SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13090_c0_seq2
Scaffold_idBomo_Chr25
NCBI non-redundant
(nr)		transient_receptor_potential_channel_pyrexia_[Bombyx_mori]
Ontology
GO:0005216 F ion channel activity
GO:0005261 F cation channel activity
GO:0005262 F calcium channel activity
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006812 P cation transport
GO:0006816 P calcium ion transport
GO:0009408 P response to heat
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0034220 P ion transmembrane transport
GO:0034703 C cation channel complex
GO:0048060 P negative gravitaxis
GO:0050896 P response to stimulus
GO:0051290 P protein heterotetramerization
GO:0055085 P transmembrane transport
GO:0070588 P calcium ion transmembrane transport
GO:0098655 P cation transmembrane transport
Transcript
Level		FPKM:0.90 TPM:0.90
ORF EntryO_BomoSK12812_complete:A_BomoSK_comp13090_c0_seq2
Sequence
(Nucleotide)
CCAAGTCTTCATGCCTCTTACACGGGAAGCGGTCTTGCAGTGATCTGTGCTAGTCTATTT
GCGTTTGTTTAGTATGAGTGATTCTGTTGGATGCCGTTTATTTCAGATTACGGGGGCGAC
TTAACACTTCGAACAAACGGAGGCGTTTCAGCACTTTCTTTCATCGTACGAAGAGTGCCC
GATGTTATTCCTCGTTATTTGTGCAAGTTCGACGACGCTGTACACGTGAGCGAGCATGAG
CTCGGAGACGTGGACTGCGAGCTCACCATTGACTTCAGACCCCTCGTGCCGTGTCTAACG
AGAGGAGAAGCCGAACTATTGCTTGCATTTGTTGAGGTTGGACATAAAGACGTATTAAAA
CATCCGGTGGCTGAAACGTTTCTGTTTTTGAAATGGCGCAGAATCAGAAAGTTTTTTGTA
TTAAGCTTTATTTATCACGCTATATTCATAACTTTATACAGTCTTTATATTCTGCAAATA
TTCCTATGTGAAAACGCTACGTGTAACGTGCCTTCTTATCTCCGCCCAGTTCAATATTTG
ATACTTATCTTGAACCTATGTTTTTTGGCCAAAGAAATATTTCAAGCATGTCAAGATTGG
TCAGCTTATATCCGACAGTGGGAAAACTGGTTGCAATGGCTAATTATCATAGGAGTGTTT
TTGTGTACGATACCGTACTGGGACGTAGACAATGGGGTTTTAAGAACAAACACAACGAAC
TGGCAGCACGACGTGGCTGCAATTACCATATTTTTCTGTTGGCTGGAACTGATGATGATC
ATCGGAAGGTTCCCTACTTTCGGTCTTTACGTCCAGATGTTTACTACAGTTACGGTTAAT
TTTGCCACATTCCTCCTGGCGTACAGTTGTCTCCTCATTGCTTTTGGTCTAGCTTTTAGC
GTGCTGTTCAGCAACTACCCCGCATTCCATTTACCGGCTGGTTTAGTCAAAACGGTCATG
ATGATGTCAGGAGAGCTTGAATACGAGGATATATTCTACAACAACTGCACAAATTCCGAG
ATTTACTATCCTCTGACGGCACACATTATGTTCCTGATATTTGTACTACTTGTTACCGTT
ATATTGACAAACCTACTAGTTGGTTTGGCTGTTAGTGATATCCAGGCGTTACAAGAGGGT
GCTGGATTGGATCGGTTGGTGCGTCAAACACAATTGATAGCTCATCTCGAGGGAATGCTG
TTCAGCTCACTGTTATCATGTGCGCCTCAGCAGTTGCTGACTGTTTTACGTTGGGGAGCA
TTACTGACGGCGACGCACATGCGCACAATTAATATTAGACCGAACGATCCAAGAGAGAAT
AGAATACCGAAGGAATTCATATCAGCTATCTACAAGATGGTGGCAAGTCGAAAGAATACG
AAAAGAAGTGTACGAAAAAATAACAATTACGAATTTAGAATAAGGAGATGCCCGGAAGAG
GAAACAATATCAAAACCAGAAATCGTTAAACGAAAAAGCAATTTATATGACAGATTCTCG
TTTGATAGTCAACAGGTGGAAAGAAGGAAGCGACCTACTTCAGGATCAAATACTGACAGC
AGGAACAGACCCCCTTCATTGACGATCAACGCTATACAGGAAATATGTATGGTTGATATA
AAAACCCAACTTCTTGAACTAACAAAGAAAGTTAATAAATTACTTGAAGGTACAGAAGCA
AGATTAAATCAAATCGAAAGCAAAGTAAACGGACAACTGCCGTAAAATGTTTCATTCAAT
GATGCTG
(1747 bp)

- SilkBase 1999-2023 -