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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13067_c0_seq5
Scaffold_idBomo_Chr24
NCBI non-redundant
(nr)		PREDICTED:_pleckstrin_homology-like_domain_family_B_member_1_[Bombyx_mori]
Ontology
GO:0000226 P microtubule cytoskeleton organization
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0010470 P regulation of gastrulation
GO:0010717 P regulation of epithelial to mesenchymal transition
GO:0016020 C membrane
GO:0031252 C cell leading edge
GO:0045111 C intermediate filament cytoskeleton
GO:0045180 C basal cortex
GO:0045184 P establishment of protein localization
GO:0051497 P negative regulation of stress fiber assembly
GO:0051895 P negative regulation of focal adhesion assembly
GO:0070507 P regulation of microtubule cytoskeleton organization
GO:1903690 P negative regulation of wound healing, spreading of epidermal cells
GO:1904261 P positive regulation of basement membrane assembly involved in embryonic body morphogenesis
Transcript
Level		FPKM:1.11 TPM:1.12
ORF EntryO_BomoSK12754_complete:A_BomoSK_comp13067_c0_seq5
Sequence
(Nucleotide)
CAGGACGAACGTGTTTGTGTTTGTCGATAGTGATTCGTTTTGTGATTTTGATGCTGTACG
GGAACGCGTTCGGAGATTTTCACATACCACCCTGTGAATAGATAAAGCCCTATAACAATC
CATCCATAAGGTCGGGTCAGCCAAAACCGCAGACCACCCGTTCAGTGTATTGACAAACGG
ATTGACAACGGATTGTACGGATTTAATTAGTCAATTCAACCACAAAGTACATAAATTTAG
TAATATCGATACGACTAGTTGTCAGATAAAAGACAATAAAAAAAATATGCTAAGTTAGTA
AGTGAGTGATACCAATAAAATGATTGGAAGGCCGAAAGAGAAGCAGGACAGTCTCTGGTG
TTGTTCGGGCTTGTTCTCATCGTCGATTGAAGAGTTGCAAGTCAGAAATTCTCGCACCGA
ATCAACTGAGGAAGACAAACGCAGCGATGACAGTCGTCCGCTCAGCCACGCGTCTGACTT
CAGCAGGGACAATATTTTGTCGCTTAGCAACGCGCCACGCCGCAGCCGACGCGGCATCGC
ACCCTACAGCGAGTCGCAGAGGCCCCTCACGCGGTACCTGCCCGTCGACAGGGAAGACTT
CGATCTGCGGAGACACGTCGAGTCTGCTGGCCACCAAGTCGAACTCTGCCCCTACGTGAG
CGTGACTTCGAGTTCGTGCCGCGGGTATTTACATAAACTGGGCGCCAAGTTTCACACGTG
GTCCAAAAGATGGTTCGTTTTCGACAGAGAAACGAAAACCTTCGTATACTACTGGGACAA
GAGTGAGAAGAAACCCAGGGGCGGTGCTTATTTCCAAGTGATAGAAGAAGTGTATTTAGA
TCACGGCAACACGTCGAAATCGCCGAACCCACAGACGACGTTCATAGTCAAAACTAGACA
AAGACGCTACTACTTAATGGCTCCGTCCGGGGAAGCAGCCCGGATATGGATCGATGTGCT
ATTCACCGGCGCCCAGGGATACACCGAATACCTCGAGTGACAGCGACCATCGATTGACAG
ATGTCAAATCTGACGTCTGTCAAACGTGCTGTACGATCATTTCGGTACTTTTTGGTCGCC
GATTATTATTATTTTAGGGACCGTTCTGAAAGCGAAAGAACAATAGAATTGAATTAAAAT
AAAGTTTTGTCAATTTCGAAAACGACTTAAATTTTTACAATACGTCAATTAATGCATTTG
TGTTTGAATATGTAGCAACACTACGGTGTTGCATTATATCGATACAAATTTTCCAATTGT
GTAGTGGGTGTTTAAGAAAAAGCGCCTTATGTTTGTTTGATTCCTGAACGAATATAGTCT
TAATGTAATTATAATGTGTTAATGCATTCTCGTGAGTACACATTAAGTGCGTAAGTGGGT
AAAATGTATAGGTTTCTAAACAAACAGACAAACGAATCAGTATTTTTTTTAAATAAGTAC
GTTTTATATAAAACACATATAAATTTATATGTATTTATATATATTTACACACAAAACAAT
CGTGCCAATTATATTGTACAAATAACGTGGGAACGTATATTTTTATATGTGAATCTTAAA
GTCGCATTATATCTGGATTCTTATACGACATAAATAAATAAATAAAAACAAGATGTCGAT
GCGAAATACAAATTTCATATAACTCTTAAACCGCTTACAAAGTTTAATTCAAAACATTTA
GTACAATATTTTATTAAGACATGTGTCGATCAAACATCTAGTCGGTAAAGTTCGCCGACT
TTTCATATATATTATATACATTACATTATGTATAACTATTTTTTATATAACACGTATTTT
AGTAAATAATCGGATTCATAGGTGCCTTCTAATAAGACTGAACAAAAATTAACGAAGACA
ACATGTTTGTCAAATGTAGTCGTAGTTGTGATAAAATAAAAAAACCCTTTGCCGGTACAA
AATAAAAGTGTTTCAAAATAATAAATACAGATATATGTAGTAATCTATGTATTTATACAA
CAATGATATATTTTTTAAATAAATATTTTTAAAACAAATAAACAAAAAAATTAACTATAT
TGATTTATATTTATAAATCTATAAAGGAATCATCATAAATAAATGTTTCTAAAAATCTGT
ATGTTTGTAGATTTATGTTTGCTGAACTTTTAAACGATCGTTGCTTAATTAAATCAACGC
TTTATGTAATGTTACCATTTTATTGTATTTATTTATAAAAGGCAACTTTACATTGTCGTT
TTAACTATCCTATTGCATCATGAAAATTTACGTTGTATTTAAATTGAATTACAATTTAGG
AATTTTATAATTTTAAAAATGGCAACTCTAGTTACTTTAACGCGAAACTATAATAGTTAA
TTTGCCTGTTTTAATTATCATTAATTATTTTTGTAATTTAATGCTATTCAGATTATACCA
ATATGCATGTACTTTTAATTATTTTCTGGTTTAAGTACCTACTAAAATGTGATGATTTAC
AGAATGTCGTACCAGTGTAAAAATATCGATTATTTTTTTTGTAGCTTGCAACATTGTAAC
ATAGTTTTAGTTGAAACGCCTGATACCAACTTTATTTTATTCGATAAGGTCACATTATCA
TTATTAATCATCGTGAGA
(2598 bp)

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