SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13067_c0_seq2
Scaffold_idBomo_Chr24
NCBI non-redundant
(nr)		PREDICTED:_pleckstrin_homology-like_domain_family_B_member_1_[Papilio_polytes]
Ontology
GO:0000226 P microtubule cytoskeleton organization
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0010470 P regulation of gastrulation
GO:0010717 P regulation of epithelial to mesenchymal transition
GO:0016020 C membrane
GO:0031252 C cell leading edge
GO:0045111 C intermediate filament cytoskeleton
GO:0045180 C basal cortex
GO:0045184 P establishment of protein localization
GO:0051497 P negative regulation of stress fiber assembly
GO:0051895 P negative regulation of focal adhesion assembly
GO:0070507 P regulation of microtubule cytoskeleton organization
GO:1903690 P negative regulation of wound healing, spreading of epidermal cells
GO:1904261 P positive regulation of basement membrane assembly involved in embryonic body morphogenesis
Transcript
Level		FPKM:2.89 TPM:2.91
ORF EntryO_BomoSK12749_complete:A_BomoSK_comp13067_c0_seq2
Sequence
(Nucleotide)
GTTCGGGTGATCGCTTCGTTTCCCCGAGATTTCGGCGGGAAAATAACGCGATATGTGCAA
AGGCTGTAGGGAATAAATTCCTTTGGTTTAAAGTCCAATAAAAAAATATATTTGTGGACG
TTAAAATATTAAATTTGAAATCAACAAAATTAAATAACAGTGATCGACAATTTGTTGAAT
GTTTAGAATCAAATAAAACAAAATTATTTAATGAATTAAAATTTATAGTGAACTAGATAC
TTTAAACTGATAAATGTAGTGAGTGACATTATGTCTGTCTGGTTGACTCTGATAAAGAGT
TCGCATTGGGGCATCAGCTGCACTCCTAAACCGGTACTTTTGCAAGTCAGAAATTCTCGC
ACCGAATCAACTGAGGAAGACAAACGCAGCGATGACAGTCGTCCGCTCAGCCACGCGTCT
GACTTCAGCAGGGACAATATTTTGTCGCTTAGCAACGCGCCACGCCGCAGCCGACGCGGC
ATCGCACCCTACAGCGAGTCGCAGAGGCCCCTCACGCGGTACCTGCCCGTCGACAGGGAA
GACTTCGATCTGCGGAGACACGTCGAGTCTGCTGGCCACCAAGTCGAACTCTGCCCCTAC
GTGAGCGTGACTTCGAGTTCGTGCCGCGGGTATTTACATAAACTGGGCGCCAAGTTTCAC
ACGTGGTCCAAAAGATGGTTCGTTTTCGACAGAGAAACGAAAACCTTCGTATACTACTGG
GACAAGAGTGAGAAGAAACCCAGGGGCGGTGCTTATTTCCAAGTGATAGAAGAAGTGTAT
TTAGATCACGGCAACACGTCGAAATCGCCGAACCCACAGACGACGTTCATAGTCAAAACT
AGACAAAGACGCTACTACTTAATGGCTCCGTCCGGGGAAGCAGCCCGGATATGGATCGAT
GTGCTATTCACCGGCGCCCAGGGATACACCGAATACCTCGAGTGACAGCGACCATCGATT
GACAGATGTCAAATCTGACGTCTGTCAAACGTGCTGTACGATCATTTCGGTACTTTTTGG
TCGCCGATTATTATTATTTTAGGGACCGTTCTGAAAGCGAAAGAACAATAGAATTGAATT
AAAATAAAGTTTTGTCAATTTCGAAAACGACTTAAATTTTTACAATACGTCAATTAATGC
ATTTGTGTTTGAATATGTAGCAACACTACGGTGTTGCATTATATCGATACAAATTTTCCA
ATTGTGTAGTGGGTGTTTAAGAAAAAGCGCCTTATGTTTGTTTGATTCCTGAACGAATAT
AGTCTTAATGTAATTATAATGTGTTAATGCATTCTCGTGAGTACACATTAAGTGCGTAAG
TGGGTAAAATGTATAGGTTTCTAAACAAACAGACAAACGAATCAGTATTTTTTTTAAATA
AGTACGTTTTATATAAAACACATATAAATTTATATGTATTTATATATATTTACACACAAA
ACAATCGTGCCAATTATATTGTACAAATAACGTGGGAACGTATATTTTTATATGTGAATC
TTAAAGTCGCATTATATCTGGATTCTTATACGACATAAATAAATAAATAAAAACAAGATG
TCGATGCGAAATACAAATTTCATATAACTCTTAAACCGCTTACAAAGTTTAATTCAAAAC
ATTTAGTACAATATTTTATTAAGACATGTGTCGATCAAACATCTAGTCGGTAAAGTTCGC
CGACTTTTCATATATATTATATACATTACATTATGTATAACTATTTTTTATATAACACGT
ATTTTAGTAAATAATCGGATTCATAGGTGCCTTCTAATAAGACTGAACAAAAATTAACGA
AGACAACATGTTTGTCAAATGTAGTCGTAGTTGTGATAAAATAAAAAAACCCTTTGCCGG
TACAAAATAAAAGTGTTTCAAAATAATAAATACAGATATATGTAGTAATCTATGTATTTA
TACAACAATGATATATTTTTTAAATAAATATTTTTAAAACAAATAAACAAAAAAATTAAC
TATATTGATTTATATTTATAAATCTATAAAGGAATCATCATAAATAAATGTTTCTAAAAA
TCTGTATGTTTGTAGATTTATGTTTGCTGAACTTTTAAACGATCGTTGCTTAATTAAATC
AACGCTTTATGTAATGTTACCATTTTATTGTATTTATTTATAAAAGGCAACTTTACATTG
TCGTTTTAACTATCCTATTGCATCATGAAAATTTACGTTGTATTTAAATTGAATTACAAT
TTAGGAATTTTATAATTTTAAAAATGGCAACTCTAGTTACTTTAACGCGAAACTATAATA
GTTAATTTGCCTGTTTTAATTATCATTAATTATTTTTGTAATTTAATGCTATTCAGATTA
TACCAATATGCATGTACTTTTAATTATTTTCTGGTTTAAGTACCTACTAAAATGTGATGA
TTTACAGAATGTCGTACCAGTGTAAAAATATCGATTATTTTTTTTGTAGCTTGCAACATT
GTAACATAGTTTTAGTTGAAACGCCTGATACCAACTTTATTTTATTCGATAAGGTCACAT
TATCATTATTAATCATCGTGAGA
(2543 bp)

- SilkBase 1999-2023 -