SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13067_c0_seq6
Scaffold_idBomo_Chr24
NCBI non-redundant
(nr)		PREDICTED:_pleckstrin_homology-like_domain_family_B_member_1_[Papilio_polytes]
Ontology
GO:0000226 P microtubule cytoskeleton organization
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0010470 P regulation of gastrulation
GO:0010717 P regulation of epithelial to mesenchymal transition
GO:0016020 C membrane
GO:0031252 C cell leading edge
GO:0045111 C intermediate filament cytoskeleton
GO:0045180 C basal cortex
GO:0045184 P establishment of protein localization
GO:0051497 P negative regulation of stress fiber assembly
GO:0051895 P negative regulation of focal adhesion assembly
GO:0070507 P regulation of microtubule cytoskeleton organization
GO:1903690 P negative regulation of wound healing, spreading of epidermal cells
GO:1904261 P positive regulation of basement membrane assembly involved in embryonic body morphogenesis
Transcript
Level		FPKM:1.67 TPM:1.68
ORF EntryO_BomoSK12755_complete:A_BomoSK_comp13067_c0_seq6
Sequence
(Nucleotide)
GTTCGGGTGATCGCTTCGTTTCCCCGAGATTTCGGCGGGAAAATAACGCGATATGTGCAA
AGGCTGTAGGGAATAAATTCCTTTGGTTTAAAGTCCAATAAAAAAATATATTTGTGGACG
TTAAAATATTAAATTTGAAATCAACAAAATTAAATAACAGTGATCGACAATTTGTTGAAT
GTTTAGAATCAAATAAAACAAAATTATTTAAATAGCATCTGTAACGTATCTGTTACGTAT
TTCTCAACATTGTACGAATAATATGCTTTTCTACATAAACCAACCCAAATAACAAATCAA
AAATAATGATTATCAGTAATGAATTAAAATTTATAGTGAACTAGATACTTTAAACTGATA
AATGTAGTGAGTGACATTATGTCTGTCTGGTTGACTCTGATAAAGAGTTCGCATTGGGGC
ATCAGCTGCACTCCTAAACCGGTACTTTTGCAAGTCAGAAATTCTCGCACCGAATCAACT
GAGGAAGACAAACGCAGCGATGACAGTCGTCCGCTCAGCCACGCGTCTGACTTCAGCAGG
GACAATATTTTGTCGCTTAGCAACGCGCCACGCCGCAGCCGACGCGGCATCGCACCCTAC
AGCGAGTCGCAGAGGCCCCTCACGCGGTACCTGCCCGTCGACAGGGAAGACTTCGATCTG
CGGAGACACGTCGAGTCTGCTGGCCACCAAGTCGAACTCTGCCCCTACGTGAGCGTGACT
TCGAGTTCGTGCCGCGGGTATTTACATAAACTGGGCGCCAAGTTTCACACGTGGTCCAAA
AGATGGTTCGTTTTCGACAGAGAAACGAAAACCTTCGTATACTACTGGGACAAGAGTGAG
AAGAAACCCAGGGGCGGTGCTTATTTCCAAGTGATAGAAGAAGTGTATTTAGATCACGGC
AACACGTCGAAATCGCCGAACCCACAGACGACGTTCATAGTCAAAACTAGACAAAGACGC
TACTACTTAATGGCTCCGTCCGGGGAAGCAGCCCGGATATGGATCGATGTGCTATTCACC
GGCGCCCAGGGATACACCGAATACCTCGAGTGACAGCGACCATCGATTGACAGATGTCAA
ATCTGACGTCTGTCAAACGTGCTGTACGATCATTTCGGTACTTTTTGGTCGCCGATTATT
ATTATTTTAGGGACCGTTCTGAAAGCGAAAGAACAATAGAATTGAATTAAAATAAAGTTT
TGTCAATTTCGAAAACGACTTAAATTTTTACAATACGTCAATTAATGCATTTGTGTTTGA
ATATGTAGCAACACTACGGTGTTGCATTATATCGATACAAATTTTCCAATTGTGTAGTGG
GTGTTTAAGAAAAAGCGCCTTATGTTTGTTTGATTCCTGAACGAATATAGTCTTAATGTA
ATTATAATGTGTTAATGCATTCTCGTGAGTACACATTAAGTGCGTAAGTGGGTAAAATGT
ATAGGTTTCTAAACAAACAGACAAACGAATCAGTATTTTTTTTAAATAAGTACGTTTTAT
ATAAAACACATATAAATTTATATGTATTTATATATATTTACACACAAAACAATCGTGCCA
ATTATATTGTACAAATAACGTGGGAACGTATATTTTTATATGTGAATCTTAAAGTCGCAT
TATATCTGGATTCTTATACGACATAAATAAATAAATAAAAACAAGATGTCGATGCGAAAT
ACAAATTTCATATAACTCTTAAACCGCTTACAAAGTTTAATTCAAAACATTTAGTACAAT
ATTTTATTAAGACATGTGTCGATCAAACATCTAGTCGGTAAAGTTCGCCGACTTTTCATA
TATATTATATACATTACATTATGTATAACTATTTTTTATATAACACGTATTTTAGTAAAT
AATCGGATTCATAGGTGCCTTCTAATAAGACTGAACAAAAATTAACGAAGACAACATGTT
TGTCAAATGTAGTCGTAGTTGTGATAAAATAAAAAAACCCTTTGCCGGTACAAAATAAAA
GTGTTTCAAAATAATAAATACAGATATATGTAGTAATCTATGTATTTATACAACAATGAT
ATATTTTTTAAATAAATATTTTTAAAACAAATAAACAAAAAAATTAACTATATTGATTTA
TATTTATAAATCTATAAAGGAATCATCATAAATAAATGTTTCTAAAAATCTGTATGTTTG
TAGATTTATGTTTGCTGAACTTTTAAACGATCGTTGCTTAATTAAATCAACGCTTTATGT
AATGTTACCATTTTATTGTATTTATTTATAAAAGGCAACTTTACATTGTCGTTTTAACTA
TCCTATTGCATCATGAAAATTTACGTTGTATTTAAATTGAATTACAATTTAGGAATTTTA
TAATTTTAAAAATGGCAACTCTAGTTACTTTAACGCGAAACTATAATAGTTAATTTGCCT
GTTTTAATTATCATTAATTATTTTTGTAATTTAATGCTATTCAGATTATACCAATATGCA
TGTACTTTTAATTATTTTCTGGTTTAAGTACCTACTAAAATGTGATGATTTACAGAATGT
CGTACCAGTGTAAAAATATCGATTATTTTTTTTGTAGCTTGCAACATTGTAACATAGTTT
TAGTTGAAACGCCTGATACCAACTTTATTTTATTCGATAAGGTCACATTATCATTATTAA
TCATCGTGAGA
(2651 bp)

- SilkBase 1999-2023 -