SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13019_c0_seq2
Scaffold_idBomo_Chr18
NCBI non-redundant
(nr)		PREDICTED:_zinc_finger_CCCH_domain-containing_protein_14_isoform_X2_[Bombyx_mori]
Ontology
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0008143 F poly(A) binding
GO:0016607 C nuclear speck
GO:0043488 P regulation of mRNA stability
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:1900364 P negative regulation of mRNA polyadenylation
Transcript
Level		FPKM:0.62 TPM:0.62
ORF EntryO_BomoSK12624_complete:A_BomoSK_comp13019_c0_seq2
Sequence
(Nucleotide)
CGCGCGGGTGCATGAAGGCGCCCGGCGCGCCGGATCTACACATCGGGAACGCCTTGCACC
ATATCGGCTTGCGTTCCGCTTGGGACAGTGGTGGAACTGCATCGTATTTATGTGTGTTAT
TAGTGGTGACCACGATATGACTGTCACTACTGGCACTTTCCGTTCTCTGTCTCTCTTCTT
TTTCGACGACTTTCTCTTTCTTCGACACGTCGAATACAATAGGAGAGGCCTTTCTTTTCC
TAACAGGAGGCGACAGATCTTTTAGCATTTCCGTGGTTATCCTTTTAGCGAGTACTTCTT
CGGTTTTTATCTTGGCTTCTGTCGCGTCATCTTTTGTAGCACTGAGACGTTTTACTGGCG
TATCTTCGTCTGTATTTTCAGCGGGTTCAAGTTCAATTTCGTCTGATTTTTCTTCTTTAG
TAACGTTAGCTTCCACTGGAGGTTCTTTGGATTCTTTCGTTTTATTGGCTTCTTCATCGT
TCAAGATGCCCTCGTCGAGAAGTTTCTTTTTCAAAAACGAGTTCGGATGGTAACCGTCCA
TAGTGACTATGAACTGCGTACTTTTGTCTTTGTCTACGGTTGGATTGTGAATATTTATTG
TTTCAATGATAAGCGTGTCGTTTTTTTTCGTGGAGATCCTTCCTTCGAATCGCCTCGAAG
GTACGTATTCGGTGTTTTTTATTTTCTTCGTTATCGAAGCCGGTACATACTCTTCTTTGT
CAACGTCACTCGGCGCTCTGGAGCTCTCATCATCATTGCTGTCCATTTCGAGGCTTATGA
CGTCAGCGTTCCTGTCAGCATCGTCAGCATCGGCAGCGGGACCGCCCGCCGGCACTTGGA
TGACAATGTTCTGCGCGTCCATCCGACGCATGGGCAGTACTAGGGCCCGTTTCACTTTCT
GTGAATCCGCTTCTATTTTAGGGGGAATATTTAATAAGCTCTTATGAGCATCAGCTACGG
CTTTCATGAGCAGGCTGGAGGCAGTGGCGGCGACACGCGGCCGCGGGCGCACCCGCACTA
CGCTTGTGCACGACGAACGGACAGGACGATTCTCCAACACCGATATTCTGGAAGTGATCT
TTTTAGAACTACTTTCAGTATTACGTTGACCTGCTTCATCGGAGTCTGACTTCCTTTTTT
GGGATGCAGGCTGATCGTTGTATGTAATCTTTGTTGGTTTTTGAGGTGGTTCCGGTTCTG
GTGTGAACCTTTCCGGACTCTTCTGTTTTTTCTCTGTCTCTTTAGATTCGACCTTTCTGG
TTATATCTCTACTAATTCGATCTCTTGCAGGCCTCTTGGGTAGCTTTAGTTCAAATTGGG
GTAACAATTCAACAGTTTCTGCACTGCGATTTGGAGTAGGGGGAACAGGTTCAACCATTT
TCCGTGGTGATGTAAGTTTCTTTTGCAGCGGTGGAGTCTTTGGGATGGACTGTGAGACTT
CCTGAAAGACTTCATCGGCAAAATCATTCATTAGCTCATCAGCTTCCGTCCTTATATTTA
AAAAGTCTTCATCATCATCTGACATAGAATCCAACTGTTCCACTAATTTTTGCTTTAGTC
CCTGTATTTTGACTTCAATCTCATTGATTTCTTTAATTTGTTCATCTCTATTCGCAGACG
ATTCCGTTGATTTTTCAACCACTTCTTCCACAATCTTAGTAGATTCAGATGTAGAAGAAA
GATTTTGTTCAGATGAAATTGTTGCTAAATCAATTACAGGTACGACTGGCTTTTTGCTTT
CTTTAACTGTAGACTTAGTTTCATTTTTTTCATCCTGGCTTTGTGGTTCTATTAATACAC
CGTGGTTTTTTAGTATCTGGCCAGCAAAGACATCAGTTATTGATGGCTCTGAATTCTTTT
CCATGTTCATCAGCAATGGAGGTATATTTGGTCTTATTATATCGTGATGTTTGCTTTTCT
TTTTCTTGTGAGCTTTCTTGATTTCTTTCTTATGAATTTCTTTTTCTTTAACTTTCTTTT
TGGATTTTTTTGAGTCACTCTTTTTCGATTTTTCTTTTGCTTTCTTTTCTTTCGGCTTGC
GGTCTTTGGACACGGATCTTTCTTTGCTCTTCTCTCTTTCAACTGTTATTGGGGCAGTGA
CTGAAACTTGTTGTAGCTTTTTGAGAACTTGGTGAAGCCAATTCACAAAGAGTTCAGTAT
TGTCTCCAAGGAACAATTGAAGATCTTCTTCCATCTGCCCACGAGTGCGCTTGTTTGCTA
CCATCACCATGACATAGTCGGGTAGCTCATCATCTACATAACAGCCCAGTTCGGTCAGCT
TAGCCTTGATAGCAGACCGCATTTTCTGGCCTATTTCACTTCCTACGACGTCCATTGTTT
TAATACAGTACACAAAAATAAGCAAATATTTTTTTAAACACACACAAATGTTCTTAAAAT
CTATATGTATAATATTACTTTTAACTAGCAGAAATCACAAATTAA
(2445 bp)

- SilkBase 1999-2023 -