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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13019_c0_seq1
Scaffold_idBomo_Chr18
NCBI non-redundant
(nr)		PREDICTED:_zinc_finger_CCCH_domain-containing_protein_14_isoform_X2_[Bombyx_mori]
Ontology
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0008143 F poly(A) binding
GO:0016607 C nuclear speck
GO:0043488 P regulation of mRNA stability
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:1900364 P negative regulation of mRNA polyadenylation
Transcript
Level		FPKM:5.39 TPM:5.42
ORF EntryO_BomoSK12621_complete:A_BomoSK_comp13019_c0_seq1
Sequence
(Nucleotide)
CCTCAATATTTACTTACGTGGTGGAACTGCATCGTATTTATGTGTGTTATTAGTGGTGAC
CACGATATGACTGTCACTACTGGCACTTTCCGTTCTCTGTCTCTCTTCTTTTTCGACGAC
TTTCTCTTTCTTCGACACGTCGAATACAATAGGAGAGGCCTTTCTTTTCCTAACAGGAGG
CGACAGATCTTTTAGCATTTCCGTGGTTATCCTTTTAGCGAGTACTTCTTCGGTTTTTAT
CTTGGCTTCTGTCGCGTCATCTTTTGTAGCACTGAGACGTTTTACTGGCGTATCTTCGTC
TGTATTTTCAGCGGGTTCAAGTTCAATTTCGTCTGATTTTTCTTCTTTAGTAACGTTAGC
TTCCACTGGAGGTTCTTTGGATTCTTTCGTTTTATTGGCTTCTTCATCGTTCAAGATGCC
CTCGTCGAGAAGTTTCTTTTTCAAAAACGAGTTCGGATGGTAACCGTCCATAGTGACTAT
GAACTGCGTACTTTTGTCTTTGTCTACGGTTGGATTGTGAATATTTATTGTTTCAATGAT
AAGCGTGTCGTTTTTTTTCGTGGAGATCCTTCCTTCGAATCGCCTCGAAGGTACGTATTC
GGTGTTTTTTATTTTCTTCGTTATCGAAGCCGGTACATACTCTTCTTTGTCAACGTCACT
CGGCGCTCTGGAGCTCTCATCATCATTGCTGTCCATTTCGAGGCTTATGACGTCAGCGTT
CCTGTCAGCATCGTCAGCATCGGCAGCGGGACCGCCCGCCGGCACTTGGATGACAATGTT
CTGCGCGTCCATCCGACGCATGGGCAGTACTAGGGCCCGTTTCACTTTCTGTGAATCCGC
TTCTATTTTAGGGGGAATATTTAATAAGCTCTTATGAGCATCAGCTACGGCTTTCATGAG
CAGGCTGGAGGCAGTGGCGGCGACACGCGGCCGCGGGCGCACCCGCACTACGCTTGTGCA
CGACGAACGGACAGGACGATTCTCCAACACCGATATTCTGGAAGTGATCTTTTTAGAACT
ACTTTCAGTATTACGTTGACCTGCTTCATCGGAGTCTGACTTCCTTTTTTGGGATGCAGG
CTGATCGTTGTATGTAATCTTTGTTGGTTTTTGAGGTGGTTCCGGTTCTGGTGTGAACCT
TTCCGGACTCTTCTGTTTTTTCTCTGTCTCTTTAGATTCGACCTTTCTGGTTATATCTCT
ACTAATTCGATCTCTTGCAGGCCTCTTGGGTAGCTTTAGTTCAAATTGGGGTAACAATTC
AACAGTTTCTGCACTGCGATTTGGAGTAGGGGGAACAGGTTCAACCATTTTCCGTGGTGA
TGTAAGTTTCTTTTGCAGCGGTGGAGTCTTTGGGATGGACTGTGAGACTTCCTGAAAGAC
TTCATCGGCAAAATCATTCATTAGCTCATCAGCTTCCGTCCTTATATTTAAAAAGTCTTC
ATCATCATCTGACATAGAATCCAACTGTTCCACTAATTTTTGCTTTAGTCCCTGTATTTT
GACTTCAATCTCATTGATTTCTTTAATTTGTTCATCTCTATTCGCAGACGATTCCGTTGA
TTTTTCAACCACTTCTTCCACAATCTTAGTAGATTCAGATGTAGAAGAAAGATTTTGTTC
AGATGAAATTGTTGCTAAATCAATTACAGGTACGACTGGCTTTTTGCTTTCTTTAACTGT
AGACTTAGTTTCATTTTTTTCATCCTGGCTTTGTGGTTCTATTAATACACCGTGGTTTTT
TAGTATCTGGCCAGCAAAGACATCAGTTATTGATGGCTCTGAATTCTTTTCCATGTTCAT
CAGCAATGGAGGTATATTTGGTCTTATTATATCGTGATGTTTGCTTTTCTTTTTCTTGTG
AGCTTTCTTGATTTCTTTCTTATGAATTTCTTTTTCTTTAACTTTCTTTTTGGATTTTTT
TGAGTCACTCTTTTTCGATTTTTCTTTTGCTTTCTTTTCTTTCGGCTTGCGGTCTTTGGA
CACGGATCTTTCTTTGCTCTTCTCTCTTTCAACTGTTATTGGGGCAGTGACTGAAACTTG
TTGTAGCTTTTTGAGAACTTGGTGAAGCCAATTCACAAAGAGTTCAGTATTGTCTCCAAG
GAACAATTGAAGATCTTCTTCCATCTGCCCACGAGTGCGCTTGTTTGCTACCATCACCAT
GACATAGTCGGGTAGCTCATCATCTACATAACAGCCCAGTTCGGTCAGCTTAGCCTTGAT
AGCAGACCGCATTTTCTGGCCTATTTCACTTCCTACGACGTCCATTGTTTTAATACAGTA
CACAAAAATAAGCAAATATTTTTTTAAACACACACAAATGTTCTTAAAATCTATATGTAT
AATATTACTTTTAACTAGCAGAAATCACAAATTAA
(2375 bp)

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