGTCCGAGCGGCTATGGGCCCGGGGAAGGCCACGGCACTACATCTAGCCG
CCGAGGACGGTCACGCAGAATGCGCGCGCTTGTTACTCGATCACGGCGCACACATAGACT
GGCCCAATTTCAGGGGACAAACACCACTTCATCTCGCTACTTTAGCGCAGTCACTGGAAG
TGGTAGAGATGCTTGTAGACAGATGTGCCGATGTCCGTGCCAAGGACGCAGACGGCAGAA
CTCCTTTACACGGCGCGATCGTTAGAGGGGCTCGGGCTTGCGACATTGCCCGTTTACTTC
TCTCTGCAGGGGCCGATCCTAACGCTTCTGACAATTTCGGCTACACACCATTGCACATTG
CTGCACTGAATGAATTCTCGGCTTGCGTTCTATTGCTGTTAGATTACGGGGGCGACTTAA
CACTTCGAACAAACGGAGGCGTTTCAGCACTTTCTTTCATCGTACGAAGAGTGCCCGATG
TTATTCCTCGTTATTTGTGCAAGTTCGACGACGCTGTACACGTGAGCGAGCATGAGCTCG
GAGACGTGGACTGCGAGCTCACCATTGACTTCAGACCCCTCGTGCCGTGTCTAACGAGAG
GAGAAGCCGAACTATTGCTTGCATTTGTTGAGGTTGGACATAAAGACGTATTAAAACATC
CGGTGGCTGAAACGTTTCTGTTTTTGAAATGGCGCAGAATCAGAAAGTTTTTTGTATTAA
GCTTTATTTATCACGCTATATTCATAACTTTATACAGTCTTTATATTCTGCAAATATTCC
TATGTGAAAACGCTACGTGTAACGTGCCTTCTTATCTCCGCCCAGTTCAATATTTGATAC
TTATCTTGAACCTATGTTTTTTGGCCAAAGAAATATTTCAAGCATGTCAAGATTGGTCAG
CTTATATCCGACAGTGGGAAAACTGGTTGCAATGGCTAATTATCATAGGAGTGTTTTTGT
GTACGATACCGTACTGGGACGTAGACAATGGGGTTTTAAGAACAAACACAACGAACTGGC
AGCACGACGTGGCTGCAATTACCATATTTTTCTGTTGGCTGGAACTGATGATGATCATCG
GAAGGTTCCCTACTTTCGGTCTTTACGTCCAGATGTTTACTACAGTTACGGTTAATTTTG
CCACATTCCTCCTGGCGTACAGTTGTCTCCTCATTGCTTTTGGTCTAGCTTTTAGCGTGC
TGTTCAGCAACTACCCCGCATTCCATTTACCGGCTGGTTTAGTCAAAACGGTCATGATGA
TGTCAGGAGAGCTTGAATACGAGGATATATTCTACAACAACTGCACAAATTCCGAGATTT
ACTATCCTCTGACGGCACACATTATGTTCCTGATATTTGTACTACTTGTTACCGTTATAT
TGACAAACCTACTAGTTGGTTTGGCTGTTAGTGATATCCAGGCGTTACAAGAGGGTGCTG
GATTGGATCGGTTGGTGCGTCAAACACAATTGATAGCTCATCTCGAGGGAATGCTGTTCA
GCTCACTGTTATCATGTGCGCCTCAGCAGTTGCTGACTGTTTTACGTTGGGGAGCATTAC
TGACGGCGACGCACATGCGCACAATTAATATTAGACCGAACGATCCAAGAGAGAATAGAA
TACCGAAGGAATTCATATCAGCTATCTACAAGATGGTGGCAAGTCGAAAGAATACGAAAA
GAAGTGTACGAAAAAATAACAATTACGAATTTAGAATAAGGAGATGCCCGGAAGAGGAAA
CAATATCAAAACCAGAAATCGTTAAACGAAAAAGCAATTTATATGACAGATTCTCGTTTG
ATAGTCAACAGGTGGAAAGAAGGAAGCGACCTACTTCAGGATCAAATACTGACAGCAGGA
ACAGACCCCCTTCATTGACGATCAACGCTATACAGGAAATATGTATGGTTGATATAAAAA
CCCAACTTCTTGAACTAACAAAGAAAGTTAATAAATTACTTGAAGGTACAGAAGCAAGAT
TAAATCAAATCGAAAGCAAAGTAAACGGACAACTGCCGTAAAATGTTTCATTCAATGATG
CTG
(2943 bp)

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