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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13088_c0_seq1
Scaffold_idBomo_Chr1
NCBI non-redundant
(nr)		tudor_staphylococcus/micrococcal_nuclease_[Bombyx_mori]
Ontology
GO:0003676 F nucleic acid binding
GO:0004518 F nuclease activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016442 C RISC complex
GO:0031047 P gene silencing by RNA
GO:0042470 C melanosome
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:26.69 TPM:26.85
ORF EntryO_BomoSK12808_complete:A_BomoSK_comp13088_c0_seq1
Sequence
(Nucleotide)
GCGAATACAAACAAAAAACTTTGTTGATTTTTCCTAAAATATTTATTTTACCAAGTTCTT
TAACAATCCACGCACCTAATGGTACCCTACTGTTTGTAAACAAAATTAAAACATCTCCGA
CAGGAGAGGTAGGTTCATAAATATGAATTATAAGTACGAACTTTAAGGAAGCTAAAATGT
CTATAGAAATTGATACATTCCAAACACGATACATTAAGAATTAAATAAACATAGAAAATT
CAGACTTCTGATTATGCACAAGATACATGTTCTCACTAACTACAATGTCACATGATTATG
CTAATTTATTTGTTAAATTTATAACATTTTATGCAAAATACTTCATATTTTTTAAATTTT
TTTCATGAAGATTATAAACAAATTTCATCAAAGAAAGGAAATGGGATTATTTATTTTCAA
GAATATATTTTACTAAAAATGTATATTTAAAATAATATGAAATAACAATGAAATATAGAA
CTATTACATCAATCTACATACAATAAATTTCAATAAATCCTGATATACAAATCTGTAACA
CATTTATATTATGACCAACAACAGGCATTTATCAATAAATTCATTTATTTAAATAGTTAC
ATATTAATATATTAGTTTGTAGGTAATTAAGTATTTAAATCAGCGACCTATATAATTTAT
TTAATCTATTATAGTTATGAATCTGTTTTAATTTCTAAAATATGTTTGTAAATTTAAAAA
ATATGTTTTTATGAATTATGCTCGGTATGCTAGCGTGTAAGTGTTGCGGCACCCCTTCCG
CTGCCGTGTTCACTGCTCACCATCGTAATGTCCTCCGGCACAACACACGTATCGTAATTA
GCAATAATAAACTTCTGATTAATAAACAATTGTTCACAACATCCAAGTTTGAATTACATC
ATGATTTAAAGTTCATTGTTCAGTTTATAGTTCACAGTATGTGGTAAAGAATGGCGTGGA
CGATGCTGTCGACATCTACAGTGGTGCAGGTGGCACAGTTGCGGATGTGCGTGGGCGATG
TGGTGGCGTCAACGCCGGGGGCGTACAGCTAGCGACGCACCCCGAATTCTACCGCATCGT
CCTCGGTGATGTCACCGTGCCGCCACAAGTTGAGTCGCGAGCTCTTGGCGTGCTCCTGAG
CGGCGCGATACTCGGCCATCAATGTTGCCAGTCGGCTGTCACGAACCTGCTCCACTAACA
CGAGCCCATCTTTGATAAGGTTCTTGCCCAGATCAATGTTTGTGTTAGGATCAACAAGGG
TAACAGCAGCTGGTGATCCACGGATTTCTACATTCAAGAGCAGCCTCTTGCCAACGACAT
CATTATAGAAACTGGTTACAGCTTCTGCTCGGTCATCAGGGTCCGAGGGGAATTTCACAC
AGCAGAGAACATACTCTGTCGCAAAAGGCGAATCGTGCTCAGTACCCACCGGGAGTGCTG
CCAATCTGGTTATGTCTAACGTCTCTCGATTTCCATAGTCGATGTATACAACTTGGACCT
GCCTATTGTCTGTTATTTTTTCAATCTTTGCCCTGTACCATTGGTCATCGGCTGTAAAAC
GAGCAGCACAGATGGCTCCCTTCCTTGGAGCGTAAGATCCAGGCAATGGGTGACTGTTTC
TAAACTCAGTGTGTATAGTTTCCATAAGACTTTCTAGTTTCACACCTAAATCGACATTTT
GTGCGTAGAAATGACCTTCAGGAGTGACTTCAGTGATGACCACGCGGTCGTATTTAAGAG
TACGATCTTGTACGGTTGCATTTCTCTCCTTTTCGACTTCTTTTTCTTCTTCGACATAGT
CTTTCCATACGCCGATACGCTTTTTAATTGCATTCTCTTCAGCGGTTTTTATGGCGCGTG
CAAACTCAGACGTTTCCGCCGTGTGATGCGCCGAGGCAAGGCCATGTTCGACTAACGAAA
CGGACAAATTCTCGTTGTCAACCCAGAGCCAACCGATGAAGTTTCCTGCTTTGTCAATCT
CTTCTATGCTGACTAAGACGTCGTGCTGTAAGCACTTTTCTTTCGTGAACTGCAAAGCTT
CTTCTCCGAAAGGCTCTGCATTTTGTTTGGGTCCTCCGCCAATTGCAGGTCTCGCACCTC
GGGGACAGTTAATGCCGGCAAGCAAAAAGGTTACTAAGACGGATTCTTTAGGAATATATA
AACGCATACGCGATCCGCTAGCAACGAATTCCACAGTAGCCTCGGTTTTTTGGGCACGTT
TGAGGAATGGGAAGAATTTTTTTGCTTTCGTTGGATCTCCACTGGTGTCTTGCACACGGT
GGGTGGGCACTTCTTTCTTGTTATGAATACCAACTGCGGCCTTAACTGCTTTCAATTCAG
CCTCCAATAATTTATCATACTGTGAGCTTCTTTGGTCATTATCGTTTCTGTACTTCACTG
TTGCCAACCCTTTAGTCACCAGAGCTTCAGCTATGTTCGTGCCACCGCTTACGACAGTAC
AACATGTCTTTTCTGGGAAATTATCTTTTGCTGGCTGAATGTAATCTACTGTCACATTAA
CTTTTTTCCCAACCAGTTTTTTTCTAAGAAATTCACGTGCCTCGTACATCCATGGAATAT
CATACAAAGGTCTAAATCCTTTTGGCCTCGGTATAGGTTTATTGTCGTCGTCAGCATTGC
TCTTTTCACGAGGAGGCCTGACGCTAGCTAAGAATATTTTTTTCTGTACATTGCTATGTG
TTTTAACAACGAGCGCGTCTCCGTTGACTACTTCCAACACGGTGGCCGTGAATTCCTTGT
CTTTCGCCGGGATTATAGGTGCATTGCTTACATAATTTATCCATATGCGCAGTTTTGCTT
CCTTAGCTGCACTTTCGGCGGCTTTCAATGTAGATGCACCTGATTTCATGACACATTTCG
CGAACCCTTGTCTTAGTAGGGCCTCAGCGATGTTACCCTGCGGGTGCAGTATCGTGCCCA
CGATATTGTTGTTATTAACGGACTCCAGAACTACTTCGACGTCTTTCTGCAGCAATCTGG
ACTCCAGGAAGAAGCGTGCTTCTTCTGCGTAAGGCTCAGATTCACCGTCTTGTCTTACAG
CGGGACATCGAATTCCAGATAGCATCAGTGTAATGGGAGTGTATTCAGGTAACAAACAAA
GACGTACTGTAGAACCATCACGCACATATTCAATGATAGCCTTTACAGGCTTACCATTGT
ATTTGTTGACGAAAGCTTTCAGATTTTCGATAGACCACTTGATGTCTCGTACATGTTTAT
CAGCATCAGTACTCCAAATTCCTTTGCCTTGCGATTTGGCTGTCTCTTCGATCTCTACCA
GCTTTTTGAGCTGAGGTATATTTCTAGCACCTTCTCGAACTTTAACGAGACCTTCAGCCA
GCAAGGCTTCAGTAACATTTTCATCTTTGGAAGGATTTTTGCCAGCCCATACGACGCCAT
ATTCTCTATTCGCTGAATTCGCCGGTTTCTCAGCAGTGAAGATAACCTCCTTGCCGACTA
GCTTCTTCCTTAGGAATTCACGGGCTTCCCACGCGAATGGTTCATCCTTCGTTTCTGTGT
CATTGTTGGCGGTCCTTTGGCGAGCGAGTTTAGGTGCGGTGATACCCGAAAGGGCTATCA
CTTTCTCTGGAGGCGGCCCGCCCTGAGGCTGTTTTCTTATTACCACCGTATCTCCCGATA
GTACCTGCTTCACTATTCCTATTTTGTAAGCAGGTGCCGGTGCTGGAGCACTCATTTTCG
ATGAAAATAGTTCTGATATCCTGTTTTGTAGGATACGAGTCTGAAATTACTGACGAGCGT
TCAACTAGTAAGACGACACAAAACTCTCAGAGAAGTGAGACAGGCGAAACGTGGCGGTAC
CGGGTTGTTAATG
(3853 bp)

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